Search Results - (("source python toolkit") OR ("resource python toolkit"))

InletTracker: An open-source Python toolkit for historic and near real-time monitoring of coastal inlets from Landsat and Sentinel-2 by Heimhuber, Valentin, Vos, Kilian, Fu, Wanru, Glamore, William

“…Despite their global abundance and high ecological and socio-economic significance, the dynamics of coastal inlets often remain poorly quantified at…”
Get full text

PyLUSAT: An open-source Python toolkit for GIS-based land use suitability analysis by Chen, Changjie, Judge, Jasmeet, Hulse, David

“…Desktop software applications, such as ArcGIS and QGIS, provide GIS tools for conducting suitability analysis, a fundamental step in formulating a land-use…”
Get full text

pyEDA: An Open-Source Python Toolkit for Pre-processing and Feature Extraction of Electrodermal Activity by Hossein Aqajari, Seyed Amir, Naeini, Emad Kasaeyan, Mehrabadi, Milad Asgari, Labbaf, Sina, Dutt, Nikil, Rahmani, Amir M.

“…Physiological response is an automatic reaction that triggers a physical response to a stimulus such as stress, emotion, pain, etc. Examples include changes in…”
Get full text

SuperCCM: An Open Source Python Toolkit for Automated Quantification of Corneal Nerve Fibers in Confocal Microscopy Images by Qiao, Qincheng, Ren, Tongxin, Chen, Li, Hou, Xinguo

“…Corneal confocal microscopy (CCM) is a powerful tool for detecting early signs of neurodegenerative diseases by analyzing the corneal nerve fiber morphology…”
Get full text

STEMTooL: An Open Source Python Toolkit for Analyzing Electron Microscopy Datasets by Mukherjee, Debangshu, Unocic, Raymond

Get full text

PyLUSAT: An open-source Python toolkit for GIS-based land use suitability analysis by Chen, Changjie, Judge, Jasmeet, Hulse, David

“…Desktop GIS applications, such as ArcGIS and QGIS, provide tools essential for conducting suitability analysis, an activity that is central in formulating a…”
Get full text

InletTracker: An open-source Python toolkit for historic and near real-time monitoring of coastal inlets from Landsat and Sentinel-2 by Heimhuber, Valentin, Vos, Kilian, Fu, Wanru, Glamore, William

“…Despite their global abundance and high ecological and socio-economic significance, the dynamics of coastal inlets often remain poorly quantified at…”
Get full text

STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping by Clifton, Kalen, Anant, Manjari, Aihara, Gohta, Atta, Lyla, Aimiuwu, Osagie K., Kebschull, Justus M., Miller, Michael I., Tward, Daniel, Fan, Jean

“…Spatial transcriptomics (ST) technologies enable high throughput gene expression characterization within thin tissue sections. However, comparing spatial…”
Get full text

Flare Statistics for Young Stars from a Convolutional Neural Network Analysis of TESS Data by Feinstein, Adina D., Montet, Benjamin T., Ansdell, Megan, Nord, Brian, Bean, Jacob L., Günther, Maximilian N., Gully-Santiago, Michael A., Schlieder, Joshua E.

“…All-sky photometric time-series missions have allowed for the monitoring of thousands of young (t(age) < 800 Myr) stars in order to understand the evolution of…”
Get full text

Sleep Identification Enabled by Supervised Training Algorithms (SIESTA): An Open-Source Platform for Automatic Sleep Staging of Rodent Electrocorticographic and Electromyographic Data by Beck, Asad I, Caldart, Carlos S, Ben-Hamo, Miriam, Weil, Tenley A, Perez, Jazmine G, Kalume, Franck, Brunton, Bingni W, de la Iglesia, Horacio O, Sanchez, Raymond E A

“… To circumvent this problem, we developed an open-source Python toolkit, Sleep Identification Enabled by Supervised Training Algorithms (SIESTA…”
Get more information

OpenSoundscape: An open‐source bioacoustics analysis package for Python by Lapp, Sam, Rhinehart, Tessa, Freeland‐Haynes, Louis, Khilnani, Jatin, Syunkova, Alexandra, Kitzes, Justin

“… We provide a robust and open‐source Python toolkit for detecting and localizing biological sounds in acoustic data…”
Get full text

The PhotoDissociation Region Toolbox: Software and Models for Astrophysical Analysis by Pound, Marc W., Wolfire, Mark G.

“… stars with the gas and dust in the Milky Way and in other galaxies. It consists of an open-source Python toolkit and photodissociation region (PDR…”
Get full text

AutoRevDock: An open‐source toolkit for scalable reverse docking by Luo, Qing, Mu, Yuguang, Zheng, Liangzhen, Guo, Jingjing

“… To overcome these challenges, we present AutoRevDock, an open‐source Python toolkit designed to streamline and enhance the reverse docking workflow…”
Get full text

A pre-training enhanced deep learning framework for robust sparse unmixing in chemical imaging by Wang, Yue, Liu, Anqi, Tan, Lin, Sun, Jinyu, Zhang, Hailiang, Xie, Ting, Zhang, Zhimin, Lu, Hongmei

“…Chemical imaging techniques, such as hyperspectral and Raman imaging, provide spatially resolved spectral insights for non-destructive analysis of complex…”
Get full text

Gaussian Process Regression for foreground removal in H i Intensity Mapping experiments by Soares, Paula S, Watkinson, Catherine A, Cunnington, Steven, Pourtsidou, Alkistis

“… i intensity mapping, and present an open-source python toolkit for doing so. We use MeerKAT and SKA1-MID-like simulations of 21 cm foregrounds…”
Get full text

LinChemIn: Route Arithmetic─Operations on Digital Synthetic Routes by Pasquini, Marta, Stenta, Marco

“… In this application note, we demonstrate the capabilities of the open-source Python toolkit LinChemIn, which simplifies the manipulation of reaction networks and provides advanced functionality…”
Get more information

Application of individualized differential expression analysis in human cancer proteome by Liu, Yachen, Lin, Yalan, Yang, Wenxian, Lin, Yuxiang, Wu, Yujuan, Zhang, Zheyang, Lin, Nuoqi, Wang, Xianlong, Tong, Mengsha, Yu, Rongshan

“…Abstract Liquid chromatography–mass spectrometry-based quantitative proteomics can measure the expression of thousands of proteins from biological samples and…”
Get full text

Needles in the blue sea: Sub-species specificity in targeted protein biomarker analyses within the vast oceanic microbial metaproteome by Saito, Mak A., Dorsk, Alexander, Post, Anton F., McIlvin, Matthew R., Rappé, Michael S., DiTullio, Giacomo R., Moran, Dawn M.

“… Using METATRYP, an open‐source Python toolkit, we examined the number of shared (redundant) tryptic peptides in representative marine microbes, with the number of tryptic peptides shared between different species typically being 1…”
Get full text

Multipole expansion for H i intensity mapping experiments: simulations and modelling by Cunnington, Steven, Pourtsidou, Alkistis, Soares, Paula S, Blake, Chris, Bacon, David

“…ABSTRACT We present a framework and an open-source python toolkit to analyse the two-point statistics of 3D fluctuations in the context of H…”
Get full text

RatInABox, a toolkit for modelling locomotion and neuronal activity in continuous environments by George, Tom M, Rastogi, Mehul, de Cothi, William, Clopath, Claudia, Stachenfeld, Kimberly, Barry, Caswell

“… In response, we present RatInABox, an open-source Python toolkit designed to model realistic rodent locomotion and generate synthetic neural data from spatially modulated cell types…”
Get full text