Search Results - "shared-memory programming"

Modularity‐based parallel protein design algorithm with an implementation using shared memory programming by Pal, Abantika, Mulumudy, Rohith, Mitra, Pralay

“…Given a target protein structure, the prime objective of protein design is to find amino acid sequences that will fold/acquire to the given three‐dimensional…”
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Evaluating performance portability of five shared-memory programming models using a high-order unstructured CFD solver by Dai, Zhe, Deng, Liang, Che, YongGang, Li, Ming, Zhang, Jian, Wang, Yueqing

“…) solver using five shared-memory programming models: CUDA, OpenACC, OpenMP, Kokkos, and OP2…”
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Development of the FMO/RI-MP2 Fully Analytic Gradient Using a Hybrid-Distributed/Shared Memory Programming Model by Pham, Buu Q, Gordon, Mark S

“…The fully analytic gradient of the second-order Møller-Plesset perturbation theory (MP2) with the resolution-of-the-identity (RI) approximation in the fragment…”
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The Unicorn Runtime: Efficient Distributed Shared Memory Programming for Hybrid CPU-GPU Clusters by Beri, Tarun, Bansal, Sorav, Kumar, Subodh

“…Programming hybrid CPU-GPU clusters is hard. This paper addresses this difficulty and presents the design and runtime implementation of Unicorn-a parallel…”
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TELEPORT: Hardware/software alternative to CUDA shared memory programming by Lashgar, Ahmad, Atoofian, Ehsan, Baniasadi, Amirali

“…Using software-managed cache in CUDA programming provides significant potential to improve memory efficiency. Employing this feature requires the programmer to…”
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DaSH: A benchmark suite for hybrid dataflow and shared memory programming models by Gajinov, Vladimir, Stipić, Srdjan, Erić, Igor, Unsal, Osman S., Ayguadé, Eduard, Cristal, Adrian

“…•Three important properties of DaSH are breadth, depth and portability.•The main strength of dataflow is the ability to eliminate unnecessary…”
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Parallel evolutionary algorithms based on shared memory programming approaches by Redondo, J. L., García, I., Ortigosa, P. M.

“…In this work, two parallel techniques based on shared memory programming are presented…”
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A Case Study of Hybrid Dataflow and Shared-Memory Programming Models: Dependency-Based Parallel Game Engine by Gajinov, Vladimir, Eric, Igor, Stojanovic, Saa, Milutinovic, Veljko, Unsal, Osman, Ayguade, Eduard, Cristal, Adrian

“…Recently proposed hybrid dataflow and shared memory programming models combine these two underlying models in order to support a wider range of problems naturally…”
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Solving the multi-objective flexible job shop scheduling problem with a novel parallel branch and bound algorithm by Soto, Carlos, Dorronsoro, Bernabé, Fraire, Héctor, Cruz-Reyes, Laura, Gomez-Santillan, Claudia, Rangel, Nelson

“…This work presents a novel parallel branch and bound algorithm to efficiently solve to optimality a set of instances of the multi-objective flexible job shop…”
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Programming parallel dense matrix factorizations and inversion for new-generation NUMA architectures by Catalán, Sandra, Igual, Francisco D., Herrero, José R., Rodríguez-Sánchez, Rafael, Quintana-Ortí, Enrique S.

“…We propose a methodology to address the programmability issues derived from the emergence of new-generation shared-memory NUMA architectures. For this purpose,…”
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Fast decision tree-based method to index large DNA-protein sequence databases using hybrid distributed-shared memory programming model by Jaber, Khalid Mohammad, Abdullah, Rosni, Rashid, Nur'Aini Abdul

“…In recent times, the size of biological databases has increased significantly, with the continuous growth in the number of users and rate of queries; such that…”
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Architectural Adaptation and Performance-Energy Optimization for CFD Application on AMD EPYC Rome by Szustak, Lukasz, Wyrzykowski, Roman, Kuczynski, Lukasz, Olas, Tomasz

“…The advantages of the second-generation AMD EPYC Rome processors can be successfully used in the race to Exascale. However, the novel architecture's complexity…”
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Chapter 8 - Shared-memory programming: OpenMP by Gerassimos Barlas

“…The decomposition of a sequential program into components that can execute in parallel is a tedious enterprise. OpenMP has been designed to alleviate much of…”
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CXL Shared Memory Programming: Barely Distributed and Almost Persistent by Xu, Yi, Mahar, Suyash, Liu, Ziheng, Shen, Mingyao, Swanson, Steven

“…While Compute Express Link (CXL) enables support for cache-coherent shared memory among multiple nodes, it also introduces new types of failures--processes can…”
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A Shared Memory SMC Sampler for Decision Trees by Drousiotis, Efthyvoulos, Varsi, Alessandro, Spirakis, Paul G., Maskell, Simon

“…Modern classification problems tackled by using Decision Tree (DT) models often require demanding constraints in terms of accuracy and scalability. This is…”
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Parallelization of Array Method with Hybrid Programming: OpenMP and MPI by Velarde Martínez, Apolinar

“…) systems, shared memory programming and distributed memory programming have been used; a parallel application is represented by Parallel Task Graphs (PTGs…”
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Ribbons: A partially shared memory programming model by Hoffman, Kevin J

“… Ribbons is a shared memory programming model that allows for more implicit sharing of memory than multiprocessing yet is more restrictive than multithreading…”
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OpenMP: an industry standard API for shared-memory programming by Dagum, L., Menon, R.

“…At its most elemental level, OpenMP is a set of compiler directives and callable runtime library routines that extend Fortran (and separately, C and C++ to…”
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The Heat Equation: High-Performance Scientific Computing Case Study by Schuster, Micah D.

“… The author introduces the concept of shared memory programming in the context of solving the heat equation, which will allow the exploration of several finite difference…”
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Virtual Shared Memory Programming on Xeon Phi

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