Výsledky vyhledávání - (( (state OR statni) python code analysis ) OR ( state:mn python code analysis ))~
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Combining Astrometry and Elemental Abundances: The Case of the Candidate Pre-Gaia Halo Moving Groups G03-37, G18-39, and G21-22
ISSN: 0004-6256, 1538-3881, 1538-3881Vydáno: Madison IOP Publishing 01.09.2021Vydáno v The Astronomical journal (01.09.2021)“… Using a new Python code that uses a Bayesian method to self…”
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Minimizing the number of optimizations for efficient community dynamic flux balance analysis
ISSN: 1553-7358, 1553-734X, 1553-7358Vydáno: San Francisco Public Library of Science 29.09.2020Vydáno v PLoS computational biology (29.09.2020)“…Dynamic flux balance analysis uses a quasi-steady state assumption to calculate an organism's metabolic activity at each time-step of a dynamic simulation, using the well-known technique of flux balance analysis…”
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Vespa: Integrated applications for RF pulse design, spectral simulation and MRS data analysis
ISSN: 0740-3194, 1522-2594, 1522-2594Vydáno: United States Wiley Subscription Services, Inc 01.09.2023Vydáno v Magnetic resonance in medicine (01.09.2023)“…Purpose The Vespa package (Versatile Simulation, Pulses, and Analysis) is described and demonstrated…”
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PyLAT: Python LAMMPS Analysis Tools
ISSN: 1549-960XVydáno: United States 22.04.2019Vydáno v Journal of chemical information and modeling (22.04.2019)“… Here we describe a suite of open-source Python-based postprocessing routines we have developed called PyLAT…”
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GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
ISSN: 1367-4811, 1367-4803, 1367-4811Vydáno: England Oxford University Press 01.01.2023Vydáno v Bioinformatics (Oxford, England) (01.01.2023)“…Abstract Motivation Gene set enrichment analysis (GSEA) is a commonly used algorithm for characterizing gene expression changes…”
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Pyteomics—a Python Framework for Exploratory Data Analysis and Rapid Software Prototyping in Proteomics
ISSN: 1044-0305, 1879-1123, 1879-1123Vydáno: New York Springer-Verlag 01.02.2013Vydáno v Journal of the American Society for Mass Spectrometry (01.02.2013)“…Pyteomics is a cross-platform, open-source Python library providing a rich set of tools for MS-based proteomics…”
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VULCAN: An Open-source, Validated Chemical Kinetics Python Code for Exoplanetary Atmospheres
ISSN: 0067-0049, 1538-4365Vydáno: United States The American Astronomical Society 01.02.2017Vydáno v The Astrophysical journal. Supplement series (01.02.2017)“…We present an open-source and validated chemical kinetics code for studying hot exoplanetary atmospheres, which we name VULCAN…”
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stk: A python toolkit for supramolecular assembly
ISSN: 0192-8651, 1096-987X, 1096-987XVydáno: Hoboken, USA John Wiley & Sons, Inc 05.09.2018Vydáno v Journal of computational chemistry (05.09.2018)“… stk is a modular, extensible and open‐source Python library that provides a simple Python API and integration with third party computational codes…”
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MechElastic: A Python library for analysis of mechanical and elastic properties of bulk and 2D materials
ISSN: 0010-4655, 1879-2944Vydáno: United States Elsevier B.V 01.10.2021Vydáno v Computer physics communications (01.10.2021)“…The MechElastic Python package evaluates the mechanical and elastic properties of bulk and 2D materials using the elastic coefficient matrix (Cij…”
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scFates: a scalable python package for advanced pseudotime and bifurcation analysis from single-cell data
ISSN: 1367-4811, 1367-4803, 1367-4811Vydáno: England Oxford University Press 01.01.2023Vydáno v Bioinformatics (Oxford, England) (01.01.2023)“…Abstract Summary scFates provides an extensive toolset for the analysis of dynamic trajectories comprising tree learning, feature association testing, branch differential expression and with a…”
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The fast azimuthal integration Python library: pyFAI
ISSN: 1600-5767, 0021-8898, 1600-5767Vydáno: 5 Abbey Square, Chester, Cheshire CH1 2HU, England International Union of Crystallography 01.04.2015Vydáno v Journal of applied crystallography (01.04.2015)“… It is written in Python (with binary submodules for improved performance), a language widely accepted and used by the scientific community today, which enables users to easily incorporate the pyFAI library into their processing pipeline…”
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pyIAST: Ideal adsorbed solution theory (IAST) Python package
ISSN: 0010-4655, 1879-2944Vydáno: Netherlands Elsevier B.V 01.03.2016Vydáno v Computer physics communications (01.03.2016)“… We present an open-source, user-friendly Python package, pyIAST, to perform IAST calculations for an arbitrary number of components…”
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PHOTONAI—A Python API for rapid machine learning model development
ISSN: 1932-6203, 1932-6203Vydáno: San Francisco Public Library of Science 21.07.2021Vydáno v PloS one (21.07.2021)“…PHOTONAI is a high-level Python API designed to simplify and accelerate machine learning model development…”
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SciPy 1.0: fundamental algorithms for scientific computing in Python
ISSN: 1548-7091, 1548-7105, 1548-7105Vydáno: New York Nature Publishing Group US 01.03.2020Vydáno v Nature methods (01.03.2020)“… Since its initial release in 2001, SciPy has become a de facto standard for leveraging scientific algorithms in Python, with over 600 unique code contributors, thousands of dependent packages…”
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PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
ISSN: 1932-6203, 1932-6203Vydáno: United States Public Library of Science 06.08.2025Vydáno v PloS one (06.08.2025)“… PyNoetic is one of the very few frameworks in Python that encompasses the entire BCI design pipeline, from stimulus presentation and data…”
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Quasiclassical sampling and Wigner sampling of initial vibrational coordinates and momenta for polyatomic molecules in Monte Carlo molecular dynamics simulations
ISSN: 0026-8976, 1362-3028Vydáno: Abingdon Taylor & Francis 18.10.2025Vydáno v Molecular physics (18.10.2025)“… molecules, namely, fixed-energy vibrational-state-selected initial conditions and thermal initial conditions…”
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The Design of SimpleITK
ISSN: 1662-5196, 1662-5196Vydáno: Switzerland Frontiers Research Foundation 01.01.2013Vydáno v Frontiers in neuroinformatics (01.01.2013)“… Initially, ITK provided a direct wrapping interface to languages such as Python and Tcl through the WrapITK system…”
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pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
ISSN: 1471-2105, 1471-2105Vydáno: London BioMed Central 07.12.2023Vydáno v BMC bioinformatics (07.12.2023)“… Results In this technical note, we present a new Python implementation of ComBat and ComBat-Seq…”
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Snakes on a Spaceship - An Overview of Python in Heliophysics
ISSN: 2169-9380, 2169-9402Vydáno: Goddard Space Flight Center AGU - American Geophysical Union 01.12.2018Vydáno v Journal of geophysical research : Space physics (2013 - Present) (01.12.2018)“…Computational analysis has become ubiquitous within the heliophysics community. However, community standards for peer review of codes and analysis have lagged behind these developments…”
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DQC: A Python program package for differentiable quantum chemistry
ISSN: 1089-7690Vydáno: United States 28.02.2022Vydáno v The Journal of chemical physics (28.02.2022)“… Here, we present an open-source differentiable quantum chemistry simulation code and explore applications facilitated by automatic differentiation: (1) calculating molecular perturbation properties, (2) reoptimizing a basis set for hydrocarbons, (3) checking the stability of self-consistent field wave functions, and (4) predicting molecular properties via alchemical perturbations…”
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