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    Polar Dust, Nuclear Obscuration, and IR SED Diversity in Type-1 AGNs The AGN template library developed in this work can be obtained on github (https://github.com/karlan/AGN_templates) by Lyu, Jianwei, Rieke, George H.

    ISSN: 0004-637X, 1538-4357
    Published: The American Astronomical Society 16.10.2018
    Published in The Astrophysical journal (16.10.2018)
    “…Despite the hypothesized similar face-on viewing angles, the infrared emission of type-1 active galactic nuclei (AGNs) has diverse spectral energy distribution…”
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    Journal Article
  3. 3

    Interfacial nanomechanical heterogeneity of the E. coli biofilm matrix by Kreis, Christian Titus, Sullan, Ruby May A

    ISSN: 2040-3372
    Published: England 20.08.2020
    Published in Nanoscale (20.08.2020)
    “…The interface between bacterial biofilms and their environment plays a vital role in the recalcitrance of biofilms to biological, chemical, and mechanical…”
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    Journal Article
  4. 4

    Debris of Asteroid Disruptions Close to the Sun∗ ∗ Data and codes that generate the figures and main results of this work are publicly available on Zenodo (doi:10.5281/zenodo.2547298) and GitHub (https://github.com/Yeqzids/near-sun-disruptions) by Ye, Quanzhi, Granvik, Mikael

    ISSN: 0004-637X, 1538-4357
    Published: The American Astronomical Society 11.03.2019
    Published in The Astrophysical journal (11.03.2019)
    “…The under-abundance of asteroids on orbits with small perihelion distances suggests that thermally driven disruption may be an important process in the removal…”
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    Journal Article
  5. 5

    Rising from Ashes or Dying Flash? The Mega Outburst of Small Comet 289P/Blanpain in 2013∗ ∗ Data and codes that generate the figures of this work are available on Zenodo (10.5281/zenodo.3238650) and on GitHub (https://github.com/Yeqzids/blanpain-2013) by Ye, Quanzhi, Clark, David L.

    ISSN: 2041-8205, 2041-8213
    Published: The American Astronomical Society 17.06.2019
    Published in Astrophysical journal. Letters (17.06.2019)
    “…Jupiter-family comet 289P/Blanpain was first discovered in 1819 and was then lost for ∼200 years, only to be rediscovered in 2003 as a small, weakly active…”
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    Journal Article
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    A large-scale analysis of bioinformatics code on GitHub by Russell, Pamela H., Johnson, Rachel L., Ananthan, Shreyas, Harnke, Benjamin, Carlson, Nichole E.

    ISSN: 1932-6203, 1932-6203
    Published: United States Public Library of Science 31.10.2018
    Published in PloS one (31.10.2018)
    “… communities, and software impact. To investigate these issues, we curated a list of 1,720 bioinformatics repositories on GitHub through their mention in peer-reviewed bioinformatics articles…”
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    Journal Article
  8. 8

    Ten Simple Rules for Taking Advantage of Git and GitHub by Perez-Riverol, Yasset, Gatto, Laurent, Wang, Rui, Sachsenberg, Timo, Uszkoreit, Julian, Leprevost, Felipe da Veiga, Fufezan, Christian, Ternent, Tobias, Eglen, Stephen J., Katz, Daniel S., Pollard, Tom J., Konovalov, Alexander, Flight, Robert M., Blin, Kai, Vizcaíno, Juan Antonio

    ISSN: 1553-7358, 1553-734X, 1553-7358
    Published: United States Public Library of Science 14.07.2016
    Published in PLoS computational biology (14.07.2016)
    “…), NSF grant number 1252893 (http://www.nsf.gov/), and Novo Nordisk Foundation (http://www.novonordiskfonden.dk/en). GitHub relies, at its core, on the well-known…”
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    Journal Article
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    Mime: A flexible machine-learning framework to construct and visualize models for clinical characteristics prediction and feature selection by Liu, Hongwei, Zhang, Wei, Zhang, Yihao, Adegboro, Abraham Ayodeji, Fasoranti, Deborah Oluwatosin, Dai, Luohuan, Pan, Zhouyang, Liu, Hongyi, Xiong, Yi, Li, Wang, Peng, Kang, Wanggou, Siyi, Li, Xuejun

    ISSN: 2001-0370, 2001-0370
    Published: Netherlands Elsevier B.V 01.12.2024
    “…The widespread use of high-throughput sequencing technologies has revolutionized the understanding of biology and cancer heterogeneity. Recently, several…”
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    Journal Article
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    A tutorial on conducting genome‐wide association studies: Quality control and statistical analysis by Marees, Andries T., Kluiver, Hilde, Stringer, Sven, Vorspan, Florence, Curis, Emmanuel, Marie‐Claire, Cynthia, Derks, Eske M.

    ISSN: 1049-8931, 1557-0657, 1557-0657, 1234-988X
    Published: United States John Wiley & Sons, Inc 01.06.2018
    “… This tutorial aims to provide a guideline for conducting genetic analyses. Methods We discuss and explain key concepts and illustrate how to conduct GWAS using example scripts provided through GitHub (https…”
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    Journal Article
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    GitHubInclusifier: Finding and Fixing Non-Inclusive Language in GitHub Repositories by Todd, Liam, Grundy, John, Treude, Christoph

    ISSN: 2574-1934
    Published: ACM 14.04.2024
    “… The tool and evaluation data are available from: https://github.com/LiamTodd/github-inclusifier The demo video is available at: https://www.youtube.com/watch?v=1z1QKdQg…”
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    Conference Proceeding
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    HyperCRX 2.0: A Comprehensive and Automated Tool for Empowering GitHub Insights by Wang, Yantong, Wang, Wei, Xia, Xiaoya, Tang, Yenan, Bi, Fenglin, Han, Fanyu, Peng, Jiaheng, Zhao, Shengyu, You, Lan

    ISSN: 2574-1934
    Published: IEEE 27.04.2025
    “…HyperCRX is a browser extension designed for the GitHub platform, aimed at enhancing the open-source experience by providing in-depth insights into projects and developers…”
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    Conference Proceeding
  13. 13

    A user material approach for the solution of multi-field problems in Abaqus: Theoretical foundations, gradient-enhanced damage mechanics and thermo-mechanical coupling by Sobisch, Lennart, Kaiser, Tobias, Furlan, Tim, Menzel, Andreas

    ISSN: 0168-874X
    Published: Elsevier B.V 01.05.2024
    Published in Finite elements in analysis and design (01.05.2024)
    “…The solution of multi-field problems and the numerical implementation by means of the finite element method constitute a sophisticated part of the…”
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    Journal Article
  14. 14

    A catalogue of game-specific anti-patterns based on GitHub and Game Development Stack Exchange by Agrahari, Vartika, Shanbhag, Shriram, Chimalakonda, Sridhar, Rao, A. Eashaan

    ISSN: 0164-1212, 1873-1228
    Published: Elsevier Inc 01.10.2023
    Published in The Journal of systems and software (01.10.2023)
    “…With the ever-increasing use of games, game developers are expected to write efficient code and support several aspects such as security, maintainability, and…”
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    Journal Article
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    GitQ- Towards Using Badges as Visual Cues for GitHub Projects by Manasa Venigalla, Akhila Sri, Boyalakuntla, Kowndinya, Chimalakonda, Sridhar

    ISSN: 2643-7171
    Published: ACM 01.05.2022
    “…GitHub hosts millions of software repositories, facilitating developers to contribute to many projects in multiple ways…”
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    Conference Proceeding
  16. 16

    decoupleR: ensemble of computational methods to infer biological activities from omics data by Badia-i-Mompel, Pau, Vélez Santiago, Jesús, Braunger, Jana, Geiss, Celina, Dimitrov, Daniel, Müller-Dott, Sophia, Taus, Petr, Dugourd, Aurelien, Holland, Christian H, Ramirez Flores, Ricardo O, Saez-Rodriguez, Julio

    ISSN: 2635-0041, 2635-0041
    Published: England Oxford University Press 2022
    Published in Bioinformatics advances (2022)
    “…Summary Many methods allow us to extract biological activities from omics data using information from prior knowledge resources, reducing the dimensionality…”
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    Journal Article
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    ggClusterNet: An R package for microbiome network analysis and modularity‐based multiple network layouts by Wen, Tao, Xie, Penghao, Yang, Shengdie, Niu, Guoqing, Liu, Xiaoyu, Ding, Zhexu, Xue, Chao, Liu, Yong‐Xin, Shen, Qirong, Yuan, Jun

    ISSN: 2770-596X, 2770-5986, 2770-596X
    Published: Australia John Wiley & Sons, Inc 01.09.2022
    Published in iMeta (01.09.2022)
    “…The network analysis has attracted increasing attention and interest from ecological academics, thus it is of great necessity to develop more convenient and…”
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    Journal Article
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    PatchView: Multi-modality detection of security patches by Farhi, Nitzan, Koenigstein, Noam, Shavitt, Yuval

    ISSN: 0167-4048
    Published: Elsevier Ltd 01.04.2025
    Published in Computers & security (01.04.2025)
    “…Patching software become overwhelming for system administrators due to the large amounts of patch releases. Administrator should prioritize security patches to…”
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    Journal Article
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    HyperCRX: A Browser Extension for Insights into GitHub Projects and Developers by Tang, Yenan, Zhao, Shengyu, Xia, Xiaoya, Bi, Fenglin, Wang, Wei

    ISSN: 2643-7171
    Published: ACM 15.04.2024
    “…We present HyperCRX, a browser extension designed to enhance the open source experience by providing insights into GitHub projects and developers…”
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    Conference Proceeding