Search Results - Parallel Reverse algorithm

A parallel algorithm for reverse engineering of biological networks by Bazil, Jason N, Qi, Feng, Beard, Daniel A

“… Such equations can be utilized in reverse engineering these biological networks, specifically since identifying these networks is challenging due to the cost of the necessary experiments growing…”
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Accelerated parallel algorithm for gene network reverse engineering by He, Jing, Zhou, Zhou, Reed, Michael, Califano, Andrea

“…Background The Algorithm for the Reconstruction of Accurate Cellular Networks (ARACNE) represents one of the most effective tools to reconstruct gene regulatory networks from large-scale molecular profile datasets…”
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A Parallel and Reverse Learn++.NSE Classification Algorithm by Shen, Yan, Du, Jianguo, Tong, Jingen, Dou, Qian, Jing, Luyi

“… A Parallel and Reverse Learn++.NSE algorithm, abbreviated as PRLearn++.NSE, is proposed in this paper by changing the ensemble…”
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A Parallel Implementation of the Network Identification by Multiple Regression (NIR) Algorithm to Reverse-Engineer Regulatory Gene Networks by Gregoretti, Francesco, Belcastro, Vincenzo, di Bernardo, Diego, Oliva, Gennaro

“… Using current reverse engineering algorithms to analyze large data sets can be very computational-intensive…”
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Reverse time migration of GPR data based on GPU parallel Symplectic Euler Algorithm and Total Variation Regularization by Gao, Xin, Lei, Jianwei, Chen, Zhiqing, Fang, Hongyuan

“… In terms of efficiency, reverse time migration uses the Finite Difference Time Domain (FDTD) algorithm for parallel CPU computation, which is inefficient…”
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Parallel Scalability of a Fine-Grain Prestack Reverse Time Migration Algorithm by Nunes-do-Rosario, Desnes A., Xavier-de-Souza, Samuel, Maciel, Rosangela C., Costa, Jesse C.

“… Aiming at performance improvement, this work conducted the parallelization of the core of a reverse time migration (RTM) algorithm…”
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EFMlrs: a Python package for elementary flux mode enumeration via lexicographic reverse search by Buchner, Bianca A, Zanghellini, Jürgen

“… Recently, Avis et al. developed mplrs--a parallel version of the lexicographic reverse search (lrs…”
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Parallel Algorithms for Inferring Gene Regulatory Networks: A Review by Abbaszadeh, Omid, Khanteymoori, Ali Reza, Azarpeyvand, Ali

“… In this paper, we attempt to provide a more detailed overview of the recent parallel algorithms for constructing gene regulatory networks…”
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An Efficient Parallel Reverse Conversion of Residue Code to Mixed-Radix Representation Based on the Chinese Remainder Theorem by Selianinau, Mikhail, Povstenko, Yuriy

“… We present a novel approach to the parallel reverse conversion from the residue code into a weighted number representation in the Mixed-Radix System (MRS…”
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Computing the Burrows–Wheeler transform of a string and its reverse in parallel by Ohlebusch, Enno, Beller, Timo, Abouelhoda, Mohamed I.

“… other. Second, we provide a parallel algorithm that, given the BWT of a string, computes the BWT of its reverse much faster than all known (parallel…”
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Reverse Engineering and Analysis of Genome-Wide Gene Regulatory Networks from Gene Expression Profiles Using High-Performance Computing by Belcastro, V., Gregoretti, F., Siciliano, V., Santoro, M., D'Angelo, G., Oliva, G., di Bernardo, Diego

“… In this work, we designed and developed a parallel computing algorithm to reverse-engineer genome-scale gene regulatory networks from thousands of gene expression profiles…”
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Parallel Computing Algorithms for Reverse-Engineering and Analysis of Genome-Wide Gene Regulatory Networks from Gene Expression Profiles by Belcastro, V, di Bernardo, Diego, Gregoretti, F, Oliva, G

“… "Reverse engineering" a gene regulatory network means to infer the edges between genes from the available experimental data…”
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The feasibility of genome-scale biological network inference using Graphics Processing Units by Thiagarajan, Raghuram, Alavi, Amir, Podichetty, Jagdeep T., Bazil, Jason N., Beard, Daniel A.

“…) and a parallel reverse engineering algorithm…”
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Reverse Logistics Optimization Based on Parallel Genetic Algorithm by Sibo Ding

“… In order to search for the optimal solution of this model, the paper proposes an algorithm based on the technique of Parallel Genetic Algorithm (PGA…”
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A high expansion implicit finite-element prestack reverse time migration method by Liu, Limin, Wang, Yun, Wang, Yong, Chen, Jing, Liu, Yanqiu

“…Building on the concepts of cohesion degree and local relaxation, we propose an integrated hierarchical equilibrium parallel finite-element reverse time migration (HEP-FE-RTM…”
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A Parallel Algorithm for Linear Programs with an Additional Reverse Convex Constraint by Liu, Shih-Mim, Papavassilopoulos, G.P.

“…A parallel method for globally minimizing a linear program with an additional reverse convex constraint is proposed which combines the outer approximation technique and the cutting plane method. Basicallyp(≤n…”
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Parallel fault diagnosis using hierarchical fuzzy Petri net by reversible and dynamic decomposition mechanism by Sarkheyli-Hägele, Arezoo, Yusoff, Yusliza, Zain, Azlan Mohd

“… To address the state explosion issue, this work introduces a parallel bidirectional reasoning algorithm for an FPN that utilizes reverse and decomposition strategies to optimize the implementation process…”
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The error analysis of the reverse saturation current of the diode in the modeling of photovoltaic modules by Wang, Gang, Zhao, Ke, Qiu, Tian, Yang, Xinsheng, Zhang, Yong, Zhao, Yong

“… We analyzed the errors at the open circuit point, and proposed an iterative algorithm to calculate the modified values of the reverse saturation current, series resistance and parallel resistance…”
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Application of Parallel Signal Processing Using Reverse Blockchain Technology in Conditions of Network Instability by Khilenko, Volodymyr, Zinchenko, Andrii, Stepanov, Oleksii, Kotuliak, Ivan, Ries, Michal

“…The theses is in line with works aimed at studying the possibility of using mathematical algorithms for parallel processing of information in reverse blockchain technology…”
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Learning Force Field Parameters from Differentiable Particle-Field Molecular Dynamics by Carrer, Manuel, Cezar, Henrique Musseli, Bore, Sigbjørn Løland, Ledum, Morten, Cascella, Michele

“… ∂-HyMD exploits an embarrassingly parallel optimization algorithm by spawning independent simulations, whose trajectories are simultaneously processed by reverse mode automatic differentiation…”
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