Search Results - Python interface

SBML2HYB: a Python interface for SBML compatible hybrid modeling by Pinto, José, Costa, Rafael S, Alexandre, Leonardo, Ramos, João, Oliveira, Rui

“…Abstract Summary Here, we present sbml2hyb, an easy-to-use standalone Python tool that facilitates the conversion of existing mechanistic models of biological systems in Systems Biology Markup Language (SBML…”
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scampy – A sub-halo clustering and abundance matching based python interface for painting galaxies on the dark matter halo/sub-halo hierarchy by Ronconi, Tommaso, Lapi, Andrea, Viel, Matteo, Sartori, Alberto

“… In order to have an easily accessible interface, all the libraries are wrapped in python…”
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A Fortran–Python interface for integrating machine learning parameterization into earth system models by Zhang, Tao, Morcrette, Cyril, Zhang, Meng, Lin, Wuyin, Xie, Shaocheng, Liu, Ye, Van Weverberg, Kwinten, Rodrigues, Joana

“…Parameterizations in earth system models (ESMs) are subject to biases and uncertainties arising from subjective empirical assumptions and incomplete…”
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Chemspyd: An open-source python interface for Chemspeed robotic chemistry and materials platforms by Seifrid, Martin, Strieth-Kalthoff, Felix, Haddadnia, Mohammad, Wu, Tony C., Alca, Emre, Bodo, Leticia, Arellano-Rubach, Sebastian, Yoshikawa, Naruki, Skreta, Marta, Keunen, Rachel, Aspuru-Guzik, Alán

“…We introduce Chemspyd , a lightweight, open-source Python package for operating the popular laboratory robotic platforms from Chemspeed Technologies…”
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Introducing Parselmouth: A Python interface to Praat by Jadoul, Yannick, Thompson, Bill, de Boer, Bart

“…•Parselmouth makes Praat functionality available in Python.•This allows usage of sophisticated acoustic analyses in this programming language…”
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PYTHON INTERFACE DESIGN FOR MICROPHOTOGRAPHY ANALYSIS:APPLICATION TO EVALUATE THE HEMORHEOLOGICAL ACTIVITY OF QUERCETIN by P.Buszniez, M. Gómez, H. V. Castellini, B.D. Riquelme

“…This work describes the development of a GUI (Graphic User Interface) in Python to systematize the image analysiswithin the framework of the in vitro hemorheological study of phytochemicals that could be used for diabetes treatment…”
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Design and implementation of a cost‐effective practical single‐phase power quality analyzer using pyboard microcontroller and python‐to‐python interface by Sabahi, Mehran, Safari, Ashkan, Nazari‐Heris, Morteza

“…‐effective and practical single‐phase power quality analyzer (SPPQA) using Pyboard microcontroller and Python‐to‐Python interface…”
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MILK: a Python scripting interface to MAUD for automation of Rietveld analysis by Savage, Daniel J., Lutterotti, Luca, Biwer, Christopher M., McKerns, Michael, Bolme, Cynthia, Knezevic, Marko, Vogel, Sven C.

“… Interactive analyses via graphical user interfaces tend to slow down obtaining quantitative results such as lattice parameters and phase fractions…”
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pyOpenMS: A Python-based interface to the OpenMS mass-spectrometry algorithm library by Röst, Hannes L., Schmitt, Uwe, Aebersold, Ruedi, Malmström, Lars

“…pyOpenMS is an open‐source, Python‐based interface to the C++ OpenMS library, providing facile access to a feature‐rich, open…”
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pybliometrics: Scriptable bibliometrics using a Python interface to Scopus by Rose, Michael E., Kitchin, John R.

“…We present a wrapper for the Scopus RESTful API written for Python 3. The wrapper allows users to access the Scopus database via user-friendly interfaces and can be used without prior knowledge of RESTful APIs…”
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Python interfaces for the Smoldyn simulator by Singh, Dilawar, Andrews, Steven S

“… Previously, users could only define models using text-based input or a C/C++ application programming interface (API…”
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i-PI: A Python interface for ab initio path integral molecular dynamics simulations by Ceriotti, Michele, More, Joshua, Manolopoulos, David E.

“… Here we describe i-PI, an interface written in Python that has been designed to minimise the effort required to bring state-of-the-art path integral techniques to an electronic structure program…”
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Flopy: The Python Interface for MODFLOW by Leaf, Andrew T., Fienen, Michael N.

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ACPYPE - AnteChamber PYthon Parser interfacE by Sousa da Silva, Alan W, Vranken, Wim F

“…Background ACPYPE (or AnteChamber PYthon Parser interfacE) is a wrapper script around the ANTECHAMBER software that simplifies the generation of small molecule…”
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PRINSAS 2.0 : a Python-based graphical user interface tool for fitting polydisperse spherical pore models in small-angle scattering analysis of porous materials by Vu, Phung Nhu Hao, Radlinski, Andrzej P., Blach, Tomasz, Daniels, John, Regenauer-Lieb, Klaus

“… These issues are addressed with PRINSAS 2.0 , a portable Python-based tool with an intuitive graphical user interface…”
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Python BMDS: A Python interface library and web application for the canonical EPA dose-response modeling software by Pham, Ly Ly, Watford, Sean, Friedman, Katie Paul, Wignall, Jessica, Shapiro, Andrew J.

“…•Python BMDS and web application enable automation of models available from BMDS…”
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PyAlbany: A Python interface to the C++ multiphysics solver Albany by Liegeois, Kim, Perego, Mauro, Hartland, Tucker

“…). In this paper we introduce PyAlbany, a newly developed Python interface to the Albany library…”
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JBrowse Jupyter: a Python interface to JBrowse 2 by De Jesus Martinez, Teresa, Hershberg, Elliot A, Guo, Emma, Stevens, Garrett J, Diesh, Colin, Xie, Peter, Bridge, Caroline, Cain, Scott, Haw, Robin, Buels, Robert M, Stein, Lincoln D, Holmes, Ian H

“… Results We have developed a package that provides a Python interface to JBrowse 2’s suite of embeddable components, including the primary Linear Genome View…”
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Open-source python-OpenDSS interface for hybrid simulation of PV impact studies by Hariri, Ali, Newaz, Alvi, Faruque, Md Omar

“…This study introduces an open-source Python-OpenDSS simulation tool where the phasor simulation software OpenDSS is interfaced with an electromagnetic transient (EMT…”
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ClusTCR: a python interface for rapid clustering of large sets of CDR3 sequences with unknown antigen specificity by Valkiers, Sebastiaan, Van Houcke, Max, Laukens, Kris, Meysman, Pieter

“…Abstract Motivation The T-cell receptor (TCR) determines the specificity of a T-cell towards an epitope. As of yet, the rules for antigen recognition remain…”
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