Arctos: Community-driven innovations for managing biodiversity and cultural collections
Museum collections house millions of objects and associated data records that document biological and cultural diversity. In recent decades, digitization efforts have greatly increased accessibility to these data, thereby revolutionizing interdisciplinary studies in evolutionary biology, biogeograph...
Uloženo v:
| Vydáno v: | bioRxiv |
|---|---|
| Hlavní autoři: | , , , , , , , , , , , , , , , , , , |
| Médium: | Paper |
| Jazyk: | angličtina |
| Vydáno: |
Cold Spring Harbor
Cold Spring Harbor Laboratory Press
19.12.2023
Cold Spring Harbor Laboratory |
| Vydání: | 1.1 |
| Témata: | |
| ISSN: | 2692-8205, 2692-8205 |
| On-line přístup: | Získat plný text |
| Tagy: |
Přidat tag
Žádné tagy, Buďte první, kdo vytvoří štítek k tomuto záznamu!
|
| Abstract | Museum collections house millions of objects and associated data records that document biological and cultural diversity. In recent decades, digitization efforts have greatly increased accessibility to these data, thereby revolutionizing interdisciplinary studies in evolutionary biology, biogeography, epidemiology, cultural change, and human-mediated environmental impacts. Curators and collection managers can make museum data as accessible as possible to scientists and learners by using a collection management system. However, selecting a system can be a challenging task. Here, we describe Arctos, a community solution for managing and accessing collections data for research and education. Specific goals are to: (1) Describe the core elements of Arctos for a broad audience with respect to the biodiversity informatics principles that enable high quality research; (2) Highlight the unique aspects of Arctos; (3) Illustrate Arctos as a model for supporting and enhancing the Digital Extended Specimen; and (4) Emphasize the role of the Arctos community for improving data discovery and enabling cross-disciplinary, integrative studies within a sustainable governance model. In addition to detailing Arctos as both a community of museum professionals and a collection database platform, we discuss how Arctos achieves its richly annotated data by creating a web of knowledge with deep connections between catalog records and derived or associated data. We also highlight the value of Arctos as an educational resource. Finally, we present a financial model of fiscal sponsorship by a non-profit organization, implemented in 2022, to ensure the long-term success and sustainability of Arctos. We attribute Arctos’ longevity of nearly three decades to its core development principles of standardization, flexibility, interdisciplinarity, and connectivity within a nimble development model for addressing novel needs and information types in response to changing technology, workflows, ethical considerations, and regulations.Competing Interest StatementThe authors have declared no competing interest. |
|---|---|
| AbstractList | Museum collections house millions of objects and associated data records that document biological and cultural diversity. In recent decades, digitization efforts have greatly increased accessibility to these data, thereby revolutionizing interdisciplinary studies in evolutionary biology, biogeography, epidemiology, cultural change, and human-mediated environmental impacts. Curators and collection managers can make museum data as accessible as possible to scientists and learners by using a collection management system. However, selecting a system can be a challenging task. Here, we describe Arctos, a community solution for managing and accessing collections data for research and education. Specific goals are to: (1) Describe the core elements of Arctos for a broad audience with respect to the biodiversity informatics principles that enable high quality research; (2) Highlight the unique aspects of Arctos; (3) Illustrate Arctos as a model for supporting and enhancing the Digital Extended Specimen; and (4) Emphasize the role of the Arctos community for improving data discovery and enabling cross-disciplinary, integrative studies within a sustainable governance model. In addition to detailing Arctos as both a community of museum professionals and a collection database platform, we discuss how Arctos achieves its richly annotated data by creating a web of knowledge with deep connections between catalog records and derived or associated data. We also highlight the value of Arctos as an educational resource. Finally, we present a financial model of fiscal sponsorship by a non-profit organization, implemented in 2022, to ensure the long-term success and sustainability of Arctos. We attribute Arctos’ longevity of nearly three decades to its core development principles of standardization, flexibility, interdisciplinarity, and connectivity within a nimble development model for addressing novel needs and information types in response to changing technology, workflows, ethical considerations, and regulations.Competing Interest StatementThe authors have declared no competing interest. Museum collections house millions of objects and associated data records that document biological and cultural diversity. In recent decades, digitization efforts have greatly increased accessibility to these data, thereby revolutionizing interdisciplinary studies in evolutionary biology, biogeography, epidemiology, cultural change, and human-mediated environmental impacts. Curators and collection managers can make museum data as accessible as possible to scientists and learners by using a collection management system. However, selecting a system can be a challenging task. Here, we describe Arctos, a community solution for managing and accessing collections data for research and education. Specific goals are to: (1) Describe the core elements of Arctos for a broad audience with respect to the biodiversity informatics principles that enable high quality research; (2) Highlight the unique aspects of Arctos; (3) Illustrate Arctos as a model for supporting and enhancing the Digital Extended Specimen; and (4) Emphasize the role of the Arctos community for improving data discovery and enabling cross-disciplinary, integrative studies within a sustainable governance model. In addition to detailing Arctos as both a community of museum professionals and a collection database platform, we discuss how Arctos achieves its richly annotated data by creating a web of knowledge with deep connections between catalog records and derived or associated data. We also highlight the value of Arctos as an educational resource. Finally, we present a financial model of fiscal sponsorship by a non-profit organization, implemented in 2022, to ensure the long-term success and sustainability of Arctos. We attribute Arctos’ longevity of nearly three decades to its core development principles of standardization, flexibility, interdisciplinarity, and connectivity within a nimble development model for addressing novel needs and information types in response to changing technology, workflows, ethical considerations, and regulations. |
| Author | Linn, Angela J Doll, Andrew C Cicero, Carla Abbott, John Olson, Link E Sikes, Derek S Mcdonald, Dusty Nachman, Michael W Roberts, Dawn Wommack, Elizabeth Demboski, John R Koo, Michelle S Bloom, David Witt, Christopher C Frederick, Lindsey M Braker, Emily Mayfield-Meyer, Teresa J Campbell, Mariel Cook, Joseph A |
| Author_xml | – sequence: 1 givenname: Carla surname: Cicero fullname: Cicero, Carla – sequence: 2 givenname: Michelle surname: Koo middlename: S fullname: Koo, Michelle S – sequence: 3 givenname: Emily surname: Braker fullname: Braker, Emily – sequence: 4 givenname: John surname: Abbott fullname: Abbott, John – sequence: 5 givenname: David surname: Bloom fullname: Bloom, David – sequence: 6 givenname: Mariel surname: Campbell fullname: Campbell, Mariel – sequence: 7 givenname: Joseph surname: Cook middlename: A fullname: Cook, Joseph A – sequence: 8 givenname: John surname: Demboski middlename: R fullname: Demboski, John R – sequence: 9 givenname: Andrew surname: Doll middlename: C fullname: Doll, Andrew C – sequence: 10 givenname: Lindsey surname: Frederick middlename: M fullname: Frederick, Lindsey M – sequence: 11 givenname: Angela surname: Linn middlename: J fullname: Linn, Angela J – sequence: 12 givenname: Teresa surname: Mayfield-Meyer middlename: J fullname: Mayfield-Meyer, Teresa J – sequence: 13 givenname: Dusty surname: Mcdonald fullname: Mcdonald, Dusty – sequence: 14 givenname: Michael surname: Nachman middlename: W fullname: Nachman, Michael W – sequence: 15 givenname: Link surname: Olson middlename: E fullname: Olson, Link E – sequence: 16 givenname: Dawn surname: Roberts fullname: Roberts, Dawn – sequence: 17 givenname: Derek surname: Sikes middlename: S fullname: Sikes, Derek S – sequence: 18 givenname: Christopher surname: Witt middlename: C fullname: Witt, Christopher C – sequence: 19 givenname: Elizabeth surname: Wommack fullname: Wommack, Elizabeth |
| BookMark | eNpNkD1PwzAYhC1UJErpD2CzxMKSYL-O45itqviSKrGAGC07cSpXiV3spKL_nkAZmO6G506nu0QzH7xF6JqSnFJC74AAyynklOdc0ErKMzSHUkJWAeGzf_4CLVPaEUJAlpSJYo4-VrEeQrrH69D3o3fDMWuiO1iPnffhoAcXfMJtiLjXXm-d32LjQjMRMU0w1r7B9dgNY9QdrkPX2fo3coXOW90lu_zTBXp_fHhbP2eb16eX9WqTGUoKmRngII1spQFRlVZAxcu24pUg1BIrC90aIuvS2koLYySIgteNITWxmvKWGbZAt6feaVX8cge1j67X8ah-PlEUFOXq9MmE3pzQfQyfo02D2oUx-mmdAkmYAM5Kxr4Bif5kBw |
| Cites_doi | 10.14351/0831-4985-35.1.1 10.35638/ijih.2009..4.004 10.1111/j.1600-0587.2013.00107.x 10.1111/mec.13529 10.7717/peerj.8225 10.1371/journal.ppat.1009583 10.1371/journal.pbio.2006125 10.1186/s12052-017-0065-3 10.1017/scs.2017.13 10.1093/auk/122.3.987 10.1016/j.endeavour.2013.04.001 10.1371/journal.pone.0102623 10.1073/pnas.1701742114 10.1898/1051-1733(2006)87[80:BICAOF]2.0.CO;2 10.1371/journal.pbio.1000309 10.1038/s41467-021-22792-y 10.1038/sdata.2016.18 10.1038/s41597-020-0486-7 10.3897/zookeys.209.3313 10.1016/j.tree.2004.07.006 10.1016/j.ecoinf.2014.08.005 10.1093/biosci/biac060 10.1371/journal.pone.0178731 10.1111/jbi.12106 10.5852/ejt.2020.623 10.3897/zookeys.209.3472 10.1111/jofo.12339 10.17226/25592 10.1007/978-3-030-15200-0 10.1093/biosci/biu096 10.1126/science.aaj1945 10.1093/biosci/biass069 10.1371/journal.pgen.1008119 10.1073/pnas.1710239114 10.1016/j.tplants.2009.08.007 10.1098/rstb.2017.0391 10.1186/1472-6785-13-16 10.1093/biosci/biz140 10.7717/peerj.10799 10.1371/journal.pbio.2003318 10.1093/database/baw158 10.7717/peerj.11177 10.1093/biosci/biaa162 |
| ContentType | Paper |
| Copyright | 2023. This article is published under http://creativecommons.org/licenses/by/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. 2023, Posted by Cold Spring Harbor Laboratory |
| Copyright_xml | – notice: 2023. This article is published under http://creativecommons.org/licenses/by/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. – notice: 2023, Posted by Cold Spring Harbor Laboratory |
| DBID | 8FE 8FH ABUWG AFKRA AZQEC BBNVY BENPR BHPHI CCPQU DWQXO GNUQQ HCIFZ LK8 M7P PHGZM PHGZT PIMPY PKEHL PQEST PQGLB PQQKQ PQUKI PRINS FX. |
| DOI | 10.1101/2023.12.15.571899 |
| DatabaseName | ProQuest SciTech Collection ProQuest Natural Science Collection ProQuest Central (Alumni) ProQuest Central UK/Ireland ProQuest Central Essentials - QC Biological Science Collection Proquest Central Journals Natural Science Collection ProQuest One ProQuest Central ProQuest Central Student Proquest SciTech Premium Collection Biological Sciences ProQuest Biological Science ProQuest Central Premium ProQuest One Academic (New) Proquest Publicly Available Content Database ProQuest One Academic Middle East (New) ProQuest One Academic Eastern Edition (DO NOT USE) ProQuest One Applied & Life Sciences ProQuest One Academic (retired) ProQuest One Academic UKI Edition ProQuest Central China bioRxiv |
| DatabaseTitle | Publicly Available Content Database ProQuest Central Student ProQuest One Academic Middle East (New) ProQuest Biological Science Collection ProQuest Central Essentials ProQuest One Academic Eastern Edition ProQuest Central (Alumni Edition) SciTech Premium Collection ProQuest One Community College ProQuest Natural Science Collection Biological Science Database ProQuest SciTech Collection ProQuest Central China ProQuest Central ProQuest One Applied & Life Sciences ProQuest One Academic UKI Edition Natural Science Collection ProQuest Central Korea Biological Science Collection ProQuest Central (New) ProQuest One Academic ProQuest One Academic (New) |
| DatabaseTitleList | Publicly Available Content Database |
| Database_xml | – sequence: 1 dbid: PIMPY name: ProQuest Publicly Available Content url: http://search.proquest.com/publiccontent sourceTypes: Aggregation Database |
| DeliveryMethod | fulltext_linktorsrc |
| Discipline | Biology |
| EISSN | 2692-8205 |
| Edition | 1.1 |
| ExternalDocumentID | 2023.12.15.571899v1 |
| Genre | Working Paper/Pre-Print |
| GroupedDBID | 8FE 8FH ABUWG AFKRA ALMA_UNASSIGNED_HOLDINGS AZQEC BBNVY BENPR BHPHI CCPQU DWQXO GNUQQ HCIFZ LK8 M7P NQS PHGZM PHGZT PIMPY PKEHL PQEST PQGLB PQQKQ PQUKI PRINS PROAC RHI FX. |
| ID | FETCH-LOGICAL-b1049-b2529b9f9b2786e72856f858701e0e94afb09c6ee8a7bb92745cdb0c0ea15f3b3 |
| IEDL.DBID | M7P |
| ISSN | 2692-8205 |
| IngestDate | Tue Jan 07 18:57:33 EST 2025 Fri Jul 25 09:17:25 EDT 2025 |
| IsDoiOpenAccess | true |
| IsOpenAccess | true |
| IsPeerReviewed | false |
| IsScholarly | false |
| Language | English |
| License | This pre-print is available under a Creative Commons License (Attribution 4.0 International), CC BY 4.0, as described at http://creativecommons.org/licenses/by/4.0 |
| LinkModel | DirectLink |
| MergedId | FETCHMERGED-LOGICAL-b1049-b2529b9f9b2786e72856f858701e0e94afb09c6ee8a7bb92745cdb0c0ea15f3b3 |
| Notes | SourceType-Working Papers-1 ObjectType-Working Paper/Pre-Print-1 content type line 50 Competing Interest Statement: The authors have declared no competing interest. |
| ORCID | 0000-0002-6282-2339 0000-0003-4016-0837 0000-0003-4321-5135 0000-0003-1273-1807 0000-0002-9172-0120 0000-0002-8359-5884 0000-0002-5163-4113 |
| OpenAccessLink | https://www.proquest.com/docview/2903725363?pq-origsite=%requestingapplication% |
| PQID | 2903725363 |
| PQPubID | 2050091 |
| PageCount | 47 |
| ParticipantIDs | biorxiv_primary_2023_12_15_571899 proquest_journals_2903725363 |
| PublicationCentury | 2000 |
| PublicationDate | 20231219 |
| PublicationDateYYYYMMDD | 2023-12-19 |
| PublicationDate_xml | – month: 12 year: 2023 text: 20231219 day: 19 |
| PublicationDecade | 2020 |
| PublicationPlace | Cold Spring Harbor |
| PublicationPlace_xml | – name: Cold Spring Harbor |
| PublicationTitle | bioRxiv |
| PublicationYear | 2023 |
| Publisher | Cold Spring Harbor Laboratory Press Cold Spring Harbor Laboratory |
| Publisher_xml | – name: Cold Spring Harbor Laboratory Press – name: Cold Spring Harbor Laboratory |
| References | Hardisty (2023.12.15.571899v1.46) 2013; 13 Schindel, Cook (2023.12.15.571899v1.17) 2018; 16 Holmes, Hammond, Wogan, Walsh, LaBarbera, Wommack (2023.12.15.571899v1.9) 2016; 25 Nelson, Ellis (2023.12.15.571899v1.4) 2019; 374 Colella, Bates, Burneo, Camacho, Bonilla, Constable (2023.12.15.571899v1.45) 2021; 17 Wilkinson, Dumontier, Aalbersberg, Appleton, Axton, Baak (2023.12.15.571899v1.16) 2016; 3 Smith, Santos, Koo, Rowe, Rowe, Patton (2023.12.15.571899v1.35) 2013; 36 Graham, Ferrier, Huettman, Moritz, Peterson (2023.12.15.571899v1.8) 2004; 19 Poelen, Simons, Mungall (2023.12.15.571899v1.40) 2014; 24 Kremers (2023.12.15.571899v1.50) 2020 Marquina, Buczek, Ronquist, Łukasik (2023.12.15.571899v1.24) 2021; 9 Lendemer, Thiers, Monfils, Zaspel, Ellwood, Bentley, LeVan, Bates, Jennings, Contreras, Lagomarsino, Mabee, Ford, Guralnick, Gropp, Revelez, Cobb, Seltmann, Aime (2023.12.15.571899v1.13) 2020; 70 Bardua, Bon, Fabre, Clavel, Das, Herrel (2023.12.15.571899v1.31) 2021; 12 Hollinger, Jr, Jacobs, Moran-Collins, Thome, Zastrow (2023.12.15.571899v1.28) 2013; 7 (2023.12.15.571899v1.44) 2020 Adams, Strganac, Polcyn, Jacobs (2023.12.15.571899v1.27) 2010; 13 Brecko, Mathys (2023.12.15.571899v1.29) 2020; 623 Sunderland (2023.12.15.571899v1.2) 2013; 37 Bates, Cicero, Peterson, Wieczorek, Zermoglio (2023.12.15.571899v1.15) 2021 Vermeylen, Pilcher (2023.12.15.571899v1.49) 2009; 4 Bakker, Antonelli, Clarke, Cook, Edwards, Ericson (2023.12.15.571899v1.5) 2020; 8 Paton (2023.12.15.571899v1.38) 2009; 14 Lin, Crabtree, Dillo, Downs, Edmunds, Giaretta (2023.12.15.571899v1.51) 2020; 7 Zimkus, Ford, Morris (2023.12.15.571899v1.33) 2021; 35 Bell, Demboski, Cook (2023.12.15.571899v1.42) 2018; 192 Johnson, Druckenmiller, Danielsen, Pulsifer (2023.12.15.571899v1.52) 2021; 71 Ogle, Koo (2023.12.15.571899v1.19) 2016 Boyer, Gunnell, Kaufman, McGeary (2023.12.15.571899v1.32) 2016; 22 Peterson, Cicero, Wieczorek (2023.12.15.571899v1.1) 2005; 122 Bi, Linderoth, Singhal, Vanderpool, Patton, Nielsen (2023.12.15.571899v1.41) 2019; 15 Constable, Guralnick, Wieczorek, Spencer, Peterson (2023.12.15.571899v1.14) 2010; 8 Miller, Barrow, Ehlman, Goodheart, Greiman, Lutz (2023.12.15.571899v1.6) 2020; 70 Viega, Saraiva, Chapman, Morris, Gendreau, Schigel (2023.12.15.571899v1.22) 2017; 12 Hauber, Kim, Goethe, Hanley (2023.12.15.571899v1.26) 2020; 91 2023.12.15.571899v1.20 Dubay, Fuldner (2023.12.15.571899v1.30) 2017; 114 McGuire, Davis (2023.12.15.571899v1.34) 2013 Hardisty, Ellwood, Nelson, Zimkus, Buschbom, Addink (2023.12.15.571899v1.18) 2022; 72 Hill, Guralnick, Smith, Sallans, Gillespie, Denslow (2023.12.15.571899v1.7) 2012; 209 Simmons (2023.12.15.571899v1.23) 2014 Guralnick, Zermoglio, Wieczorek, LaFrance, Bloom, Russell (2023.12.15.571899v1.37) 2016;2016 Pauli, Newsome, Cook, Harrod, Steffan, Baker (2023.12.15.571899v1.39) 2017; 114 Kagan (2023.12.15.571899v1.47) 2006; 87 Lacey, Hammond, Mast, Guralnick, Monfils, McCormack (2023.12.15.571899v1.10) 2017; 10 Webster (2023.12.15.571899v1.12) 2017; 50 Stoddard, Yong, Akkaynak, Sheard, Tobias, Mahadevan (2023.12.15.571899v1.25) 2017; 6344 Robertson, Döring, Guralnick, Bloom, Wieczorek, Braak (2023.12.15.571899v1.21) 2014; 9 Beaman, Cellinese (2023.12.15.571899v1.48) 2012; 209 Cicero, Spencer, Bloom, Guralnick, Koo, Otegui, Russell, Wieczorek (2023.12.15.571899v1.11) 2017; 50 Hiller, Cicero, Able, Barclay, Spencer, Koo (2023.12.15.571899v1.43) 2017; 15 Cook, Edwards, Lacey, Guralnick, Soltis, Soltis (2023.12.15.571899v1.3) 2014; 64 Wieringa, Carstens, Gibbs (2023.12.15.571899v1.36) 2021; 9 |
| References_xml | – volume: 35 start-page: 1 year: 2021 end-page: 20 ident: 2023.12.15.571899v1.33 article-title: The need for permit management within biodiversity collection management systems to digitally track legal compliance documentation and increase transparency about origins and uses publication-title: Collection Forum doi: 10.14351/0831-4985-35.1.1 – volume: 4 start-page: 49 year: 2009 end-page: 63 ident: 2023.12.15.571899v1.49 article-title: Let artifacts speak: Online museums and intangible cultural heritage publication-title: Int J Intang Heritage doi: 10.35638/ijih.2009..4.004 – volume: 50 year: 2017 ident: 2023.12.15.571899v1.12 publication-title: Boca Raton: Studies in Avian Biology – volume: 36 start-page: 1017 year: 2013 end-page: 1031 ident: 2023.12.15.571899v1.35 article-title: Evaluation of species distribution models by resampling of sites surveyed a century ago by Joseph Grinnell publication-title: Ecography doi: 10.1111/j.1600-0587.2013.00107.x – volume: 25 start-page: 864 year: 2016 end-page: 881 ident: 2023.12.15.571899v1.9 article-title: Natural history collections as windows on evolutionary processes publication-title: Mol Ecol doi: 10.1111/mec.13529 – volume: 8 start-page: e8225 year: 2020 ident: 2023.12.15.571899v1.5 article-title: The Global Museum: natural history collections and the future of evolutionary science and public education publication-title: PeerJ doi: 10.7717/peerj.8225 – volume: 17 start-page: e1009583 year: 2021 ident: 2023.12.15.571899v1.45 article-title: Leveraging natural history biorepositories as a global, decentralized, pathogen surveillance network publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1009583 – volume: 16 start-page: e2006125 year: 2018 ident: 2023.12.15.571899v1.17 article-title: The next generation of natural history collections publication-title: PLoS Biol doi: 10.1371/journal.pbio.2006125 – volume: 10 start-page: 2 year: 2017 ident: 2023.12.15.571899v1.10 article-title: Climate change, collections and the classroom: Using big data to tackle big problems publication-title: Evolution: Education and Outreach doi: 10.1186/s12052-017-0065-3 – volume: 22 start-page: 157 year: 2016 end-page: 181 ident: 2023.12.15.571899v1.32 article-title: Morphosource: Archiving and sharing 3-D digital specimen data publication-title: The Paleontological Society Papers doi: 10.1017/scs.2017.13 – volume: 122 start-page: 987 year: 2005 end-page: 990 ident: 2023.12.15.571899v1.1 article-title: Free and open access to bird specimen data: Why? publication-title: The Auk doi: 10.1093/auk/122.3.987 – volume: 37 start-page: 150 year: 2013 end-page: 161 ident: 2023.12.15.571899v1.2 article-title: Computerizing natural history collections publication-title: Endeavour doi: 10.1016/j.endeavour.2013.04.001 – volume: 13 start-page: 1T year: 2010 ident: 2023.12.15.571899v1.27 article-title: High resolution three-dimensional laser-scanning of the type specimen of Eubrontes (?) glenrosensis Shuler, 1935, from the Comanchean (Lower Cretaceous) of Texas: Implications for digital archiving and preservation publication-title: Palaeontol Electronica – volume: 9 start-page: e102623 year: 2014 ident: 2023.12.15.571899v1.21 article-title: The GBIF Integrated Publishing Toolkit: Facilitating the efficient publishing of biodiversity data on the internet publication-title: PLoS ONE doi: 10.1371/journal.pone.0102623 – volume: 114 start-page: 2997 year: 2017 end-page: 3001 ident: 2023.12.15.571899v1.39 article-title: Opinion: Why we need a centralized repository for isotopic data publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.1701742114 – volume: 87 start-page: 80 year: 2006 end-page: 85 ident: 2023.12.15.571899v1.47 article-title: Biodiversity informatics: Challenges and opportunities for applying biodiversity information to management and conservation publication-title: Northwest Nat doi: 10.1898/1051-1733(2006)87[80:BICAOF]2.0.CO;2 – volume: 50 start-page: 201 year: 2017 end-page: 218 ident: 2023.12.15.571899v1.11 publication-title: Boca Raton: Studies in Avian Biology – volume: 8 start-page: e1000309 year: 2010 ident: 2023.12.15.571899v1.14 article-title: The VertNet Steering Committee. VertNet: A new model for biodiversity data sharing publication-title: PLoS Biology doi: 10.1371/journal.pbio.1000309 – volume: 12 start-page: 2503 year: 2021 ident: 2023.12.15.571899v1.31 article-title: Size, microhabitat, and loss of larval feeding drive cranial diversification in frogs publication-title: Nat Commun doi: 10.1038/s41467-021-22792-y – volume: 3 start-page: 1 year: 2016 end-page: 9 ident: 2023.12.15.571899v1.16 article-title: The FAIR guiding principles for scientific data management and stewardship publication-title: Scientific data doi: 10.1038/sdata.2016.18 – year: 2016 ident: 2023.12.15.571899v1.19 article-title: Database evolution. Berkeley: Berkeley Natural History Museums [Internet] – volume: 7 start-page: 144 year: 2020 ident: 2023.12.15.571899v1.51 article-title: The TRUST Principles for digital repositories publication-title: Scientific Data doi: 10.1038/s41597-020-0486-7 – volume: 209 start-page: 7 year: 2012 end-page: 17 ident: 2023.12.15.571899v1.48 article-title: Mass digitization of scientific collections: New opportunities to transform the use of biological specimens and underwrite biodiversity science publication-title: Zookeys doi: 10.3897/zookeys.209.3313 – volume: 192 start-page: E106 year: 2018 end-page: E119 ident: 2023.12.15.571899v1.42 article-title: Sympatric parasites have similar host-associated, but asynchronous, patterns of diversification publication-title: Am Nat – volume: 19 start-page: 497 year: 2004 end-page: 503 ident: 2023.12.15.571899v1.8 article-title: New developments in museum-based informatics and applications in biodiversity analysis publication-title: Trends Ecol Evol doi: 10.1016/j.tree.2004.07.006 – volume: 24 start-page: 148 year: 2014 end-page: 159 ident: 2023.12.15.571899v1.40 article-title: Global biotic interactions: An open infrastructure to share and analyze species-interaction datasets publication-title: Ecol Inform doi: 10.1016/j.ecoinf.2014.08.005 – volume: 72 start-page: 978 year: 2022 end-page: 987 ident: 2023.12.15.571899v1.18 article-title: Digital extended specimens: Enabling an extensible network of biodiversity data records as integrated digital objects on the internet publication-title: BioScience doi: 10.1093/biosci/biac060 – volume: 12 start-page: e0178731 year: 2017 ident: 2023.12.15.571899v1.22 article-title: A conceptual framework for quality assessment and management of biodiversity data publication-title: PLoS ONE doi: 10.1371/journal.pone.0178731 – start-page: 1490 year: 2013 end-page: 1500 ident: 2023.12.15.571899v1.34 article-title: Using the palaeontological record of Microtus to test species distribution models and reveal responses to climate change publication-title: J Biogeogr doi: 10.1111/jbi.12106 – volume: 623 year: 2020 ident: 2023.12.15.571899v1.29 article-title: Handbook of best practice and standards for 2D+ and 3D imaging of natural history collections publication-title: Eur J Taxon doi: 10.5852/ejt.2020.623 – year: 2021 ident: 2023.12.15.571899v1.15 article-title: Making bird specimen data more consistent, accessible, and informative publication-title: Abstract, Joint Meeting of the American Ornithological Society and Canadian Society of Ornithologists – volume: 209 start-page: 219 year: 2012 end-page: 233 ident: 2023.12.15.571899v1.7 article-title: The notes from nature tool for unlocking biodiversity records from museum records through citizen science publication-title: ZooKeys doi: 10.3897/zookeys.209.3472 – volume: 91 start-page: 254 year: 2020 end-page: 262 ident: 2023.12.15.571899v1.26 article-title: Self-referent phenotype matching is a poor predictor of egg rejection by American Robins publication-title: J Field Ornithol doi: 10.1111/jofo.12339 – year: 2020 ident: 2023.12.15.571899v1.44 doi: 10.17226/25592 – year: 2020 ident: 2023.12.15.571899v1.50 article-title: Digital cultural heritage publication-title: Cham: Springer Nature Switzerland doi: 10.1007/978-3-030-15200-0 – ident: 2023.12.15.571899v1.20 article-title: Virtual private database – volume: 64 start-page: 725 year: 2014 end-page: 734 ident: 2023.12.15.571899v1.3 article-title: Natural History Collections as Emerging Resources for Innovative Education publication-title: BioScience doi: 10.1093/biosci/biu096 – volume: 6344 start-page: 1249 year: 2017 end-page: 1254 ident: 2023.12.15.571899v1.25 article-title: Avian egg shape: Form, function and evolution publication-title: Science doi: 10.1126/science.aaj1945 – volume: 70 start-page: 674 year: 2020 end-page: 687 ident: 2023.12.15.571899v1.6 article-title: Building natural history collections for the twenty-first century and beyond publication-title: BioScience doi: 10.1093/biosci/biass069 – volume: 15 start-page: e1008119 year: 2019 ident: 2023.12.15.571899v1.41 article-title: Temporal genomic contrasts reveal rapid evolutionary responses in an alpine mammal during recent climate change publication-title: PLoS Genet doi: 10.1371/journal.pgen.1008119 – volume: 114 start-page: 11321 year: 2017 end-page: 11326 ident: 2023.12.15.571899v1.30 article-title: Bird specimens track 135 years of atmospheric black carbon and environmental policy publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.1710239114 – volume: 14 start-page: 629 year: 2009 end-page: 637 ident: 2023.12.15.571899v1.38 article-title: Biodiversity informatics and the plant conservation baseline publication-title: Trends Plant Sci doi: 10.1016/j.tplants.2009.08.007 – volume: 374 start-page: 20170391 year: 2019 ident: 2023.12.15.571899v1.4 article-title: The history and impact of digitization and digital data mobilization on biodiversity research publication-title: Philos Trans R Soc B doi: 10.1098/rstb.2017.0391 – volume: 13 start-page: 16 year: 2013 ident: 2023.12.15.571899v1.46 article-title: Roberts D, and the Biodiversity Informatics Community. A decadal view of biodiversity informatics: challenges and priorities publication-title: BMC Ecol doi: 10.1186/1472-6785-13-16 – volume: 70 start-page: 23 year: 2020 end-page: 30 ident: 2023.12.15.571899v1.13 article-title: The extended specimen network: A strategy to enhance US biodiversity collections, promote research and education publication-title: BioScience doi: 10.1093/biosci/biz140 – volume: 9 start-page: e10799 year: 2021 ident: 2023.12.15.571899v1.24 article-title: The effect of ethanol concentration on the molecular and morphological preservation of insects for biodiversity studies publication-title: PeerJ doi: 10.7717/peerj.10799 – year: 2014 ident: 2023.12.15.571899v1.23 – volume: 15 start-page: e2003318 year: 2017 ident: 2023.12.15.571899v1.43 article-title: Mutualism in museums: A model for engaging undergraduates in biodiversity science publication-title: PLoS Biol doi: 10.1371/journal.pbio.2003318 – volume: 7 year: 2013 ident: 2023.12.15.571899v1.28 article-title: Tlingit-Smithsonian collaborations with 3D digitization of cultural objects publication-title: Museum Anthropology Review – start-page: baw158 year: 2016;2016 ident: 2023.12.15.571899v1.37 article-title: The importance of digitized biocollections as a source of trait data and a new VertNet resource publication-title: Database doi: 10.1093/database/baw158 – volume: 9 start-page: e11177 year: 2021 ident: 2023.12.15.571899v1.36 article-title: Predicting migration routes for three species of migratory bats using species distribution models publication-title: PeerJ doi: 10.7717/peerj.11177 – volume: 71 start-page: 452 year: 2021 end-page: 466 ident: 2023.12.15.571899v1.52 article-title: The use of digital platforms for community-based monitoring publication-title: BioScience doi: 10.1093/biosci/biaa162 |
| SSID | ssj0002961374 |
| Score | 1.7082671 |
| SecondaryResourceType | preprint |
| Snippet | Museum collections house millions of objects and associated data records that document biological and cultural diversity. In recent decades, digitization... |
| SourceID | biorxiv proquest |
| SourceType | Open Access Repository Aggregation Database |
| SubjectTerms | Biodiversity Biogeography Bioinformatics Developmental biology Epidemiology Informatics Museums Standardization |
| Title | Arctos: Community-driven innovations for managing biodiversity and cultural collections |
| URI | https://www.proquest.com/docview/2903725363 https://www.biorxiv.org/content/10.1101/2023.12.15.571899 |
| hasFullText | 1 |
| inHoldings | 1 |
| isFullTextHit | |
| isPrint | |
| link | http://cvtisr.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwpV3PS8MwFA66KXjyN07niOC12iZN23gRlQ0FHUX8MU8lr02hB9vZ1uH-e5MunQfBi8dQCOHlvS99L1_eh9ApxFIEqUI_sKlrucIHS4AvLCDETqkHTDb1jpd7fzwOJhMemoJbZWiVLSY2QJ0Usa6RnxNuU58w6tHL6YelVaP07aqR0FhFXd0lgTbUvXBZYyFcHVZNI2bicRX4xGbmYlM5ok77qS4FOuyMKYTW3V_XISvKr2z2C5ib02a0-d91bqFuKKay3EYrMt9B6wu9yfkuer0q47qoLrB5FlLPraTUcIezpThqhdVvLH438kVYLTVpqRtY5AluW3Vg7UENjyuv9tDzaPh0c2sZZQULVPrF1U4wwoGnHIgfeNInAfPSgKnYdaQtuStSsHnsSRmozQOuMlcWJ2DHthQOSynQfdTJi1weIExoClQwASIRri_dINavgT1XgagAAl4PnRijRtNF_4xIGz5ySOSwaGH4Huq3toxMCFXRjyEP__58hDb0jJpj4vA-6tTlpzxGa_GszqpygLrXw3H4OGg8Q43Cu4fw7RvVhMHC |
| linkProvider | ProQuest |
| linkToHtml | http://cvtisr.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMw1V1LT9wwEB4tLAhOtDzE0m1xpXIMJHacxEio6gMEYrtaIV634EkcaQ9kl2SB7p_qb2ScTegBiRsHzpEs29_4m3g8Mx_AN0yMjjJiP3SF7_g6REdjqB3k3M1EgNJU8Y7LXtjvR9fXatCCf00tjE2rbDixIup0lNgY-R5Xrgi5FIH4Pr5zrGqUfV1tJDRmZnFqpo90ZSsPTn4TvjucHx2e_zp2alUBB-nqoWgWkitUmUIeRoEJeSSDLJJkt55xjfJ1hq5KAmMimjgqurXJJEU3cY32ZCZQ0Lhz0PaFH9K5av887A_OnqM6XJF7rFo_80AR1XBX1k-pZPo20CBs8NGTu5J8gu03u4jDUfF3-PDCFVT-7Wjlve3MB2gP9NgUH6Fl8lVYnClqTtfg6keRTEblPqsLXyZTJy0sobPhs_xryehHnd3WAk2MtiZtklOYzlPWNCNh9oxUmWp5uQ4Xb7KWDZjPR7nZBMZFhkJLjTrVfmj8KLH1zoFPbkIjx6ADX2sQ4_GsQ0hsgY49HnsyngHdgW6DXVyTRBn_B27r9c_bsHR8_qcX9076p59g2Y5uM2o81YX5SXFvPsNC8jAZlsWX2h4Z3Lw10E9CcRx0 |
| openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Arctos%3A+Community-driven+innovations+for+managing+biodiversity+and+cultural+collections&rft.jtitle=bioRxiv&rft.au=Cicero%2C+Carla&rft.au=Koo%2C+Michelle+S.&rft.au=Braker%2C+Emily&rft.au=Abbott%2C+John&rft.date=2023-12-19&rft.pub=Cold+Spring+Harbor+Laboratory&rft.eissn=2692-8205&rft_id=info:doi/10.1101%2F2023.12.15.571899&rft.externalDocID=2023.12.15.571899v1 |
| thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2692-8205&client=summon |
| thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2692-8205&client=summon |
| thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2692-8205&client=summon |