Bioinformatics-Inspired Algorithms for 2D-Image Analysis—Application to Medical Images Part II: Images in Circular Format
This paper describes a new method of comparing images of circular/near-circular symmetry so as to elucidate the similarity details between them. If one such image is a test-entity and the other is a reference template, the comparison in question will lead to find the unique features (and their locat...
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| Vydáno v: | International journal of biomedical and clinical engineering Ročník 1; číslo 1; s. 49 - 58 |
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| Hlavní autoři: | , , |
| Médium: | Journal Article |
| Jazyk: | angličtina |
| Vydáno: |
Hershey
IGI Global
01.01.2012
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| ISSN: | 2161-1610, 2161-1629 |
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| Abstract | This paper describes a new method of comparing images of circular/near-circular symmetry so as to elucidate the similarity details between them. If one such image is a test-entity and the other is a reference template, the comparison in question will lead to find the unique features (and their locations) in the test-image vis-à-vis the template. The method of comparison and similarity assessment indicated thereof is to use the so-called Needleman-Wunsch (NW) and Smith-Waterman (SW) algorithms commonly adopted in bioinformatic contexts of comparing two linear sequences (like DNA chains). Relevant procedure is extended in this study to address 2D-patterns. It involves first transforming the test-image (of circular symmetry) from polar-plane to a rectangular format. Next, the transformed test-image is digitised and compared against a template (also in digital rectangular format) on row-to-row and column-to-column basis. The resulting alignment of pixel bits in the test-image versus the template leads to an optimal score-of-similarity on the comparisons made. Biomedical applications of the proposed strategy are explored with reference to typical and circular/quasi-circular MRI images, and the associated image recognition, interpretation, and locating of the artefacts are discussed. |
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| AbstractList | This paper describes a new method of comparing images of circular/near-circular symmetry so as to elucidate the similarity details between them. If one such image is a test-entity and the other is a reference template, the comparison in question will lead to find the unique features (and their locations) in the test-image vis-à-vis the template. The method of comparison and similarity assessment indicated thereof is to use the so-called Needleman-Wunsch (NW) and Smith-Waterman (SW) algorithms commonly adopted in bioinformatic contexts of comparing two linear sequences (like DNA chains). Relevant procedure is extended in this study to address 2D-patterns. It involves first transforming the test-image (of circular symmetry) from polar-plane to a rectangular format. Next, the transformed test-image is digitised and compared against a template (also in digital rectangular format) on row-to-row and column-to-column basis. The resulting alignment of pixel bits in the test-image versus the template leads to an optimal score-of-similarity on the comparisons made. Biomedical applications of the proposed strategy are explored with reference to typical and circular/quasi-circular MRI images, and the associated image recognition, interpretation, and locating of the artefacts are discussed. |
| Audience | Academic |
| Author | Neelakanta, Perambur S Pappusetty, Deepti Bertot, Edward M |
| AuthorAffiliation | Department of Computer and Electrical Engineering & Computer Science, Florida Atlantic University, Boca Raton, FL, USA |
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| Cites_doi | 10.1016/0022-2836(81)90087-5 10.1016/0022-2836(70)90057-4 10.1016/j.patcog.2008.04.019 10.1016/j.artmed.2005.02.008 10.4236/jbise.2011.44037 |
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| DOI | 10.4018/ijbce.2012010104 |
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| SubjectTerms | Algorithms Bioinformatics Biomedical materials Diagnostic imaging Digital imaging Format Gene sequencing Image analysis Image processing Medical imaging Medical imaging equipment Nucleotide sequence Similarity Symmetry Two dimensional analysis |
| Title | Bioinformatics-Inspired Algorithms for 2D-Image Analysis—Application to Medical Images Part II: Images in Circular Format |
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