Výsledky vyhledávání - (( jana AND python source code ) OR ( jana AND python resource code ))

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  1. 1

    decoupleR: ensemble of computational methods to infer biological activities from omics data Autor Badia-i-Mompel, Pau, Vélez Santiago, Jesús, Braunger, Jana, Geiss, Celina, Dimitrov, Daniel, Müller-Dott, Sophia, Taus, Petr, Dugourd, Aurelien, Holland, Christian H, Ramirez Flores, Ricardo O, Saez-Rodriguez, Julio

    ISSN: 2635-0041, 2635-0041
    Vydáno: England Oxford University Press 2022
    Vydáno v Bioinformatics advances (2022)
    “…Summary Many methods allow us to extract biological activities from omics data using information from prior knowledge resources, reducing the dimensionality for increased statistical power and better interpretability…”
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    Journal Article
  2. 2

    Guide assignment in single-cell CRISPR screens using crispat Autor Braunger, Jana M, Velten, Britta

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Vydáno: England Oxford University Press 02.09.2024
    Vydáno v Bioinformatics (Oxford, England) (02.09.2024)
    “… To address this, we here propose crispat (CRISPR guide assignment tool), a Python package to facilitate the choice of a suitable guide assignment strategy for single-cell CRISPR screens…”
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    Journal Article
  3. 3

    Marginalizing Sample Consensus Autor Barath, Daniel, Noskova, Jana, Matas, Jiri

    ISSN: 0162-8828, 1939-3539, 2160-9292, 1939-3539
    Vydáno: New York IEEE 01.11.2022
    “…A new method for robust estimation, MAGSAC++, is proposed. It introduces a new model quality (scoring) function that does not make inlier-outlier decisions,…”
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    Journal Article
  4. 4

    Zebrabase: An Intuitive Tracking Solution for Aquatic Model Organisms Autor Oltova, Jana, Jindrich, Jindrich, Skuta, Ctibor, Svoboda, Ondrej, Machonova, Olga, Bartunek, Petr

    ISSN: 1557-8542, 1557-8542
    Vydáno: United States 01.12.2018
    Vydáno v Zebrafish (01.12.2018)
    “…Small fish species, such as zebrafish and medaka, are increasingly gaining popularity in basic research and disease modeling as a useful alternative to rodent…”
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    Journal Article
  5. 5

    deepFPlearn +: enhancing toxicity prediction across the chemical universe using graph neural networks Autor Soulios, Kyriakos, Scheibe, Patrick, Bernt, Matthias, Hackermüller, Jörg, Schor, Jana

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Vydáno: England Oxford University Press 01.12.2023
    Vydáno v Bioinformatics (Oxford, England) (01.12.2023)
    “…Abstract Summary Sophisticated approaches for the in silico prediction of toxicity are required to support the risk assessment of chemicals. The number of…”
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  6. 6

    Open-Source Web Service with Morphological Dictionary-Supplemented Deep Learning for Morphosyntactic Analysis of Czech Autor Straka, Milan, Straková, Jana

    ISSN: 2331-8422
    Vydáno: Ithaca Cornell University Library, arXiv.org 17.09.2024
    Vydáno v arXiv.org (17.09.2024)
    “…We present an open-source web service for Czech morphosyntactic analysis. The system combines a deep learning model with rescoring by a high-precision morphological dictionary at inference time…”
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  7. 7

    Physics-informed neural networks (P INNs): application categories, trends and impact Autor Ghalambaz, Mohammad, Sheremet, Mikhail A., Khan, Mohammed Arshad, Raizah, Zehba, Shafi, Jana

    ISSN: 0961-5539, 0961-5539, 1758-6585
    Vydáno: Bradford Emerald Publishing Limited 02.09.2024
    “… Design/methodology/approach WoS database was analyzed for PINNs using an inhouse python code…”
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  8. 8

    Guide assignment in single-cell CRISPR screens using crispat Autor Braunger, Jana M., Velten, Britta

    ISSN: 2692-8205
    Vydáno: Cold Spring Harbor Laboratory 29.07.2024
    Vydáno v bioRxiv (29.07.2024)
    “… To address this, we here propose crispat (CRISPR guide assignment tool), a Python package to facilitate the choice of a suitable guide assignment strategy for single cell CRISPR screens…”
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