Suchergebnisse - (( (staten OR state) python code analysis ) OR ( (studiene OR studies) python code analysis ))*

  1. 1

    PBjam: A Python Package for Automating Asteroseismology of Solar-like Oscillators von Nielsen, M. B., Davies, G. R., Ball, W. H., Lyttle, A. J., Li 李坦, T. 达, Hall, O. J., Chaplin, W. J., Gaulme, P., Carboneau, L., Ong 王加, J. M. J. 冕, García, R. A., Mosser, B., Roxburgh, I. W., Corsaro, E., Benomar, O., Moya, A., Lund, M. N.

    ISSN: 0004-6256, 1538-3881, 1538-3881
    Veröffentlicht: Madison IOP Publishing 01.02.2021
    Veröffentlicht in The Astronomical journal (01.02.2021)
    “… So far the process of performing an asteroseismic analysis of a star has remained somewhat esoteric and inaccessible to nonexperts …”
    Volltext
    Journal Article
  2. 2

    SBML2HYB: a Python interface for SBML compatible hybrid modeling von Pinto, José, Costa, Rafael S, Alexandre, Leonardo, Ramos, João, Oliveira, Rui

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Veröffentlicht: England Oxford University Press 01.01.2023
    Veröffentlicht in Bioinformatics (Oxford, England) (01.01.2023)
    “… Abstract Summary Here, we present sbml2hyb, an easy-to-use standalone Python tool that facilitates the conversion of existing mechanistic models of biological systems in Systems Biology Markup Language (SBML …”
    Volltext
    Journal Article
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    Snakes on a Spaceship - An Overview of Python in Heliophysics von Burrell, A.G., Halford, A., Klenzing, J., Stoneback, R. A., Morley, S. K., Annex, A. M., Laundal, K. M., Kellerman, A. C., Stansby, D., Ma, J.

    ISSN: 2169-9380, 2169-9402
    Veröffentlicht: Goddard Space Flight Center AGU - American Geophysical Union 01.12.2018
    “… Computational analysis has become ubiquitous within the heliophysics community. However, community standards for peer review of codes and analysis have lagged behind these developments …”
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    MechElastic: A Python library for analysis of mechanical and elastic properties of bulk and 2D materials von Singh, Sobhit, Lang, Logan, Dovale-Farelo, Viviana, Herath, Uthpala, Tavadze, Pedram, Coudert, François-Xavier, Romero, Aldo H.

    ISSN: 0010-4655, 1879-2944
    Veröffentlicht: United States Elsevier B.V 01.10.2021
    Veröffentlicht in Computer physics communications (01.10.2021)
    “… The MechElastic Python package evaluates the mechanical and elastic properties of bulk and 2D materials using the elastic coefficient matrix (Cij …”
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  5. 5

    Python code smells detection using conventional machine learning models von Sandouka, Rana, Aljamaan, Hamoud

    ISSN: 2376-5992, 2376-5992
    Veröffentlicht: United States PeerJ. Ltd 29.05.2023
    Veröffentlicht in PeerJ. Computer science (29.05.2023)
    “… Therefore, code smell detection is important in software building. Recent studies utilized machine learning algorithms for code smell detection …”
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  6. 6

    pyMBE: The Python-based molecule builder for ESPResSo von Beyer, David, Torres, Paola B, Pineda, Sebastian P, Narambuena, Claudio F, Grad, Jean-Noël, Košovan, Peter, Blanco, Pablo M

    ISSN: 1089-7690, 1089-7690
    Veröffentlicht: United States 14.07.2024
    Veröffentlicht in The Journal of chemical physics (14.07.2024)
    “… We present the Python-based Molecule Builder for ESPResSo (pyMBE), an open source software application to design custom coarse-grained (CG …”
    Weitere Angaben
    Journal Article
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    VAMPyR-A high-level Python library for mathematical operations in a multiwavelet representation von Bjørgve, Magnar, Tantardini, Christian, Jensen, Stig Rune, Gerez S, Gabriel A, Wind, Peter, Di Remigio Eikås, Roberto, Dinvay, Evgueni, Frediani, Luca

    ISSN: 1089-7690, 1089-7690
    Veröffentlicht: United States 28.04.2024
    Veröffentlicht in The Journal of chemical physics (28.04.2024)
    “… ), they provide a framework that narrows the gap between the theoretical formalism of the fundamental equations and the practical implementation in a working code …”
    Weitere Angaben
    Journal Article
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    COBRApy: COnstraints-Based Reconstruction and Analysis for Python von Ebrahim, Ali, Lerman, Joshua A, Palsson, Bernhard O, Hyduke, Daniel R

    ISSN: 1752-0509, 1752-0509
    Veröffentlicht: London BioMed Central 08.08.2013
    Veröffentlicht in BMC systems biology (08.08.2013)
    “… Background COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely used for genome-scale modeling of metabolic networks in both prokaryotes and eukaryotes …”
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    Journal Article
  9. 9

    Gnocis: An integrated system for interactive and reproducible analysis and modelling of cis-regulatory elements in Python 3 von Bredesen-Aa, Bjørn André, Rehmsmeier, Marc

    ISSN: 1932-6203, 1932-6203
    Veröffentlicht: San Francisco Public Library of Science 09.09.2022
    Veröffentlicht in PloS one (09.09.2022)
    “… methods for the genome-wide prediction of candidate CREs. We here present Gnocis, a Python package that streamlines the analysis and the modelling of CRE sequences …”
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    Journal Article
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    PETAL: a Python tool for deep analysis of biological pathways von Sgroi, Giuseppe, Russo, Giulia, Pappalardo, Francesco

    ISSN: 1367-4803, 1367-4811, 1367-4811
    Veröffentlicht: England Oxford University Press 01.04.2021
    Veröffentlicht in Bioinformatics (Oxford, England) (01.04.2021)
    “… Here, we developed PETAL, a Python tool that automatically explores and detects the most relevant nodes within a KEGG pathway, scanning and performing an in-depth search …”
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    Journal Article
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    Pytim: A python package for the interfacial analysis of molecular simulations von Sega, Marcello, Hantal, György, Fábián, Balázs, Jedlovszky, Pál

    ISSN: 0192-8651, 1096-987X, 1096-987X
    Veröffentlicht: United States Wiley Subscription Services, Inc 30.09.2018
    Veröffentlicht in Journal of computational chemistry (30.09.2018)
    “… The code implements several algorithms for the identification of instantaneous interfaces of arbitrary shape, and analysis tools written specifically for the study of interfacial properties, such as intrinsic profiles …”
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    Journal Article
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    Kssdtree: an interactive Python package for phylogenetic analysis based on sketching technique von Yang, Hang, Lu, Xiaoxin, Chang, Jiaxing, Chang, Qing, Zheng, Wen, Chen, Zehua, Yi, Huiguang

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Veröffentlicht: England Oxford University Press 01.10.2024
    Veröffentlicht in Bioinformatics (Oxford, England) (01.10.2024)
    “… These limitations collectively impede the overall convenience and efficiency of the analysis. In this study, we introduce Kssdtree, an interactive Python package designed to address these challenges …”
    Volltext
    Journal Article
  13. 13

    A Study of Large Language Models in Detecting Python Code Violations von Mohammed Salih, Hekar A., Sarhan, Qusay I.

    ISSN: 2410-9355, 2307-549X
    Veröffentlicht: Koya University 01.10.2025
    Veröffentlicht in ARO (Koya) (01.10.2025)
    “… This study investigates the effectiveness of large language models (LLMs) compared to traditional static code analysis tools in detecting Python coding violations …”
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    Journal Article
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    MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics von Haiman, Zachary B., Zielinski, Daniel C., Koike, Yuko, Yurkovich, James T., Palsson, Bernhard O.

    ISSN: 1553-7358, 1553-734X, 1553-7358
    Veröffentlicht: United States Public Library of Science 28.01.2021
    Veröffentlicht in PLoS computational biology (28.01.2021)
    “… MASSpy adds dynamic modeling tools to the COnstraint-Based Reconstruction and Analysis Python (COBRApy …”
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    Journal Article
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    LLM-Based Test-Driven Interactive Code Generation: User Study and Empirical Evaluation von Fakhoury, Sarah, Naik, Aaditya, Sakkas, Georgios, Chakraborty, Saikat, Lahiri, Shuvendu K.

    ISSN: 0098-5589, 1939-3520
    Veröffentlicht: New York IEEE 01.09.2024
    Veröffentlicht in IEEE transactions on software engineering (01.09.2024)
    “… Through a mixed methods user study with 15 programmers, we present an empirical evaluation of the effectiveness of the workflow to improve code generation accuracy …”
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    ColiCoords: A Python package for the analysis of bacterial fluorescence microscopy data von Smit, Jochem H., Li, Yichen, Warszawik, Eliza M., Herrmann, Andreas, Cordes, Thorben

    ISSN: 1932-6203, 1932-6203
    Veröffentlicht: United States Public Library of Science 19.06.2019
    Veröffentlicht in PloS one (19.06.2019)
    “… Single-molecule fluorescence microscopy studies of bacteria provide unique insights into the mechanisms of cellular processes and protein machineries in ways that are unrivalled by any other …”
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    Discovering Repetitive Code Changes in Python ML Systems von Dilhara, Malinda, Ketkar, Ameya, Sannidhi, Nikhith, Dig, Danny

    ISSN: 1558-1225
    Veröffentlicht: ACM 01.05.2022
    “… To fill the knowledge gap and advance the science and tooling in ML software evolution, we conducted the first and most fine-grained study on code change patterns in a diverse corpus of 1000 top …”
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    BatAnalysis: A Comprehensive Python Pipeline for Swift BAT Survey Analysis von Parsotan, Tyler, Laha, Sibasish, Palmer, David M., Lien, Amy, Cenko, S. Bradley, Krimm, Hans, Markwardt, Craig

    ISSN: 0004-637X, 1538-4357
    Veröffentlicht: Goddard Space Flight Center The American Astronomical Society 01.08.2023
    Veröffentlicht in The Astrophysical journal (01.08.2023)
    “… The Swift Burst Alert Telescope (BAT) is a coded aperture gamma-ray instrument with a large field of view that primarily operates in survey mode when it is not …”
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    fv3gfs-wrapper: a Python wrapper of the FV3GFS atmospheric model von McGibbon, Jeremy, Brenowitz, Noah D., Cheeseman, Mark, Clark, Spencer K., Dahm, Johann P. S., Davis, Eddie C., Elbert, Oliver D., George, Rhea C., Harris, Lucas M., Henn, Brian, Kwa, Anna, Perkins, W. Andre, Watt-Meyer, Oliver, Wicky, Tobias F., Bretherton, Christopher S., Fuhrer, Oliver

    ISSN: 1991-9603, 1991-959X, 1991-962X, 1991-9603, 1991-962X
    Veröffentlicht: Katlenburg-Lindau Copernicus GmbH 16.07.2021
    Veröffentlicht in Geoscientific Model Development (16.07.2021)
    “… As a result, researchers who use high-productivity languages for exploratory work often find these codes hard to understand, hard to modify, and hard to integrate with their analysis tools …”
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    PyGEE-SWToolbox: A Python Jupyter Notebook Toolbox for Interactive Surface Water Mapping and Analysis Using Google Earth Engine von Owusu, Collins, Snigdha, Nusrat J., Martin, Mackenzie T., Kalyanapu, Alfred J.

    ISSN: 2071-1050, 2071-1050
    Veröffentlicht: Basel MDPI AG 01.03.2022
    Veröffentlicht in Sustainability (01.03.2022)
    “… challenges. PyGEE-SWToolbox is a freely available Google Earth Engine-enabled open-source toolbox developed with Python to be run in Jupyter Notebooks that provides an easy-to-use graphical user interface (GUI …”
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    Journal Article