Výsledky vyhledávání - Cold Spring Harbor Laboratory Press

Comparing Methods for Quantifying and Analyzing Drosophila Aggression Autor Trannoy, Severine, Fernandez, Maria P, Certel, Sarah J

“…Here, we highlight three different assays that are used to study aggression. The advantages and disadvantages of each assay are discussed, as examining…”
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Fighting Flies: Quantifying and Analyzing Drosophila Aggression Autor Fernandez, Maria P, Trannoy, Severine, Certel, Sarah J

“…Aggression is an innate behavior that likely evolved in the framework of defending or obtaining resources. This complex social behavior is influenced by…”
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Characterizing Mosquito Biting Behavior Using the BiteOscope Autor Murray, Gregory P D, Giraud, Emilie, Hol, Felix J H

“…The biteOscope enables the high-resolution monitoring and video recording of blood-feeding mosquitoes. Mosquito biting is induced by combining host cues, an…”
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Characterizing Mosquito Biting Behavior at High Resolution Autor Murray, Gregory P D, Giraud, Emilie, Hol, Felix J H

“…Blood feeding is a critical event in the life cycle of female mosquitoes. In addition to providing nutrients to the mosquito, blood feeding facilitates the…”
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Following Endocrine-Disrupting Effects on Gene Expression in Xenopus laevis Autor Spirhanzlova, Petra, Leemans, Michelle, Demeneix, Barbara A, Fini, Jean-Baptiste

“…Endocrine-disrupting chemicals (EDCs), found in all categories of chemicals, are suspected to be a cause of declining well-being and human health, both as…”
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The Use of Cell-Free Xenopus Extracts to Investigate Cytoplasmic Events Autor Gibeaux, Romain, Heald, Rebecca

“…Experiments using cytoplasmic extracts prepared from eggs have made important contributions to our understanding of the cell cycle, the cytoskeleton, and…”
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Roles of the immune system in cancer: from tumor initiation to metastatic progression Autor Gonzalez, Hugo, Hagerling, Catharina, Werb, Zena

“…The presence of inflammatory immune cells in human tumors raises a fundamental question in oncology: How do cancer cells avoid the destruction by immune…”
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Chromatin Interaction Analysis Using Paired-End-Tag (ChIA-PET) Sequencing in Tadpole Tissues Autor Buisine, Nicolas, Ruan, Xiaoan, Ruan, Yijun, Sachs, Laurent M

“…Proper gene expression involves communication between the regulatory elements and promoters of genes. Today, chromosome conformation capture (3C)-based methods…”
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Chromatin Immunoprecipitation for Chromatin Interaction Analysis Using Paired-End-Tag (ChIA-PET) Sequencing in Tadpole Tissues Autor Buisine, Nicolas, Ruan, Xiaoan, Ruan, Yijun, Sachs, Laurent M

“…Proper gene expression involves communication between the regulatory elements and promoters of genes. Because regulatory elements can be located over a large…”
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The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression Autor Derrien, Thomas, Johnson, Rory, Bussotti, Giovanni, Tanzer, Andrea, Djebali, Sarah, Tilgner, Hagen, Guernec, Gregory, Martin, David, Merkel, Angelika, Knowles, David G, Lagarde, Julien, Veeravalli, Lavanya, Ruan, Xiaoan, Ruan, Yijun, Lassmann, Timo, Carninci, Piero, Brown, James B, Lipovich, Leonard, Gonzalez, Jose M, Thomas, Mark, Davis, Carrie A, Shiekhattar, Ramin, Gingeras, Thomas R, Hubbard, Tim J, Notredame, Cedric, Harrow, Jennifer, Guigó, Roderic

“…The human genome contains many thousands of long noncoding RNAs (lncRNAs). While several studies have demonstrated compelling biological and disease roles for…”
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GENCODE: the reference human genome annotation for The ENCODE Project Autor Harrow, Jennifer, Frankish, Adam, Gonzalez, Jose M, Tapanari, Electra, Diekhans, Mark, Kokocinski, Felix, Aken, Bronwen L, Barrell, Daniel, Zadissa, Amonida, Searle, Stephen, Barnes, If, Bignell, Alexandra, Boychenko, Veronika, Hunt, Toby, Kay, Mike, Mukherjee, Gaurab, Rajan, Jeena, Despacio-Reyes, Gloria, Saunders, Gary, Steward, Charles, Harte, Rachel, Lin, Michael, Howald, Cédric, Tanzer, Andrea, Derrien, Thomas, Chrast, Jacqueline, Walters, Nathalie, Balasubramanian, Suganthi, Pei, Baikang, Tress, Michael, Rodriguez, Jose Manuel, Ezkurdia, Iakes, van Baren, Jeltje, Brent, Michael, Haussler, David, Kellis, Manolis, Valencia, Alfonso, Reymond, Alexandre, Gerstein, Mark, Guigó, Roderic, Hubbard, Tim J

“…The GENCODE Consortium aims to identify all gene features in the human genome using a combination of computational analysis, manual annotation, and…”
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LncATLAS database for subcellular localization of long noncoding RNAs Autor Mas-Ponte, David, Carlevaro-Fita, Joana, Palumbo, Emilio, Hermoso Pulido, Toni, Guigo, Roderic, Johnson, Rory

“…The subcellular localization of long noncoding RNAs (lncRNAs) holds valuable clues to their molecular function. However, measuring localization of newly…”
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Large-scale analysis of genome and transcriptome alterations in multiple tumors unveils novel cancer-relevant splicing networks Autor Sebestyén, Endre, Singh, Babita, Miñana, Belén, Pagès, Amadís, Mateo, Francesca, Pujana, Miguel Angel, Valcárcel, Juan, Eyras, Eduardo

“…Alternative splicing is regulated by multiple RNA-binding proteins and influences the expression of most eukaryotic genes. However, the role of this process in…”
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DNA methylation contributes to natural human variation Autor Heyn, Holger, Moran, Sebastian, Hernando-Herraez, Irene, Sayols, Sergi, Gomez, Antonio, Sandoval, Juan, Monk, Dave, Hata, Kenichiro, Marques-Bonet, Tomas, Wang, Liewei, Esteller, Manel

“…DNA methylation patterns are important for establishing cell, tissue, and organism phenotypes, but little is known about their contribution to natural human…”
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Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs Autor Tilgner, Hagen, Knowles, David G, Johnson, Rory, Davis, Carrie A, Chakrabortty, Sudipto, Djebali, Sarah, Curado, João, Snyder, Michael, Gingeras, Thomas R, Guigó, Roderic

“…Splicing remains an incompletely understood process. Recent findings suggest that chromatin structure participates in its regulation. Here, we analyze the RNA…”
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Worldwide patterns of genomic variation and admixture in gray wolves Autor Fan, Zhenxin, Silva, Pedro, Gronau, Ilan, Wang, Shuoguo, Armero, Aitor Serres, Schweizer, Rena M, Ramirez, Oscar, Pollinger, John, Galaverni, Marco, Ortega Del-Vecchyo, Diego, Du, Lianming, Zhang, Wenping, Zhang, Zhihe, Xing, Jinchuan, Vilà, Carles, Marques-Bonet, Tomas, Godinho, Raquel, Yue, Bisong, Wayne, Robert K

“…The gray wolf (Canis lupus) is a widely distributed top predator and ancestor of the domestic dog. To address questions about wolf relationships to each other…”
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The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs Autor Johnson, Rory, Guigó, Roderic

“…Our genome contains tens of thousands of long noncoding RNAs (lncRNAs), many of which are likely to have genetic regulatory functions. It has been proposed…”
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Lamins at the crossroads of mechanosignaling Autor Osmanagic-Myers, Selma, Dechat, Thomas, Foisner, Roland

“…The intermediate filament proteins, A- and B-type lamins, form the nuclear lamina scaffold adjacent to the inner nuclear membrane. B-type lamins confer…”
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IMGT/junctionanalysis: IMGT standardized analysis of the V-J and V-D-J junctions of the rearranged immunoglobulins (IG) and T cell receptors (TR) Autor Giudicelli, Véronique, Lefranc, Marie-Paule

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IMGT unique numbering for the variable (V), constant (C), and groove (G) domains of IG, TR, MH, IgSF, and MhSF Autor Lefranc, Marie-Paule

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