Search Results - jana AND python source code

Guide assignment in single-cell CRISPR screens using crispat by Braunger, Jana M, Velten, Britta

“… To address this, we here propose crispat (CRISPR guide assignment tool), a Python package to facilitate the choice of a suitable guide assignment strategy for single-cell CRISPR screens…”
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Marginalizing Sample Consensus by Barath, Daniel, Noskova, Jana, Matas, Jiri

“…A new method for robust estimation, MAGSAC++, is proposed. It introduces a new model quality (scoring) function that does not make inlier-outlier decisions,…”
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deepFPlearn +: enhancing toxicity prediction across the chemical universe using graph neural networks by Soulios, Kyriakos, Scheibe, Patrick, Bernt, Matthias, Hackermüller, Jörg, Schor, Jana

“…Abstract Summary Sophisticated approaches for the in silico prediction of toxicity are required to support the risk assessment of chemicals. The number of…”
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decoupleR: ensemble of computational methods to infer biological activities from omics data by Badia-i-Mompel, Pau, Vélez Santiago, Jesús, Braunger, Jana, Geiss, Celina, Dimitrov, Daniel, Müller-Dott, Sophia, Taus, Petr, Dugourd, Aurelien, Holland, Christian H, Ramirez Flores, Ricardo O, Saez-Rodriguez, Julio

“… Here, we present decoupleR, a Bioconductor and Python package containing computational methods to extract these activities within a unified framework…”
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Open-Source Web Service with Morphological Dictionary-Supplemented Deep Learning for Morphosyntactic Analysis of Czech by Straka, Milan, Straková, Jana

“…We present an open-source web service for Czech morphosyntactic analysis. The system combines a deep learning model with rescoring by a high-precision morphological dictionary at inference time…”
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Guide assignment in single-cell CRISPR screens using crispat by Braunger, Jana M., Velten, Britta

“… To address this, we here propose crispat (CRISPR guide assignment tool), a Python package to facilitate the choice of a suitable guide assignment strategy for single cell CRISPR screens…”
Get full text