Psi4 1.1: An Open-Source Electronic Structure Program Emphasizing Automation, Advanced Libraries, and Interoperability

Psi4 is an ab initio electronic structure program providing methods such as Hartree-Fock, density functional theory, configuration interaction, and coupled-cluster theory. The 1.1 release represents a major update meant to automate complex tasks, such as geometry optimization using complete-basis-se...

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Vydané v:Journal of chemical theory and computation Ročník 13; číslo 7; s. 3185
Hlavní autori: Parrish, Robert M, Burns, Lori A, Smith, Daniel G A, Simmonett, Andrew C, DePrince, 3rd, A Eugene, Hohenstein, Edward G, Bozkaya, Uğur, Sokolov, Alexander Yu, Di Remigio, Roberto, Richard, Ryan M, Gonthier, Jérôme F, James, Andrew M, McAlexander, Harley R, Kumar, Ashutosh, Saitow, Masaaki, Wang, Xiao, Pritchard, Benjamin P, Verma, Prakash, Schaefer, 3rd, Henry F, Patkowski, Konrad, King, Rollin A, Valeev, Edward F, Evangelista, Francesco A, Turney, Justin M, Crawford, T Daniel, Sherrill, C David
Médium: Journal Article
Jazyk:English
Vydavateľské údaje: United States 11.07.2017
ISSN:1549-9626, 1549-9626
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Abstract Psi4 is an ab initio electronic structure program providing methods such as Hartree-Fock, density functional theory, configuration interaction, and coupled-cluster theory. The 1.1 release represents a major update meant to automate complex tasks, such as geometry optimization using complete-basis-set extrapolation or focal-point methods. Conversion of the top-level code to a Python module means that Psi4 can now be used in complex workflows alongside other Python tools. Several new features have been added with the aid of libraries providing easy access to techniques such as density fitting, Cholesky decomposition, and Laplace denominators. The build system has been completely rewritten to simplify interoperability with independent, reusable software components for quantum chemistry. Finally, a wide range of new theoretical methods and analyses have been added to the code base, including functional-group and open-shell symmetry adapted perturbation theory, density-fitted coupled cluster with frozen natural orbitals, orbital-optimized perturbation and coupled-cluster methods (e.g., OO-MP2 and OO-LCCD), density-fitted multiconfigurational self-consistent field, density cumulant functional theory, algebraic-diagrammatic construction excited states, improvements to the geometry optimizer, and the "X2C" approach to relativistic corrections, among many other improvements.
AbstractList Psi4 is an ab initio electronic structure program providing methods such as Hartree-Fock, density functional theory, configuration interaction, and coupled-cluster theory. The 1.1 release represents a major update meant to automate complex tasks, such as geometry optimization using complete-basis-set extrapolation or focal-point methods. Conversion of the top-level code to a Python module means that Psi4 can now be used in complex workflows alongside other Python tools. Several new features have been added with the aid of libraries providing easy access to techniques such as density fitting, Cholesky decomposition, and Laplace denominators. The build system has been completely rewritten to simplify interoperability with independent, reusable software components for quantum chemistry. Finally, a wide range of new theoretical methods and analyses have been added to the code base, including functional-group and open-shell symmetry adapted perturbation theory, density-fitted coupled cluster with frozen natural orbitals, orbital-optimized perturbation and coupled-cluster methods (e.g., OO-MP2 and OO-LCCD), density-fitted multiconfigurational self-consistent field, density cumulant functional theory, algebraic-diagrammatic construction excited states, improvements to the geometry optimizer, and the "X2C" approach to relativistic corrections, among many other improvements.
Psi4 is an ab initio electronic structure program providing methods such as Hartree-Fock, density functional theory, configuration interaction, and coupled-cluster theory. The 1.1 release represents a major update meant to automate complex tasks, such as geometry optimization using complete-basis-set extrapolation or focal-point methods. Conversion of the top-level code to a Python module means that Psi4 can now be used in complex workflows alongside other Python tools. Several new features have been added with the aid of libraries providing easy access to techniques such as density fitting, Cholesky decomposition, and Laplace denominators. The build system has been completely rewritten to simplify interoperability with independent, reusable software components for quantum chemistry. Finally, a wide range of new theoretical methods and analyses have been added to the code base, including functional-group and open-shell symmetry adapted perturbation theory, density-fitted coupled cluster with frozen natural orbitals, orbital-optimized perturbation and coupled-cluster methods (e.g., OO-MP2 and OO-LCCD), density-fitted multiconfigurational self-consistent field, density cumulant functional theory, algebraic-diagrammatic construction excited states, improvements to the geometry optimizer, and the "X2C" approach to relativistic corrections, among many other improvements.Psi4 is an ab initio electronic structure program providing methods such as Hartree-Fock, density functional theory, configuration interaction, and coupled-cluster theory. The 1.1 release represents a major update meant to automate complex tasks, such as geometry optimization using complete-basis-set extrapolation or focal-point methods. Conversion of the top-level code to a Python module means that Psi4 can now be used in complex workflows alongside other Python tools. Several new features have been added with the aid of libraries providing easy access to techniques such as density fitting, Cholesky decomposition, and Laplace denominators. The build system has been completely rewritten to simplify interoperability with independent, reusable software components for quantum chemistry. Finally, a wide range of new theoretical methods and analyses have been added to the code base, including functional-group and open-shell symmetry adapted perturbation theory, density-fitted coupled cluster with frozen natural orbitals, orbital-optimized perturbation and coupled-cluster methods (e.g., OO-MP2 and OO-LCCD), density-fitted multiconfigurational self-consistent field, density cumulant functional theory, algebraic-diagrammatic construction excited states, improvements to the geometry optimizer, and the "X2C" approach to relativistic corrections, among many other improvements.
Author McAlexander, Harley R
Sherrill, C David
Burns, Lori A
Pritchard, Benjamin P
Kumar, Ashutosh
Saitow, Masaaki
Verma, Prakash
Schaefer, 3rd, Henry F
Simmonett, Andrew C
Turney, Justin M
Valeev, Edward F
Smith, Daniel G A
Wang, Xiao
Crawford, T Daniel
Bozkaya, Uğur
Richard, Ryan M
Patkowski, Konrad
James, Andrew M
DePrince, 3rd, A Eugene
Evangelista, Francesco A
King, Rollin A
Sokolov, Alexander Yu
Parrish, Robert M
Di Remigio, Roberto
Gonthier, Jérôme F
Hohenstein, Edward G
Author_xml – sequence: 1
  givenname: Robert M
  surname: Parrish
  fullname: Parrish, Robert M
  organization: Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, School of Computational Science and Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States
– sequence: 2
  givenname: Lori A
  orcidid: 0000-0003-2852-5864
  surname: Burns
  fullname: Burns, Lori A
  organization: Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, School of Computational Science and Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States
– sequence: 3
  givenname: Daniel G A
  surname: Smith
  fullname: Smith, Daniel G A
  organization: Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, School of Computational Science and Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States
– sequence: 4
  givenname: Andrew C
  orcidid: 0000-0002-5921-9272
  surname: Simmonett
  fullname: Simmonett, Andrew C
  organization: National Institutes of Health , National Heart, Lung and Blood Institute, Laboratory of Computational Biology, 5635 Fishers Lane, T-900 Suite, Rockville, Maryland 20852, United States
– sequence: 5
  givenname: A Eugene
  surname: DePrince, 3rd
  fullname: DePrince, 3rd, A Eugene
  organization: Department of Chemistry and Biochemistry, Florida State University , Tallahassee, Florida 32306-4390, United States
– sequence: 6
  givenname: Edward G
  orcidid: 0000-0002-2119-2959
  surname: Hohenstein
  fullname: Hohenstein, Edward G
  organization: Department of Chemistry and Biochemistry, The City College of New York , New York, New York 10031, United States
– sequence: 7
  givenname: Uğur
  surname: Bozkaya
  fullname: Bozkaya, Uğur
  organization: Department of Chemistry, Hacettepe University , Ankara 06800, Turkey
– sequence: 8
  givenname: Alexander Yu
  surname: Sokolov
  fullname: Sokolov, Alexander Yu
  organization: Division of Chemistry and Chemical Engineering, California Institute of Technology , Pasadena, California 91125, United States
– sequence: 9
  givenname: Roberto
  orcidid: 0000-0002-5452-9239
  surname: Di Remigio
  fullname: Di Remigio, Roberto
  organization: Department of Chemistry, Centre for Theoretical and Computational Chemistry, UiT, The Arctic University of Norway , N-9037 Tromsø, Norway
– sequence: 10
  givenname: Ryan M
  surname: Richard
  fullname: Richard, Ryan M
  organization: Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, School of Computational Science and Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States
– sequence: 11
  givenname: Jérôme F
  surname: Gonthier
  fullname: Gonthier, Jérôme F
  organization: Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, School of Computational Science and Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States
– sequence: 12
  givenname: Andrew M
  surname: James
  fullname: James, Andrew M
  organization: Department of Chemistry, Virginia Tech , Blacksburg, Virginia 24061, United States
– sequence: 13
  givenname: Harley R
  surname: McAlexander
  fullname: McAlexander, Harley R
  organization: Department of Chemistry, Virginia Tech , Blacksburg, Virginia 24061, United States
– sequence: 14
  givenname: Ashutosh
  surname: Kumar
  fullname: Kumar, Ashutosh
  organization: Department of Chemistry, Virginia Tech , Blacksburg, Virginia 24061, United States
– sequence: 15
  givenname: Masaaki
  surname: Saitow
  fullname: Saitow, Masaaki
  organization: Department of Chemistry and Research Center for Smart Molecules, Rikkyo University , 3-34-1 Nishi-ikebukuro, Toshima-ku, Tokyo 171-8501, Japan
– sequence: 16
  givenname: Xiao
  surname: Wang
  fullname: Wang, Xiao
  organization: Department of Chemistry, Virginia Tech , Blacksburg, Virginia 24061, United States
– sequence: 17
  givenname: Benjamin P
  surname: Pritchard
  fullname: Pritchard, Benjamin P
  organization: Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, School of Computational Science and Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States
– sequence: 18
  givenname: Prakash
  surname: Verma
  fullname: Verma, Prakash
  organization: Department of Chemistry, Emory University , Atlanta, Georgia 30322, United States
– sequence: 19
  givenname: Henry F
  orcidid: 0000-0003-0252-2083
  surname: Schaefer, 3rd
  fullname: Schaefer, 3rd, Henry F
  organization: Center for Computational Quantum Chemistry, University of Georgia , Athens, Georgia 30602, United States
– sequence: 20
  givenname: Konrad
  surname: Patkowski
  fullname: Patkowski, Konrad
  organization: Department of Chemistry and Biochemistry, Auburn University , Auburn, Alabama 36849, United States
– sequence: 21
  givenname: Rollin A
  orcidid: 0000-0002-1173-4187
  surname: King
  fullname: King, Rollin A
  organization: Department of Chemistry, Bethel University , St. Paul, Minnesota 55112, United States
– sequence: 22
  givenname: Edward F
  orcidid: 0000-0001-9923-6256
  surname: Valeev
  fullname: Valeev, Edward F
  organization: Department of Chemistry, Virginia Tech , Blacksburg, Virginia 24061, United States
– sequence: 23
  givenname: Francesco A
  surname: Evangelista
  fullname: Evangelista, Francesco A
  organization: Department of Chemistry, Emory University , Atlanta, Georgia 30322, United States
– sequence: 24
  givenname: Justin M
  surname: Turney
  fullname: Turney, Justin M
  organization: Center for Computational Quantum Chemistry, University of Georgia , Athens, Georgia 30602, United States
– sequence: 25
  givenname: T Daniel
  orcidid: 0000-0002-7961-7016
  surname: Crawford
  fullname: Crawford, T Daniel
  organization: Department of Chemistry, Virginia Tech , Blacksburg, Virginia 24061, United States
– sequence: 26
  givenname: C David
  orcidid: 0000-0002-5570-7666
  surname: Sherrill
  fullname: Sherrill, C David
  organization: Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, School of Computational Science and Engineering, Georgia Institute of Technology , Atlanta, Georgia 30332-0400, United States
BackLink https://www.ncbi.nlm.nih.gov/pubmed/28489372$$D View this record in MEDLINE/PubMed
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