Search Results - phenomena AND processes::(mathematical OR matematika) concepts::algorithms
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Comparison as a Social Practice in the Analysis of Chaotic Phenomena: the Case of the Double Pendulum
ISSN: 1571-0068, 1573-1774Published: Singapore Springer Nature Singapore 01.01.2024Published in International journal of science and mathematics education (01.01.2024)“…While scholars have proposed incorporating the study of complex phenomena such as chaotic systems in high school and undergraduate-level curricula, the literature on this topic is scant…”
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S-Leaping: An Adaptive, Accelerated Stochastic Simulation Algorithm, Bridging τ-Leaping and R-Leaping
ISSN: 0092-8240, 1522-9602, 1522-9602Published: New York Springer US 01.08.2019Published in Bulletin of mathematical biology (01.08.2019)“…We propose the S -leaping algorithm for the acceleration of Gillespie’s stochastic simulation algorithm that combines the advantages of the two main accelerated methods; the τ…”
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Distilling free-form natural laws from experimental data
ISSN: 1095-9203, 1095-9203Published: United States 03.04.2009Published in Science (American Association for the Advancement of Science) (03.04.2009)“…For centuries, scientists have attempted to identify and document analytical laws that underlie physical phenomena in nature…”
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4
Solving the chemical master equation by a fast adaptive finite state projection based on the stochastic simulation algorithm
ISSN: 0025-5564, 1879-3134Published: United States Elsevier Inc 01.11.2015Published in Mathematical biosciences (01.11.2015)“…•Efficient use of the stochastic simulation algorithm (SSA) to speed up the finite state projection (FSP) method…”
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5
Product-Form Stationary Distributions for Deficiency Zero Networks with Non-mass Action Kinetics
ISSN: 0092-8240, 1522-9602Published: New York Springer US 01.12.2016Published in Bulletin of mathematical biology (01.12.2016)“…In many applications, for example when computing statistics of fast subsystems in a multiscale setting, we wish to find the stationary distributions of systems…”
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6
Quasi-Monte Carlo Methods Applied to Tau-Leaping in Stochastic Biological Systems
ISSN: 0092-8240, 1522-9602, 1522-9602Published: New York Springer US 01.08.2019Published in Bulletin of mathematical biology (01.08.2019)“…Quasi-Monte Carlo methods have proven to be effective extensions of traditional Monte Carlo methods in, amongst others, problems of quadrature and the sample…”
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The Impact of Elastic Deformations of the Extracellular Matrix on Cell Migration
ISSN: 0092-8240, 1522-9602, 1522-9602Published: New York Springer US 2020Published in Bulletin of mathematical biology (2020)“… In this paper, we develop a mathematical model of a single cell migrating on an elastic matrix, which accounts for the deformation of the matrix induced by forces exerted by the cell, and investigate…”
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Time To Revise COPD Treatment Algorithm
ISSN: 1178-2005, 1176-9106, 1178-2005Published: New Zealand Dove Medical Press Limited 01.09.2019Published in International journal of chronic obstructive pulmonary disease (01.09.2019)“…In 2017, a new two-step algorithm for the treatment of COPD was proposed. This algorithm was based on the severity of symptoms and phenotypes or treatable…”
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A New Pharmacogenetic Algorithm to Predict the Most Appropriate Dosage of Acenocoumarol for Stable Anticoagulation in a Mixed Spanish Population
ISSN: 1932-6203, 1932-6203Published: United States Public Library of Science (PLoS) 15.03.2016Published in PLOS ONE (15.03.2016)“… efficient use of healthcare resources. The objective of this study is to develop a new algorithm that includes clinical and genetic variables to predict the most appropriate acenocoumarol dosage for stable anticoagulation in a wide range of patients…”
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Coloured Noise from Stochastic Inflows in Reaction–Diffusion Systems
ISSN: 0092-8240, 1522-9602, 1522-9602Published: New York Springer US 01.04.2020Published in Bulletin of mathematical biology (01.04.2020)“…In this paper, we present a framework for investigating coloured noise in reaction–diffusion systems. We start by considering a deterministic…”
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Twelve quick tips for designing sound dynamical models for bioprocesses
ISSN: 1553-7358, 1553-734X, 1553-7358Published: United States Public Library of Science 22.08.2019Published in PLoS computational biology (22.08.2019)“…Because of the inherent complexity of bioprocesses, mathematical models are more and more used for process design, control, optimization, etc…”
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IFCRL: Interval-Intent Fuzzy Concept Re-Cognition Learning Model
ISSN: 1063-6706, 1941-0034Published: New York IEEE 01.06.2024Published in IEEE transactions on fuzzy systems (01.06.2024)“…The fuzzy concept serves as a crucial tool for describing phenomena and constitutes the fundamental unit of human cognition…”
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Extending the Multi-level Method for the Simulation of Stochastic Biological Systems
ISSN: 0092-8240, 1522-9602, 1522-9602Published: New York Springer US 01.08.2016Published in Bulletin of mathematical biology (01.08.2016)“…The multi-level method for discrete-state systems, first introduced by Anderson and Higham (SIAM Multiscale Model Simul 10(1):146–179, 2012 ), is a highly…”
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A moment-convergence method for stochastic analysis of biochemical reaction networks
ISSN: 1089-7690, 1089-7690Published: United States 21.05.2016Published in The Journal of chemical physics (21.05.2016)“…Traditional moment-closure methods need to assume that high-order cumulants of a probability distribution approximate to zero. However, this strong assumption…”
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15
Stochastic Mechanochemical Description of a Bioinspired Polymerization Process
ISSN: 0092-8240, 1522-9602, 1522-9602Published: New York Springer US 01.01.2019Published in Bulletin of mathematical biology (01.01.2019)“…We present a theoretical investigation of a polymerization process catalyzed by an enzyme…”
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Comparison of Deterministic and Stochastic Regime in a Model for Cdc42 Oscillations in Fission Yeast
ISSN: 0092-8240, 1522-9602, 1522-9602Published: New York Springer US 01.05.2019Published in Bulletin of mathematical biology (01.05.2019)“…Oscillations occur in a wide variety of essential cellular processes, such as cell cycle progression, circadian clocks and calcium signaling in response to stimuli…”
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The use of concept maps during knowledge elicitation in ontology development processes – the nutrigenomics use case
ISSN: 1471-2105, 1471-2105Published: England BioMed Central 25.05.2006Published in BMC bioinformatics (25.05.2006)“… The involvement of geographically distributed domain experts, the need for domain experts to lead the design process, the application of the ontologies and the life cycles of bio-ontologies…”
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Simulation and inference algorithms for stochastic biochemical reaction networks: from basic concepts to state-of-the-art
ISSN: 1742-5662, 1742-5662Published: England 01.02.2019Published in Journal of the Royal Society interface (01.02.2019)“… Mathematical idealizations of biochemically reacting systems must be able to capture stochastic phenomena…”
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FiCoS: A fine-grained and coarse-grained GPU-powered deterministic simulator for biochemical networks
ISSN: 1553-7358, 1553-734X, 1553-7358Published: United States Public Library of Science 01.09.2021Published in PLoS computational biology (01.09.2021)“…Mathematical models of biochemical networks can largely facilitate the comprehension of the mechanisms at the basis of cellular processes, as well as the formulation of hypotheses that can be…”
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Reservoir computing approaches to unsupervised concept drift detection in dynamical systems
ISSN: 1089-7682, 1089-7682Published: United States 01.02.2025Published in Chaos (Woodbury, N.Y.) (01.02.2025)“… Rather, these systems can change over time, a phenomenon referred to as concept drift in the modeling community…”
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