Search Results - Java AND python source code

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  1. 1

    Implementation of python source code comparison results with Java using bubble sort method by Insanudin, E

    ISSN: 1742-6588, 1742-6596
    Published: Bristol IOP Publishing 01.11.2019
    Published in Journal of physics. Conference series (01.11.2019)
    “…In the implementation of Python and Java source code comparison results are more focused on the scale of the ratio of the number of lines of code, file capacity, and access speed…”
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    Journal Article
  2. 2

    Quantifying cross-language code reuse via function-level clone detection by Rong, Yi, Zhou, Yan

    ISSN: 1319-1578, 2213-1248, 1319-1578
    Published: Cham Springer International Publishing 01.12.2025
    “… Our method represents code in Java and Python using a unified abstract syntax structure and semantic…”
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    Journal Article
  3. 3

    Haxe as a Swiss knife for bioinformatic applications: the SeqPHASE case story by Spöri, Yann, Flot, Jean-François

    ISSN: 1467-5463, 1477-4054, 1477-4054
    Published: England Oxford University Press 25.07.2024
    Published in Briefings in bioinformatics (25.07.2024)
    “… The Haxe compiler is well known for its ability to translate the source code of Haxe programs into the source code of a variety of other programming languages including Java, C++…”
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    Journal Article
  4. 4

    nextflu: real-time tracking of seasonal influenza virus evolution in humans by Neher, Richard A., Bedford, Trevor

    ISSN: 1367-4803, 1367-4811, 1367-4811, 1460-2059
    Published: England Oxford University Press 01.11.2015
    Published in Bioinformatics (01.11.2015)
    “…Seasonal influenza viruses evolve rapidly, allowing them to evade immunity in their human hosts and reinfect previously infected individuals. Similarly,…”
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    Journal Article
  5. 5
  6. 6

    D-GENIES: dot plot large genomes in an interactive, efficient and simple way by Cabanettes, Floréal, Klopp, Christophe

    ISSN: 2167-8359, 2167-8359
    Published: United States PeerJ, Inc 04.06.2018
    Published in PeerJ (San Francisco, CA) (04.06.2018)
    “… D-GENIES is an easy-to-install, open-source software package (GPL) developed in Python and JavaScript…”
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    Journal Article
  7. 7

    The MESSAGEix Integrated Assessment Model and the ix modeling platform (ixmp): An open framework for integrated and cross-cutting analysis of energy, climate, the environment, and sustainable development by Huppmann, Daniel, Gidden, Matthew, Fricko, Oliver, Kolp, Peter, Orthofer, Clara, Pimmer, Michael, Kushin, Nikolay, Vinca, Adriano, Mastrucci, Alessio, Riahi, Keywan, Krey, Volker

    ISSN: 1364-8152
    Published: Elsevier Ltd 01.02.2019
    “… systems need to support higher spatial and temporal resolution, facilitate integration of data sources and methodologies across disciplines, and become open and transparent regarding…”
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    Journal Article
  8. 8

    Vistrates: A Component Model for Ubiquitous Analytics by Badam, Sriram Karthik, Mathisen, Andreas, Radle, Roman, Klokmose, Clemens N., Elmqvist, Niklas

    ISSN: 1077-2626, 1941-0506, 1941-0506
    Published: United States IEEE 01.01.2019
    “…Visualization tools are often specialized for specific tasks, which turns the user's analytical workflow into a fragmented process performed across many tools…”
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    Journal Article
  9. 9

    BIODICA: a computational environment for Independent Component Analysis of omics data by Captier, Nicolas, Merlevede, Jane, Molkenov, Askhat, Seisenova, Ainur, Zhubanchaliyev, Altynbek, Nazarov, Petr V, Barillot, Emmanuel, Kairov, Ulykbek, Zinovyev, Andrei

    ISSN: 1367-4803, 1367-4811, 1460-2059, 1367-4811
    Published: Oxford University Press 13.05.2022
    Published in Bioinformatics (13.05.2022)
    “… Availability and implementation BIODICA is implemented in Java, Python and JavaScript. The source code is freely available on GitHub under the MIT and the GNU LGPL licenses. BIODICA is supported on all major operating systems. URL: https://sysbio-curie.github.io/biodica-environment/…”
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    Journal Article
  10. 10

    RAMBO-K: Rapid and Sensitive Removal of Background Sequences from Next Generation Sequencing Data by Tausch, Simon H., Renard, Bernhard Y., Nitsche, Andreas, Dabrowski, Piotr Wojciech

    ISSN: 1932-6203, 1932-6203
    Published: United States Public Library of Science 17.09.2015
    Published in PloS one (17.09.2015)
    “…The assembly of viral or endosymbiont genomes from Next Generation Sequencing (NGS) data is often hampered by the predominant abundance of reads originating…”
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    Journal Article
  11. 11

    Source code analysis dataset by Gelman, Ben, Obayomi, Banjo, Moore, Jessica, Slater, David

    ISSN: 2352-3409, 2352-3409
    Published: Elsevier Inc 01.12.2019
    Published in Data in brief (01.12.2019)
    “… The first set of pairs connects snippets of source code in C, C++, Java, and Python with their corresponding comments, which are extracted using Doxygen…”
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    Journal Article
  12. 12

    Optimizing Pre-trained Code Embeddings with Triplet Loss for Code Smell Detection by Nizam, Ali, Islamoglu, Ertugrul, Adali, Omer Kerem, Aydin, Musa

    ISSN: 2169-3536, 2169-3536
    Published: Piscataway IEEE 01.01.2025
    Published in IEEE access (01.01.2025)
    “…Code embedding represents code semantics in vector form. While existing code embedding methods have been successfully employed for various source code analysis…”
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    Journal Article
  13. 13

    Evaluating the Impact of Possible Dependencies on Architecture-Level Maintainability by Jin, Wuxia, Zhong, Dinghong, Cai, Yuanfang, Kazman, Rick, Liu, Ting

    ISSN: 0098-5589, 1939-3520
    Published: New York IEEE 01.03.2023
    Published in IEEE transactions on software engineering (01.03.2023)
    “… Dynamically typed languages, such as Python, JavaScript and Ruby, tolerate the lack of explicit type references, making certain dependencies indiscernible by a purely syntactic analysis of source code…”
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    Journal Article
  14. 14

    Visualizing the geography of genetic variants by Marcus, Joseph H, Novembre, John

    ISSN: 1367-4803, 1367-4811, 1367-4811
    Published: England Oxford University Press 15.02.2017
    Published in Bioinformatics (Oxford, England) (15.02.2017)
    “…One of the key characteristics of any genetic variant is its geographic distribution. The geographic distribution can shed light on where an allele first…”
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    Journal Article
  15. 15

    CodeS: Towards Code Model Generalization Under Distribution Shift by Hu, Qiang, Guo, Yuejun, Xie, Xiaofei, Cordy, Maxime, Papadakis, Mike, Ma, Lei, Le Traon, Yves

    ISSN: 2832-7632
    Published: IEEE 01.05.2023
    “… Specifically, CodeS supports two programming languages (Java and Python) and five shift types…”
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    Conference Proceeding
  16. 16

    GEMMER: GEnome-wide tool for Multi-scale Modeling data Extraction and Representation for Saccharomyces cerevisiae by Mondeel, Thierry D G A, Crémazy, Frédéric, Barberis, Matteo

    ISSN: 1367-4803, 1367-4811, 1460-2059, 1367-4811
    Published: England Oxford University Press 15.06.2018
    Published in Bioinformatics (15.06.2018)
    “…Abstract Motivation Multi-scale modeling of biological systems requires integration of various information about genes and proteins that are connected together…”
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    Journal Article
  17. 17

    GRAPHiC: Utilizing Graph Structures and Class Weights in Code Comment Classification with Pretrained BERT Models by Ullah Shah, Pir Sami, Saif, Shahela, Athar, Muhammad Haris, Tariq, Muhammad Riyaan, Afzal, Abdur Rehman

    Published: IEEE 27.04.2025
    “… For this problem, we present GRAPHiC, a set of classifiers designed for multi-label classification of source code comments in Java, Python, and Pharo…”
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    Conference Proceeding
  18. 18

    NerLTR-DTA: drug–target binding affinity prediction based on neighbor relationship and learning to rank by Ru, Xiaoqing, Ye, Xiucai, Sakurai, Tetsuya, Zou, Quan

    ISSN: 1367-4803, 1367-4811, 1460-2059, 1367-4811
    Published: England Oxford University Press 28.03.2022
    Published in Bioinformatics (28.03.2022)
    “…Abstract Motivation Drug–target interaction prediction plays an important role in new drug discovery and drug repurposing. Binding affinity indicates the…”
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    Journal Article
  19. 19

    CoV-Seq, a New Tool for SARS-CoV-2 Genome Analysis and Visualization: Development and Usability Study by Liu, Boxiang, Liu, Kaibo, Zhang, He, Zhang, Liang, Bian, Yuchen, Huang, Liang

    ISSN: 1438-8871, 1439-4456, 1438-8871
    Published: Canada Gunther Eysenbach MD MPH, Associate Professor 02.10.2020
    Published in Journal of medical Internet research (02.10.2020)
    “… CoV-Seq is implemented in Python and JavaScript. The web server and source code URLs are provided in this article…”
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    Journal Article
  20. 20

    Decomposition then watermarking: Enhancing code traceability with dual-channel code watermarking by Lin, Haibo, Li, Zhong, Ji, Ruihua, Pan, Minxue, Zhang, Tian, Wu, Nan, Li, Xuandong

    ISSN: 0928-8910, 1573-7535
    Published: New York Springer US 01.06.2026
    Published in Automated software engineering (01.06.2026)
    “…Code watermarking has gained increasing attention for tracing the provenance of code with the rapid growth of the open-source community…”
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    Journal Article