Search Results - java (general OR genetics)

From the depths of the Java Trench: genomic analysis of Priestia flexa JT4 reveals bioprospecting and lycopene production potential by Radjasa, Ocky K., Steven, Ray, Natanael, Yosua, Nugrahapraja, Husna, Radjasa, Septhy K., Kristianti, Tati, Moeis, Maelita R., Trinugroho, Joko P., Suharya, Haekal B., Rachmatsyah, Alfito O., Dwijayanti, Ari, Putri, Mutiara R., de Fretes, Charlie E., Siallagan, Zen L., Fadli, Muhammad, Opier, Rafidha D. A., Farahyah, Jandinta D., Rahmawati, Viana, Rizanti, Meirifa, Humaira, Zalfa, Prihatmanto, Ary S., Hananto, Nugroho D., Susanto, R. Dwi, Chahyadi, Agus, Elfahmi, Priharto, Neil, Kamarisima, Dwivany, Fenny M.

“… m in the Java Trench, Indonesia, utilizing both culture-dependent and whole-genome sequencing methods…”
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The Hessian fly recessive resistance gene h4 mapped to chromosome 1A of the wheat cultivar ‘Java’ using genotyping-by-sequencing by Niu, Fuan, Xu, Yunfeng, Liu, Xuming, Zhao, Lanfei, Bernardo, Amy, Li, Yaoguang, Liu, Guoxia, Chen, Ming-Shun, Cao, Liming, Hu, Zhenbin, Xu, Xiangyang, Bai, Guihua

“… kb region in chromosome 1A of the wheat cultivar ‘Java.’ Hessian fly (HF), Mayetiola destructor , is one of the most destructive insect pests in wheat worldwide…”
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Java web tools for PCR, in silico PCR, and oligonucleotide assembly and analysis by Kalendar, Ruslan, Lee, David, Schulman, Alan H.

“…The polymerase chain reaction is fundamental to molecular biology and is the most important practical molecular technique for the research laboratory. We have…”
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ARJA: Automated Repair of Java Programs via Multi-Objective Genetic Programming by Yuan, Yuan, Banzhaf, Wolfgang

“… GenProg is well recognized as a prominent repair approach of this kind, which uses genetic programming (GP…”
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Carving out turf in a biodiversity hotspot: multiple, previously unrecognized shrew species co-occur on Java Island, Indonesia by Esselstyn, Jacob A., Maharadatunkamsi, Achmadi, Anang S., Siler, Cameron D., Evans, Ben J.

“… (genus Crocidura) diversity on the Indonesian island of Java. We sequenced portions of nine unlinked…”
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A new JAVA interface implementation of THESIAS: testing haplotype effects in association studies by Tregouet, D. A., Garelle, V.

“… In addition to the command line interface, a graphical JAVA interface is now proposed allowing one to run THESIAS in a user-friendly manner…”
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QGene 4.0, an extensible Java QTL-analysis platform by Joehanes, Roby, Nelson, James C.

“…Of many statistical methods developed to date for quantitative trait locus (QTL) analysis, only a limited subset are available in public software allowing…”
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Phylogenetic and DNA barcoding study on Dehaasia pugerensis Koord. & Valeton, an endemic and critically endangered species from East Java, Indonesia by Widjaya, Aulia Hasan, Salamah, Andi, Maryenti, Tety, Robiansyah, Iyan, Martiansyah, Irfan, Hariri, Muhammad Rifqi, Sun, Weibang

“…Background Dehaasia pugerensis Koord. & Valeton is an endemic plant species classified as critically endangered (CR) in Jember, Java…”
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Genevar: a database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies by Yang, Tsun-Po, Beazley, Claude, Montgomery, Stephen B., Dimas, Antigone S., Gutierrez-Arcelus, Maria, Stranger, Barbara E., Deloukas, Panos, Dermitzakis, Emmanouil T.

“…Genevar (GENe Expression VARiation) is a database and Java tool designed to integrate multiple datasets, and provides analysis and visualization of associations between sequence variation and gene expression…”
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SARS-CoV-2 genetic variation and bacterial communities of naso-oropharyngeal samples in middle-aged and elderly COVID-19 patients in West Java, Indonesia by Adzdzakiy, Muhammad M., Sutarno, Sutarno, Asyifa, Isnaini Z., Sativa, Alvira R., Fiqri, Ahmad R.A., Fibriani, Azzania, Ristandi, Ryan B., Ningrum, Ratih A., Iryanto, Syam B., Prasetyoputri, Anggia, Dharmayanthi, Anik B., Saputra, Sugiyono

“…تعكس عدد حالات كورونا في إندونيسيا خطورة الأمراض وانتشارها بسرعة. تم إجراء الرصد الجينومي لفيروس كورونا المستجد والتحقيق في المجتمعات البكتيرية للجهاز التنفسي…”
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Distribution of Voltage-Gated Sodium Channel (Nav) Alleles among the Aedes aegypti Populations In Central Java Province and Its Association with Resistance to Pyrethroid Insecticides by Sayono, Sayono, Hidayati, Anggie Puspa Nur, Fahri, Sukmal, Sumanto, Didik, Dharmana, Edi, Hadisaputro, Suharyo, Asih, Puji Budi Setia, Syafruddin, Din

“… WHO susceptibility tests, using several pyrethroid compounds, were conducted on Ae. aegypti larvae that were collected and raised to adulthood from Semarang, Surakarta, Kudus and Jepara in Java…”
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Distribution of ABO and D antigen expression in Yogyakarta, Java Island: a pioneer large-scale study in Indonesia by Bidayah, Hasna Fadlilatul, Triyono, Teguh, Fichou, Yann, Pratiwi, Rarastoeti, Nurpratami, Diah, Sofro, Abdul Salam

“…Objective Here, we sought to report ABO and D antigen distribution in blood donors from Yogyakarta, Java Island, Indonesia. Phenotype data (ABO/D…”
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Analysis of SARS-CoV-2 Genomes from West Java, Indonesia by Fibriani, Azzania, Stephanie, Rebecca, Alfiantie, Afifah Alifia, Siregar, Agust Leo Fany, Pradani, Gusti Ayu Prani, Yamahoki, Nicholas, Purba, William Steflandel, Alamanda, Cut Nur Cinthia, Rahmawati, Ema, Rachman, Rifky Waluyajati, Robiani, Rini, Ristandi, Ryan Bayusantika

“…West Java Health Laboratory (WJHL) is one of the many institutions in Indonesia that have sequenced SARS-CoV-2 genome…”
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Genetic heterogeneity of thalassemia major patients in Rembang Regency, Central Java, Indonesia by Widyastiti, Nyoman Suci, Nainggolan, Ita Margaretha, Limijadi, Edward Kurnia Setiawan, Hendrianingtyas, Meita, Retnoningrum, Dwi, Ariosta, Nency, Yetty Movieta, Dewi, Mayasari, Sutamti, Ratnaningsih, Tri, Sukorini, Usi

“… This study aims to investigate the mutational diversity of the globin genes in thalassemia major patients in Rembang Regency, Central Java, Indonesia. Methods…”
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Selecting optimal software code descriptors—The case of Java by Bugayenko, Yegor, Kholmatova, Zamira, Kruglov, Artem, Pedrycz, Witold, Succi, Giancarlo

“…Over the last 25 years, a considerable proliferation of software metrics and a plethora of tools have emerged to extract them. While this is indeed positive…”
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A new amino acid substitution in the MvALS1 gene of metsulfuron-methyl resistant biotypes Monochoria vaginalis (Burm. f.) C. Presl from West Java, Indonesia by Putri, Kansa Dianti, Guntoro, Dwi, Ardie, Sintho Wahyuning, Hariyadi

“…The most bothersome weed in rice fields in the Indonesian province of West Java is Monochoria vaginalis (Burm. F.) C…”
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LDA—a java-based linkage disequilibrium analyzer by Ding, Keyue, Zhou, Kaixin, He, Fuchu, Shen, Yan

“…We describe an integrated java-based program that provides elaborate graphic and plain-text output of pairwise linkage disequilibrium (LD…”
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Exploring actor-network and space–time production for social-ecological resilience: case study on mangrove conservation in the North Coast of Java, Indonesia by Ainurrohmah, Diah, Yusup, Yasin, Noviani, Rita

“… The study applied the regressive-progressive method qualitatively through descriptive, analytic-regressive, and historical-genetic stages…”
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Molecular epidemiology and genetic diversity of norovirus infection in children hospitalized with acute gastroenteritis in East Java, Indonesia in 2015–2019 by Utsumi, Takako, Lusida, Maria Inge, Dinana, Zayyin, Wahyuni, Rury Mega, Soegijanto, Soegeng, Soetjipto, Athiyyah, Alpha Fardah, Sudarmo, Subijanto Marto, Ranuh, Reza Gunadi, Darma, Andy, Juniastuti, Yamani, Laura Navika, Doan, Yen Hai, Shimizu, Hiroyuki, Ishii, Koji, Matsui, Chieko, Deng, Lin, Abe, Takayuki, Katayama, Kazuhiko, Shoji, Ikuo

“…) among individuals of all ages worldwide, especially in children <5 years old. We investigated the epidemiology of noroviruses among hospitalized children at two hospitals in East Java, Indonesia…”
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Bacterial community composition and predicted functional ecology of sponges, sediment and seawater from the thousand islands reef complex, West Java, Indonesia by Gomes, Newton C. M, de Voogd, Nicole J, Cleary, Daniel F. R, Polónia, Ana R. M

“… (Stylissa massa and Xestospongia testudinaria) at four different reef sites in a coral reef ecosystem in West Java, Indonesia…”
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