Search Results - simple python script

Simple MATLAB and Python scripts for multi‐exponential analysis by Afrough, Armin, Mokhtari, Rasoul, Feilberg, Karen L.

“… This paper describes simple MATLAB and Python functions and scripts for regularized multi‐exponential analysis methods for 1D and 2D data and example test problems and experiments. Regularized least…”
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Pteros 2.0: Evolution of the fast parallel molecular analysis library for C++ and python by Yesylevskyy, Semen O.

“… This makes it suitable for writing complex reusable programs in C++ and simple interactive scripts in Python alike…”
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Click, Compute, Create: A Review of Web‐based Tools for Enzyme Engineering by Tripp, Adrian, Braun, Markus, Wieser, Florian, Oberdorfer, Gustav, Lechner, Horst

“…Enzyme engineering, though pivotal across various biotechnological domains, is often plagued by its time‐consuming and labor‐intensive nature. This review aims…”
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refellips: A Python package for the analysis of variable angle spectroscopic ellipsometry data by Robertson, Hayden, Gresham, Isaac J., Prescott, Stuart W., Webber, Grant B., Wanless, Erica J., Nelson, Andrew

“… The software is designed to be used in Jupyter notebook environments or simple Python scripts, facilitating reproducible research…”
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Catalight─An Open-Source Automated Photocatalytic Reactor Package Illustrated through Plasmonic Acetylene Hydrogenation by Bourgeois, B B, Dai, A X, Carlin, C C, Yuan, L, Al-Zubeidi, A, Cheng, W H, Swearer, D F, Dionne, J A

“… varying laser power, wavelength, and temperature in a multiday experiment controlled by a simple Python script…”
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Scripting MODFLOW Model Development Using Python and FloPy by Bakker, M., Post, V., Langevin, C. D., Hughes, J. D., White, J. T., Starn, J. J., Fienen, M. N.

“… Scripting model development with the programming language Python is presented here as an alternative approach…”
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Rapid development of image analysis research tools: Bridging the gap between researcher and clinician with pyOsiriX by Blackledge, Matthew D., Collins, David J., Koh, Dow-Mu, Leach, Martin O.

“…We present pyOsiriX, a plugin built for the already popular dicom viewer OsiriX that provides users the ability to extend the functionality of OsiriX through simple Python scripts…”
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Gurney and cylinder wall velocities of explosives: analytical estimates and thermochemical simulations by Mathieu, Didier

“…Gurney velocity ( ) and cylinder wall velocity ( ) of energetic materials are calculated using the semi-empirical C method, an analytical model previously…”
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ENDFtk: A robust tool for reading and writing ENDF-formatted nuclear data by Haeck, W., Gibson, N., Talou, P.

“…ENDFtk is a recently developed C++ and Python interface to interact with ENDF-6 formatted nuclear data files…”
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QMflows: A Tool Kit for Interoperable Parallel Workflows in Quantum Chemistry by Zapata, Felipe, Ridder, Lars, Hidding, Johan, Jacob, Christoph R, Infante, Ivan, Visscher, Lucas

“… QMflows allows users to write complex workflows in terms of simple Python scripts. It supports the development of interoperable workflows involving multiple quantum chemistry codes and executes them efficiently on large scale parallel computers…”
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Wellmap: a file format for microplate layouts by Kundert, Kale

“… It is also accompanied by a tool for generating clear visualizations of layout files, and a simple API for parsing layout files in analysis scripts written in python or R…”
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PyCoM: a python library for large-scale analysis of residue–residue coevolution data by Bibik, Philipp, Alibai, Sabriyeh, Pandini, Alessandro, Dantu, Sarath Chandra

“… leveraging on biological and structural annotations already available in UniProt. Results We present a Python library, PyCoM, which enables users to query and analyze coevolution matrices and sequence alignments of 457…”
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Asynchronous Stepped Fourier Transform Ion Mobility Spectrometry by Edstrom, Emily, Gharari, Saned, Davis, Eric

“… In this work, an asynchronous stepped frequency FTIMS method is demonstrated, which uses a simple, software timed pulse generator compatible with any modern Analog-Digital Converter (ADC) system…”
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SEXCMD: Development and validation of sex marker sequences for whole-exome/genome and RNA sequencing by Jeong, Seongmun, Kim, Jiwoong, Park, Won, Jeon, Hongmin, Kim, Namshin

“…Over the last decade, a large number of nucleotide sequences have been generated by next-generation sequencing technologies and deposited to public databases…”
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High-fidelity multiphysics modeling of pulsed reactor heat generation in the Annular Core Research Reactor fuel using Serpent 2 by Colvin, Emory, Palmer, Todd S.

“…Sandia National Laboratories’ Annular Core Research Reactor is a unique pulsed reactor using UO2-BeO fuel. Unlike TRIGA reactors, which often operate in…”
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DUBS: A Framework for Developing Directory of Useful Benchmarking Sets for Virtual Screening by Fine, Jonathan, Muhoberac, Matthew, Fraux, Guillaume, Chopra, Gaurav

“… To address this, we introduce the Directory of Useful Benchmarking Sets (DUBS) framework, as a simple and flexible tool to rapidly create benchmarking sets using the protein databank…”
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General expressions of molecular multicenter integrals for Slater‐type orbitals by Yu, Tao, Si, Yitao, Zhou, Jiancheng

“… A simple Python script is provided to run the formulas. The correctness and computational efficiency of the script have been verified. One‐electron three…”
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ICON ComIn – the ICON Community Interface (ComIn version 0.1.0, with ICON version 2024.01-01) by Hartung, Kerstin, Kern, Bastian, Dreier, Nils-Arne, Geisbüsch, Jörn, Haghighatnasab, Mahnoosh, Jöckel, Patrick, Kerkweg, Astrid, Loch, Wilton Jaciel, Prill, Florian, Rieger, Daniel

“…”) to the ICON model using the dynamic loader of the operating system. ComIn is intended for a wide range of use cases, from the integration of simple diagnostic Python scripts to chemistry model components into ICON…”
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Precision mapping and treatment of spring dead spot in bermudagrass using unmanned aerial vehicles and global navigation satellite systems sprayer technology by Henderson, Caleb, Haak, David, Mehl, Hillary, Shafian, Sanaz, McCall, David

“… This paper introduces a novel approach to spring dead spot identification utilizing a custom Python script, the Simple Ophiosphaerella Damage Detector (SODD…”
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User-friendly parallelization of GAUDI applications with Python by Mato, Pere, Smith, Eoin

“… These applications can be configured and driven by simple Python scripts. Given the fact that a considerable amount of existing software has been developed using serial…”
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