Search Results - python executable

DyPyBench: A Benchmark of Executable Python Software by Bouzenia, Islem, Krishan, Bajaj Piyush, Pradel, Michael

“… However, unlike for other popular languages, there currently is no comprehensive benchmark suite of executable Python projects, which hinders the development of dynamic analyses…”
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PE Parser: A Python package for Portable Executable files processing by Gibert, Daniel

“…PE Parser is a Python package to parse and work with the hexadecimal representation of executables…”
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Python Executable Script for Estimating Two Effective Parameters to Individualize Brain-Computer Interfaces: Individual Alpha Frequency and Neurophysiological Predictor by Alonso-Valerdi, Luz María

“…A brain-computer interface (BCI) aims to establish communication between the human brain and a computing system so as to enable the interaction between an…”
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DyPyBench: A Benchmark of Executable Python Software by Bouzenia, Islem, Bajaj, Piyush Krishan, Pradel, Michael

“… However, unlike for other popular languages, there currently is no comprehensive benchmark suite of executable Python projects, which hinders the development of dynamic analyses…”
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PySmash: Python package and individual executable program for representative substructure generation and application by Yang, Zi-Yi, Yang, Zhi-Jiang, Zhao, Yue, Yin, Ming-Zhu, Lu, Ai-Ping, Chen, Xiang, Liu, Shao, Hou, Ting-Jun, Cao, Dong-Sheng

“…Substructure screening is widely applied to evaluate the molecular potency and ADMET properties of compounds in drug discovery pipelines, and it can also be…”
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Making an executable paper with the Python in Heliophysics Community to foster open science and improve reproducibility by Polson, Shawn, Ringuette, Rebecca, Rastaetter, Lutz, Grimes, Eric, Niehof, Jonathan, Murphy, Nicholas A., Zheng, Yihua

“…We share the story of how we made this paper, the first executable paper in Heliophysics, through cross-disciplinary collaboration to highlight the benefits of our process…”
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How to use PyInstaller to create Python executables by Yegulalp, Serdar

“…PyInstaller works by reading your Python program, analyzing all its imports, and bundling copies of those imports with your program and a copy of the Python runtime…”
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PyOxidizer uses Rust to make Python executables by Yegulalp, Serdar

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SimPlot++: a Python application for representing sequence similarity and detecting recombination by Samson, Stéphane, Lord, Étienne, Makarenkov, Vladimir

“… Results We have developed SimPlot++, an open-source multiplatform application implemented in Python, which can be used to produce publication quality sequence similarity plots using 63 nucleotide and 20 amino acid distance models…”
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Generative AI for Geospatial Analysis: Fine-Tuning ChatGPT to Convert Natural Language into Python-Based Geospatial Computations by Sherman, Zachary, Sharma Dulal, Sandesh, Cho, Jin-Hee, Zhang, Mengxi, Kim, Junghwan

“…This study investigates the potential of fine-tuned large language models (LLMs) to enhance geospatial intelligence by translating natural language queries into executable Python code…”
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An Executable Structural Operational Formal Semantics for Python by Köhl, Maximilian A

“…Python is a popular high-level general-purpose programming language also heavily used by the scientific community…”
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PESummary: The code agnostic Parameter Estimation Summary page builder by Hoy, Charlie, Raymond, Vivien

“… The easy to use Python executable scripts and extensive online documentation has resulted in PESummary becoming a key component in the international gravitational-wave analysis toolkit…”
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Statistics Using Python by Campesato, Oswald

“… The book ensures that each topic is introduced with clarity, followed by executable Python code samples that can be modified and applied according to individual needs…”
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pyPept: a python library to generate atomistic 2D and 3D representations of peptides by Ochoa, Rodrigo, Brown, J. B., Fox, Thomas

“…We present pyPept, a set of executables and underlying python-language classes to easily create, manipulate, and analyze peptide molecules using the FASTA, HELM, or recently-developed BILN notations…”
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Image processing for electron microscopy single-particle analysis using XMIPP by Scheres, Sjors H W, Núñez-Ramírez, Rafael, Sorzano, Carlos O S, Carazo, José María, Marabini, Roberto

“… models for such data sets through random conical tilt reconstruction methods. All protocols presented have been implemented as stand-alone, executable python scripts, for which a dedicated graphical user interface has been developed…”
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Bayesian modelling of time series data (BayModTS)—a FAIR workflow to process sparse and highly variable data by Höpfl, Sebastian, Albadry, Mohamed, Dahmen, Uta, Herrmann, Karl-Heinz, Kindler, Eva Marie, König, Matthias, Reichenbach, Jürgen Rainer, Tautenhahn, Hans-Michael, Wei, Weiwei, Zhao, Wan-Ting, Radde, Nicole Erika

“…Motivation Systems biology aims to better understand living systems through mathematical modelling of experimental and clinical data. A pervasive challenge in…”
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2FAST2Q: a general-purpose sequence search and counting program for FASTQ files by Bravo, Afonso M., Typas, Athanasios, Veening, Jan-Willem

“… 2FAST2Q is built in Python, with published standalone executables in Windows MS, MacOS, and Linux…”
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RANGER-DTL 2.0: rigorous reconstruction of gene-family evolution by duplication, transfer and loss by Bansal, Mukul S, Kellis, Manolis, Kordi, Misagh, Kundu, Soumya

“… optimal reconciliations and alternative event cost assignments. RANGER-DTL 2.0 is open-source and written in C++ and Python…”
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A graphical tool for formal verification using Event-B modeling by Karmakar, Rahul

“…Event-B is a formal method for describing and verifying systems at the system level. It enables a refining technique to design the system incrementally. Using…”
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SAP2000 API Expert: a custom generative pre-trained transformer (GPT) for converting narrative structural engineering problems to SAP2000 API codes by Djafar-Henni, Nesreddine, Khelaifia, Akram, Djafar-Henni, Mohamed, Guettala, Salah, Djedoui, Nassim

“… This study introduces SAP2000 API Expert, a custom Generative Pre-Trained Transformer (GPT) based on ChatGPT, for converting narrative structural engineering problems to SAP2000 API Python codes…”
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