Search Results - Fixed-parameter algorithms AND complexity
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Scaffolding Problems Revisited: Complexity, Approximation and Fixed Parameter Tractable Algorithms, and Some Special Cases
ISSN: 0178-4617, 1432-0541Published: New York Springer US 01.06.2018Published in Algorithmica (01.06.2018)“…This paper is devoted to new results about the scaffolding problem, an integral problem of genome inference in bioinformatics. The problem consists in finding…”
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Monotone Arithmetic Complexity of Graph Homomorphism Polynomials
ISSN: 0178-4617, 1432-0541Published: New York Springer US 01.09.2023Published in Algorithmica (01.09.2023)“… These polynomials have received a lot of attention recently for their crucial role in several new algorithms for counting and detecting graph patterns, and also for obtaining natural polynomial…”
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Fixed-Parameter Complexity of Minimum Profile Problems: Parameterized and Exact Algorithms
ISSN: 0178-4617, 1432-0541Published: Heidelberg Springer 2008Published in Algorithmica (2008)Get full text
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4
Reconciling multiple genes trees via segmental duplications and losses
ISSN: 1748-7188, 1748-7188Published: London BioMed Central 20.03.2019Published in Algorithms for molecular biology (20.03.2019)“…, even when λ = 0 and a single gene tree is given, solving a long standing open problem on the complexity of multi-gene reconciliation…”
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Scheduling and fixed-parameter tractability
ISSN: 0025-5610, 1436-4646Published: Berlin/Heidelberg Springer Berlin Heidelberg 01.12.2015Published in Mathematical programming (01.12.2015)“… However, even though fixed-parameter algorithms are appealing for many reasons, no such algorithms are known for many fundamental scheduling problems…”
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Fixed-parameter algorithms for rectilinear Steiner tree and rectilinear traveling salesman problem in the plane
ISSN: 0377-2217, 1872-6860Published: Elsevier B.V 16.10.2018Published in European journal of operational research (16.10.2018)“…•A fixed-parameter algorithm for the rectilinear travelling salesman problem.•A fixed-parameter algorithm for the rectilinear Steiner tree problem…”
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Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees
ISSN: 1367-4803, 1367-4811, 1367-4811, 1460-2059Published: England Oxford University Press 15.09.2012Published in Bioinformatics (15.09.2012)“…, a process called reconciliation, yet current reconciliation algorithms model only a subset of these evolutionary processes. Results…”
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Minimal unsatisfiable formulas with bounded clause-variable difference are fixed-parameter tractable
ISSN: 0022-0000, 1090-2724Published: Elsevier Inc 01.12.2004Published in Journal of computer and system sciences (01.12.2004)“… (Parameterized Complexity, 1999). Our algorithm gives rise to a fixed-parameter tractable parameterization of the satisfiability problem…”
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9
Parameterized complexity of machine scheduling: 15 open problems
ISSN: 0305-0548, 1873-765X, 0305-0548Published: New York Elsevier Ltd 01.12.2018Published in Computers & operations research (01.12.2018)“… A novel approach to machine scheduling problems are fixed-parameter algorithms. To stimulate this thriving research direction, we propose 15 open questions…”
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On the Complexity of Some Geometric Problems With Fixed Parameters
ISSN: 1526-1719, 1526-1719Published: 01.01.2021Published in Journal of graph algorithms and applications (01.01.2021)“…The following graph-drawing problems are known to be complete for the existential theory of the reals (${\exists \mathbb{R}}$-complete) as long as the…”
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Stable Matchings with Covering Constraints: A Complete Computational Trichotomy
ISSN: 0178-4617, 1432-0541Published: New York Springer US 01.05.2020Published in Algorithmica (01.05.2020)“…; most such problems are NP -hard and also hard to approximate (Hamada et al. in Algorithmica 74(1):440–465, 2016). We therefore consider stable matching problems with lower quotas under a relaxed notion of tractability, namely fixed-parameter tractability…”
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12
Randomized Fixed-Parameter Algorithms for the Closest String Problem
ISSN: 0178-4617, 1432-0541Published: New York Springer US 01.01.2016Published in Algorithmica (01.01.2016)“… s i . The problem is NP-hard and has been extensively studied in the context of approximation algorithms and fixed-parameter algorithms…”
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On the Parameterized Complexity of Eulerian Strong Component Arc Deletion
ISSN: 0178-4617, 1432-0541Published: New York Springer US 01.11.2025Published in Algorithmica (01.11.2025)“… The complexity of the problem, when parameterized by solution size (i.e., size of the deletion set…”
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The constrained shortest common supersequence problem
ISSN: 1570-8667, 1570-8675Published: Elsevier B.V 01.07.2013Published in Journal of discrete algorithms (Amsterdam, Netherlands) (01.07.2013)“… Finally, we investigate the parameterized complexity of the problem, and we present a fixed-parameter algorithm…”
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15
Fixed-parameter algorithms for protein similarity search under mRNA structure constraints
ISSN: 1570-8667, 1570-8675Published: Elsevier B.V 2008Published in Journal of discrete algorithms (Amsterdam, Netherlands) (2008)“… In this paper we propose three fixed-parameter algorithms that apply for several interesting parameters of MRSO…”
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16
Parameterized complexity of coverage in multi-interface IoT networks: Pathwidth
ISSN: 2542-6605, 2542-6605Published: Elsevier B.V 01.12.2024Published in Internet of things (Amsterdam. Online) (01.12.2024)“…The Internet of Things (IoT) has emerged as one of the growing fields in digital technology over the past decade. A primary goal of IoT is to connect physical…”
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Recognizing Map Graphs of Bounded Treewidth
ISSN: 0178-4617, 1432-0541Published: New York Springer US 01.02.2024Published in Algorithmica (01.02.2024)“… We present a fixed-parameter tractable algorithm for recognizing map graphs parameterized by treewidth…”
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The Authorization Policy Existence Problem
ISSN: 1545-5971, 1941-0018Published: Washington IEEE 01.11.2020Published in IEEE transactions on dependable and secure computing (01.11.2020)“…Constraints such as separation-of-duty are widely used to specify requirements that supplement basic authorization policies. However, the existence of…”
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Parameterized complexity analysis for the Closest String with Wildcards problem
ISSN: 0304-3975, 1879-2294Published: Elsevier B.V 04.10.2015Published in Theoretical computer science (04.10.2015)“… Our study determines for each natural parameterization whether this parameterization yields a fixed-parameter algorithm, or whether such an algorithm is highly unlikely to exist…”
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New results on maximum induced matchings in bipartite graphs and beyond
ISSN: 0304-3975, 1879-2294Published: Elsevier B.V 25.03.2013Published in Theoretical computer science (25.03.2013)“… In this paper, we reveal several classes of bipartite (and more general) graphs for which the problem admits fixed-parameter tractable algorithms…”
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