AlignS: A Processing-In-Memory Accelerator for DNA Short Read Alignment Leveraging SOT-MRAM

Classified as a complex big data analytics problem, DNA short read alignment serves as a major sequential bottleneck to massive amounts of data generated by next-generation sequencing platforms. With Von-Neumann computing architectures struggling to address such computationally-expensive and memory-...

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Bibliographic Details

Published in:	Proceedings of the 56th Annual Design Automation Conference 2019 pp. 1 - 6
Main Authors:	Angizi, Shaahin, Sun, Jiao, Zhang, Wei, Fan, Deliang
Format:	Conference Proceeding
Language:	English
Published:	ACM 01.06.2019
Subjects:	Bioinformatics Computer architecture DNA Genomics Magnetic tunneling Micromechanical devices Sequential analysis
Online Access:	Get full text
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