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  1. 1

    Analysis of Concrete Air Voids: Comparing OpenAI-Generated Python Code with MATLAB Scripts and Enhancing 2D Image Processing Using 3D CT Scan Data by Asadi, Iman, Shpak, Andrei, Jacobsen, Stefan

    ISSN: 2075-5309, 2075-5309
    Published: Basel MDPI AG 01.12.2024
    Published in Buildings (Basel) (01.12.2024)
    “… This study explored the use of ChatGPT, an AI tool, to generate Python code for analyzing air void parameters in hardened concrete, such as total air void content (A), specific surface (α…”
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    Journal Article
  2. 2

    Decoding the JAK-STAT Axis in Colorectal Cancer with AI-HOPE-JAK-STAT: A Conversational Artificial Intelligence Approach to Clinical–Genomic Integration by Yang, Ei-Wen, Waldrup, Brigette, Velazquez-Villarreal, Enrique

    ISSN: 2072-6694, 2072-6694
    Published: Switzerland MDPI AG 17.07.2025
    Published in Cancers (17.07.2025)
    “…: AI-HOPE-JAK-STAT combines large language models (LLMs), a natural language-to-code engine, and harmonized public CRC datasets from cBioPortal…”
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    Journal Article
  3. 3

    Introduction to computational causal inference using reproducible Stata, R, and Python code: A tutorial by Smith, Matthew J., Mansournia, Mohammad A., Maringe, Camille, Zivich, Paul N., Cole, Stephen R., Leyrat, Clémence, Belot, Aurélien, Rachet, Bernard, Luque‐Fernandez, Miguel A.

    ISSN: 0277-6715, 1097-0258, 1097-0258
    Published: England Wiley Subscription Services, Inc 30.01.2022
    Published in Statistics in medicine (30.01.2022)
    “…The main purpose of many medical studies is to estimate the effects of a treatment or exposure on an outcome. However, it is not always possible to randomize…”
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    Journal Article
  4. 4

    LiPydomics: A Python Package for Comprehensive Prediction of Lipid Collision Cross Sections and Retention Times and Analysis of Ion Mobility-Mass Spectrometry-Based Lipidomics Data by Ross, Dylan H, Cho, Jang Ho, Zhang, Rutan, Hines, Kelly M, Xu, Libin

    ISSN: 1520-6882, 1520-6882
    Published: United States 17.11.2020
    Published in Analytical chemistry (Washington) (17.11.2020)
    “… Existing solutions for these data analysis challenges (i.e., multivariate statistics and lipid identification…”
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    Journal Article
  5. 5

    Percolation theory using Python by Malthe-Sørenssen, Anders

    ISBN: 3031598997, 9783031598999, 3031599004, 9783031599002
    Published: Cham Springer 2024
    “… Readers will learn how to generate, analyze, and comprehend data and models, with detailed theoretical discussions complemented by accessible computer codes…”
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    eBook Book
  6. 6

    FHIR-PYrate: a data science friendly Python package to query FHIR servers by Hosch, René, Baldini, Giulia, Parmar, Vicky, Borys, Katarzyna, Koitka, Sven, Engelke, Merlin, Arzideh, Kamyar, Ulrich, Moritz, Nensa, Felix

    ISSN: 1472-6963, 1472-6963
    Published: London BioMed Central 06.07.2023
    Published in BMC health services research (06.07.2023)
    “…Background We present FHIR-PYrate, a Python package to handle the full clinical data collection and extraction process…”
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    Journal Article
  7. 7
  8. 8

    Resolvent4py: A parallel Python package for analysis, model reduction and control of large-scale linear systems by Padovan, Alberto, Anantharaman, Vishal, Rowley, Clarence W., Vollmer, Blaine, Colonius, Tim, Bodony, Daniel J.

    ISSN: 2352-7110, 2352-7110
    Published: Elsevier B.V 01.09.2025
    Published in SoftwareX (01.09.2025)
    “…In this paper, we present resolvent4py, a parallel Python package for the analysis, model reduction and control of large-scale linear systems with millions or billions of degrees of freedom…”
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    Journal Article
  9. 9

    Nestedness for Dummies (NeD): A user friendly web interface for exploratory nestedness analysis by Strona, Giovanni, Galli, Paolo, Seveso, Davide, Montano, Simone, Fattorini, Simone

    ISSN: 1548-7660, 1548-7660
    Published: Foundation for Open Access Statistics 01.08.2014
    Published in Journal of statistical software (01.08.2014)
    “…Recent theoretical advances in nestedness analysis have led to the introduction of several alternative metrics to overcome most of the problems biasing the use of matrix 'temperature' calculated…”
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    Journal Article
  10. 10

    Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography by Wang, Yibing, Li, Changhui

    ISSN: 1083-3668, 1560-2281, 1560-2281
    Published: United States Society of Photo-Optical Instrumentation Engineers 01.06.2024
    Published in Journal of biomedical optics (01.06.2024)
    “…Photoacoustic computed tomography (PACT) is a promising non-invasive imaging technique for both life science and clinical implementations. To achieve fast…”
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    Journal Article
  11. 11

    Statistics Using Python by Campesato, Oswald

    ISBN: 9781683928805, 1683928806
    Published: Berlin Mercury Learning and Information 2024
    “…This book is designed to offer a fast-paced yet thorough introduction to essential statistical concepts using Python code samples, and aims to assist data scientists in their daily endeavors…”
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    eBook
  12. 12

    Utilizing the open-source programming language Python to create interactive Quality Assurance dashboards for diagnostic and screening performance in Cytology by Kovács, István, Székely, Tamás, Pogány, Péter, Takács, Szabolcs, Erős, Mónika, Járay, Balázs

    ISSN: 2213-2945, 2213-2945
    Published: United States Elsevier Inc 01.07.2024
    “… As a comprehensive solution, we used the Python programming language to create a dashboard application for screening and diagnostic quality metrics…”
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    Journal Article
  13. 13

    From code to reliability: Python-powered Paraconsistent Logic for alarm detection in the power gris/ Do codigo a confiabilidade: Logica Paraconsistente impulsionada por Python para a deteccao de alarmes na rede de energia by de Oliveira, Joseffe Barroso, Gino, Joao Vitor Santa Rosa, de Lima, Carlos Jose, Filho, Joao Inacio da Silva

    ISSN: 2178-9010, 2178-9010
    Published: Sindicato das Secretarias e Secretarios do Estado de Sao Paulo 01.10.2023
    Published in GeSec : Revista de Gestão e Secretariado (01.10.2023)
    “… This application enables the comparison of triggered alarms with the resultant logical states obtained during the analysis…”
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  14. 14

    An image-based modeling framework for patient-specific computational hemodynamics by Antiga, Luca, Piccinelli, Marina, Botti, Lorenzo, Ene-Iordache, Bogdan, Remuzzi, Andrea, Steinman, David A.

    ISSN: 0140-0118, 1741-0444, 1741-0444
    Published: Berlin/Heidelberg Springer-Verlag 01.11.2008
    “… The framework takes advantage of the integration of image processing, geometric analysis and mesh generation techniques, with an accent on full automation and high-level interaction…”
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  15. 15

    A learning trajectory for developing computational thinking in prospective mathematics teachers through Python programming in Google Colab by Edi Irawan, Moh. Khoridatul Huda, Ratni Purwasih

    ISSN: 2715-6095, 2715-6109
    Published: Fakultas Tarbiyah Universitas Ibrahimy 15.06.2025
    Published in Alifmatika (15.06.2025)
    “… This study aimed to design a hypothetical learning trajectory (HLT) for developing CT using Python programming on Google Colab…”
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    Journal Article
  16. 16

    Bayesian modelling of time series data (BayModTS)—a FAIR workflow to process sparse and highly variable data by Höpfl, Sebastian, Albadry, Mohamed, Dahmen, Uta, Herrmann, Karl-Heinz, Kindler, Eva Marie, König, Matthias, Reichenbach, Jürgen Rainer, Tautenhahn, Hans-Michael, Wei, Weiwei, Zhao, Wan-Ting, Radde, Nicole Erika

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Published: England Oxford University Press 02.05.2024
    Published in Bioinformatics (Oxford, England) (02.05.2024)
    “…Motivation Systems biology aims to better understand living systems through mathematical modelling of experimental and clinical data. A pervasive challenge in…”
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    Journal Article
  17. 17

    MIScnn: a framework for medical image segmentation with convolutional neural networks and deep learning by Müller, Dominik, Kramer, Frank

    ISSN: 1471-2342, 1471-2342
    Published: London BioMed Central 18.01.2021
    Published in BMC medical imaging (18.01.2021)
    “… analysis, metrics, a library with state-of-the-art deep learning models and model utilization like training, prediction, as well as fully automatic evaluation (e.g. cross-validation…”
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    Journal Article
  18. 18

    When Does Scaffolding Provide Too Much Assistance? A Code-Tracing Tutor Investigation by Jennings, Jay, Muldner, Kasia

    ISSN: 1560-4292, 1560-4306
    Published: New York Springer New York 01.12.2021
    “… To address this, we designed a Code Tracing  (CT)-Tutor. We varied the level of assistance provided in the tutor, based on (1…”
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  19. 19

    Rapid development of image analysis research tools: Bridging the gap between researcher and clinician with pyOsiriX by Blackledge, Matthew D., Collins, David J., Koh, Dow-Mu, Leach, Martin O.

    ISSN: 0010-4825, 1879-0534, 1879-0534
    Published: United States Elsevier Ltd 01.02.2016
    Published in Computers in biology and medicine (01.02.2016)
    “…We present pyOsiriX, a plugin built for the already popular dicom viewer OsiriX that provides users the ability to extend the functionality of OsiriX through simple Python scripts…”
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  20. 20

    Stereological quantification of microvessels using semiautomated evaluation of X-ray microtomography of hepatic vascular corrosion casts by Jiřík, Miroslav, Tonar, Zbyněk, Králíčková, Anna, Eberlová, Lada, Mírka, Hynek, Kochová, Petra, Gregor, Tomáš, Hošek, Petr, Svobodová, Miroslava, Rohan, Eduard, Králíčková, Milena, Liška, Václav

    ISSN: 1861-6410, 1861-6429, 1861-6429
    Published: Berlin/Heidelberg Springer Berlin Heidelberg 01.10.2016
    “…Purpose Quantitative description of hepatic microvascular bed could contribute to understanding perfusion CT imaging…”
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