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Percolation theory using Python by Malthe-Sørenssen, Anders

“… Readers will learn how to generate, analyze, and comprehend data and models, with detailed theoretical discussions complemented by accessible computer codes…”
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Statistics Using Python by Campesato, Oswald

“…This book is designed to offer a fast-paced yet thorough introduction to essential statistical concepts using Python code samples, and aims to assist data scientists in their daily endeavors…”
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Spatial Analysis Using Big Data by Hajime Seya, Yoshiki Yamagata

“…Spatial Analysis Using Big Data: Methods and Urban Applications helps readers understand the most powerful, state-of-the-art spatial econometric methods, focusing particularly on urban research problems…”
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NeuroPycon: An open-source python toolbox for fast multi-modal and reproducible brain connectivity pipelines by Meunier, David, Pascarella, Annalisa, Altukhov, Dmitrii, Jas, Mainak, Combrisson, Etienne, Lajnef, Tarek, Bertrand-Dubois, Daphné, Hadid, Vanessa, Alamian, Golnoush, Alves, Jordan, Barlaam, Fanny, Saive, Anne-Lise, Dehgan, Arthur, Jerbi, Karim

“… NeuroPycon is an open-source multi-modal brain data analysis toolkit which provides Python-based template pipelines for advanced multi-processing of MEG, EEG, functional and anatomical MRI data…”
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mesas.py v1.0: a flexible Python package for modeling solute transport and transit times using StorAge Selection functions by Harman, Ciaran J., Xu Fei, Esther

“…, and in the transport dynamics. SAS is currently the state-of-the-art approach to interpreting tracer transport…”
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Hitac: a hierarchical taxonomic classifier for fungal ITS sequences compatible with QIIME2 by Miranda, Fábio M., Azevedo, Vasco C., Ramos, Rommel J., Renard, Bernhard Y., Piro, Vitor C.

“…Background Fungi play a key role in several important ecological functions, ranging from organic matter decomposition to symbiotic associations with plants…”
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Single-cell sequencing to multi-omics: technologies and applications by Wu, Xiangyu, Yang, Xin, Dai, Yunhan, Zhao, Zihan, Zhu, Junmeng, Guo, Hongqian, Yang, Rong

“… Single-cell RNA sequencing (scRNA-seq) is revolutionizing biomedical science by analyzing cellular state and intercellular heterogeneity…”
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PeptideBuilder: A simple Python library to generate model peptides by Tien, Matthew Z., Sydykova, Dariya K., Meyer, Austin G., Wilke, Claus O.

“… For example, using our library, one can generate a model of a set of amino acids in a specific conformation using just a few lines of python code…”
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Mathematical Modeling in Systems Biology

“…The reprint presents a collection of systems biology-related topics and new studies that utilize computational, mathematical, and systems-oriented approaches…”
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From code to reliability: Python-powered Paraconsistent Logic for alarm detection in the power gris/ Do codigo a confiabilidade: Logica Paraconsistente impulsionada por Python para a deteccao de alarmes na rede de energia by de Oliveira, Joseffe Barroso, Gino, Joao Vitor Santa Rosa, de Lima, Carlos Jose, Filho, Joao Inacio da Silva

“… This application enables the comparison of triggered alarms with the resultant logical states obtained during the analysis…”
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MultiNMRFit: a software to fit 1D and pseudo-2D NMR spectra by Millard, Pierre, Le Grégam, Loïc, Dubiley, Svetlana, Gabrielli, Valeria, Gosselin-Monplaisir, Thomas, Lippens, Guy, Charlier, Cyril

“…Abstract Motivation Nuclear Magnetic Resonance (NMR) is widely used for quantitative analysis of metabolic systems…”
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ASAHM: A Python module for hybrid FFF (Fused Filament Fabrication)/CNC (computer numerically controlled) manufacturing by Tejada Martinez, Luis Vincent, Coulibaly, Ibrahim, Witz, Jean-François, Weisrock, Antoine, Lesaffre, François, Boidin, Xavier, Najjar, Denis

“…In this article we introduce a Python module named’ ASAHM’ (Automated Subtractive Additive Hybrid Manufacturing…”
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TOUGH3-FLAC3D: a modeling approach for parallel computing of fluid flow and geomechanics by Rinaldi, Antonio P., Rutqvist, Jonny, Luu, Keurfon, Blanco-Martín, Laura, Hu, Mengsu, Sentís, Manuel L., Eberle, Leandra, Kaestli, Philipp

“…The recent development of the TOUGH3 code allows for a faster and more reliable fluid flow simulator…”
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Computer-Assisted 3D Kinematic Analysis of All Leg Joints in Walking Insects by Bender, John A., Simpson, Elaine M., Ritzmann, Roy E.

“…High-speed video can provide fine-scaled analysis of animal behavior. However, extracting behavioral data from video sequences is a time-consuming, tedious, subjective task…”
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A Deep Learning-Based Assistive System for the Visually Impaired Using YOLO-V7 by Omar Kanaan Taha Alsultan, Mohammad Tarik Mohammad

“… Upon object identification, the name of the item is converted into a Braille-readable format using the Python Braille library…”
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Leveraging machine learning for accurate DNBR prediction using python by Mohamed Y.M. Mohsen, Meshari Al Meshari, Yasser Alzamil, Abdulrahman Alhammad, Khaled Alenazi, Atef El-Taher, Tarek F. Nagla, Mohamed A.E. Abdel-Rahman

“…This study investigates the viability of using Python scikit-learn packages, specifically regression techniques, to forecast the departure from nucleate boiling ratio (DNBR…”
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ribofootPrinter: A precision python toolbox for analysis of ribosome profiling data by Kerkhofs, Kyra, Guydosh, Nicholas R

“… We therefore introduce ribofootPrinter, a suite of Python tools designed to offer an accessible and modifiable set of code for analysis of data from ribosome profiling and related types of small RNA…”
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RecGen: No-Coding Shell of Rule-Based Expert System with Digital Twin and Capability-Driven Approach Elements for Building Recommendation Systems by Kodors, Sergejs, Apeinans, Ilmars, Zarembo, Imants, Lonska, Jelena

“… To support this architecture, an open-source no-coding shell RecGen has been developed (Python and Django framework…”
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AXZ viewer: a web application to visualize unprocessed AFM-IR data by Duverger, Wouter, Ramer, Georg, Louros, Nikolaos, Schymkowitz, Joost, Rousseau, Frederic

“… It also exposes all metadata recorded by the microscope at the time of measurement. The web application is based on a Python package that supports custom data analyses within the scientific Python ecosystem…”
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PyPhi: A toolbox for integrated information theory by Mayner, William G. P., Marshall, William, Albantakis, Larissa, Findlay, Graham, Marchman, Robert, Tononi, Giulio

“… Here, we introduce PyPhi, a Python software package that implements this framework for causal analysis and unfolds the full cause-effect structure of discrete dynamical systems of binary elements…”
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