Trapping of the Enoyl-Acyl Carrier Protein Reductase-Acyl Carrier Protein Interaction
An ideal target for metabolic engineering, fatty acid biosynthesis remains poorly understood on a molecular level. These carrier protein-dependent pathways require fundamental protein Protein interactions to guide reactivity and processivity, and their control has become one of the major hurdles in...
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| Vydáno v: | Journal of the American Chemical Society Ročník 138; číslo 12; s. 3962 - 3965 |
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| Médium: | Journal Article |
| Jazyk: | angličtina |
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WASHINGTON
Amer Chemical Soc
30.03.2016
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| ISSN: | 0002-7863, 1520-5126 |
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| Abstract | An ideal target for metabolic engineering, fatty acid biosynthesis remains poorly understood on a molecular level. These carrier protein-dependent pathways require fundamental protein Protein interactions to guide reactivity and processivity, and their control has become one of the major hurdles in successfully adapting these biological machines. Our laboratory has developed methods to prepare acyl carrier proteins (ACPs) loaded with substrate mimetics and cross-linkers to visualize and trap interactions with partner enzymes, and we continue to expand the tools for studying these pathways. We now describe application of the slow-onset, tight-binding inhibitor triclosan to explore the interactions between the type II fatty acid ACP from Escherichia coli, AcpP,, and its corresponding enoyl-ACP Teductase, FabI. We show that the AcpP-triclosan complex demonstrates nM binding, inhibits in vitro activity, and can be used to isolate FabI in complex proteomes. |
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| AbstractList | An ideal target for metabolic engineering, fatty acid biosynthesis remains poorly understood on a molecular level. These carrier protein-dependent pathways require fundamental protein Protein interactions to guide reactivity and processivity, and their control has become one of the major hurdles in successfully adapting these biological machines. Our laboratory has developed methods to prepare acyl carrier proteins (ACPs) loaded with substrate mimetics and cross-linkers to visualize and trap interactions with partner enzymes, and we continue to expand the tools for studying these pathways. We now describe application of the slow-onset, tight-binding inhibitor triclosan to explore the interactions between the type II fatty acid ACP from Escherichia coli, AcpP,, and its corresponding enoyl-ACP Teductase, FabI. We show that the AcpP-triclosan complex demonstrates nM binding, inhibits in vitro activity, and can be used to isolate FabI in complex proteomes. An ideal target for metabolic engineering, fatty acid biosynthesis remains poorly understood on a molecular level. These carrier protein-dependent pathways require fundamental protein-protein interactions to guide reactivity and processivity, and their control has become one of the major hurdles in successfully adapting these biological machines. Our laboratory has developed methods to prepare acyl carrier proteins (ACPs) loaded with substrate mimetics and cross-linkers to visualize and trap interactions with partner enzymes, and we continue to expand the tools for studying these pathways. We now describe application of the slow-onset, tight-binding inhibitor triclosan to explore the interactions between the type II fatty acid ACP from Escherichia coli, AcpP, and its corresponding enoyl-ACP reductase, FabI. We show that the AcpP-triclosan complex demonstrates nM binding, inhibits in vitro activity, and can be used to isolate FabI in complex proteomes. |
| Author | Finzel, Kara Beld, Joris Burkart, Michael D. Tallorin, Lorillee La Clair, James J. Nguyen, Quynh G. |
| Author_xml | – sequence: 1 givenname: Lorillee surname: Tallorin fullname: Tallorin, Lorillee organization: Univ Calif San Diego, Dept Chem & Biochem, 9500 Gilman Dr, La Jolla, CA 92093 USA – sequence: 2 givenname: Kara surname: Finzel fullname: Finzel, Kara organization: Univ Calif San Diego, Dept Chem & Biochem, 9500 Gilman Dr, La Jolla, CA 92093 USA – sequence: 3 givenname: Quynh G. surname: Nguyen fullname: Nguyen, Quynh G. organization: Univ Calif San Diego, Dept Chem & Biochem, 9500 Gilman Dr, La Jolla, CA 92093 USA – sequence: 4 givenname: Joris surname: Beld fullname: Beld, Joris organization: Univ Calif San Diego, Dept Chem & Biochem, 9500 Gilman Dr, La Jolla, CA 92093 USA – sequence: 5 givenname: James J. surname: La Clair fullname: La Clair, James J. organization: Univ Calif San Diego, Dept Chem & Biochem, 9500 Gilman Dr, La Jolla, CA 92093 USA – sequence: 6 givenname: Michael D. surname: Burkart fullname: Burkart, Michael D. email: mburkart@ucsd.edu organization: Univ Calif San Diego, Dept Chem & Biochem, 9500 Gilman Dr, La Jolla, CA 92093 USA |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/26938266$$D View this record in MEDLINE/PubMed |
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| CitedBy_id | crossref_primary_10_1016_j_molcel_2020_04_014 crossref_primary_10_3390_molecules22020235 crossref_primary_10_1002_cbic_202000747 crossref_primary_10_1016_j_bbamcr_2019_118540 crossref_primary_10_1016_j_chembiol_2016_08_014 crossref_primary_10_1038_s41467_020_15455_x crossref_primary_10_1021_jacs_5c05635 crossref_primary_10_1038_s41467_025_63024_x crossref_primary_10_1038_s41598_019_49261_3 crossref_primary_10_1002_psc_2943 crossref_primary_10_1016_j_cbpa_2018_06_004 crossref_primary_10_1111_cbdd_13851 |
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| Keywords | TARGET TRICLOSAN FABI INHIBITION FATTY-ACID BIOSYNTHESIS MECHANISM ANALOGS PLASMODIUM-FALCIPARUM ESCHERICHIA-COLI BINDING |
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| SubjectTerms | Acyl Carrier Protein - metabolism Chemistry Chemistry, Multidisciplinary Enoyl-(Acyl-Carrier-Protein) Reductase (NADH) - isolation & purification Enoyl-(Acyl-Carrier-Protein) Reductase (NADH) - metabolism Escherichia coli - enzymology Escherichia coli Proteins - isolation & purification Escherichia coli Proteins - metabolism Fatty Acid Synthase, Type II - isolation & purification Fatty Acid Synthase, Type II - metabolism Models, Molecular Molecular Structure Oxidoreductases - isolation & purification Oxidoreductases - metabolism Physical Sciences Protein Binding Protein Engineering Science & Technology Triclosan - chemistry Triclosan - metabolism |
| Title | Trapping of the Enoyl-Acyl Carrier Protein Reductase-Acyl Carrier Protein Interaction |
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