Search Results - "python programming"

Array programming with NumPy by Harris, Charles R., Millman, K. Jarrod, van der Walt, Stéfan J., Gommers, Ralf, Virtanen, Pauli, Cournapeau, David, Wieser, Eric, Taylor, Julian, Berg, Sebastian, Smith, Nathaniel J., Kern, Robert, Picus, Matti, Hoyer, Stephan, van Kerkwijk, Marten H., Brett, Matthew, Haldane, Allan, del Río, Jaime Fernández, Wiebe, Mark, Peterson, Pearu, Gérard-Marchant, Pierre, Sheppard, Kevin, Reddy, Tyler, Weckesser, Warren, Abbasi, Hameer, Gohlke, Christoph, Oliphant, Travis E.

“…Array programming provides a powerful, compact and expressive syntax for accessing, manipulating and operating on data in vectors, matrices and…”
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MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads by Uliano-Silva, Marcela, Ferreira, João Gabriel R. N., Krasheninnikova, Ksenia, Formenti, Giulio, Abueg, Linelle, Torrance, James, Myers, Eugene W., Durbin, Richard, Blaxter, Mark, McCarthy, Shane A.

“…Background  PacBio high fidelity (HiFi) sequencing reads are both long (15–20 kb) and highly accurate (> Q20). Because of these properties, they have…”
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PF[DELTA]Screen - an open-source tool for automated PFAS feature prioritization in non-target HRMS data by Zweigle, Jonathan, Bugsel, Boris, Fabregat-Palau, Joel, Zwiener, Christian

“…Per- and polyfluoroalkyl substances (PFAS) are a huge group of anthropogenic chemicals with unique properties that are used in countless products and…”
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MDAnalysis: A toolkit for the analysis of molecular dynamics simulations by Michaud-Agrawal, Naveen, Denning, Elizabeth J., Woolf, Thomas B., Beckstein, Oliver

“…MDAnalysis is an object‐oriented library for structural and temporal analysis of molecular dynamics (MD) simulation trajectories and individual protein…”
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Thermal analysis of Non-Newtonian visco-inelastic fluid MHD flow between rotating disks by Jalili, Bahram, Ganji, Ali Mirzagoli, Shateri, Amirali, Jalili, Payam, Domiri Ganji, Davood

“…Analytical techniques are used in this article to examine the forced flow and heat transfer in a non-Newtonian Reiner-Rivlin fluid between two infinitely…”
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The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks by Naldi, Aurélien, Hernandez, Céline, Levy, Nicolas, Stoll, Gautier, Monteiro, Pedro T., Chaouiya, Claudine, Helikar, Tomáš, Zinovyev, Andrei, Calzone, Laurence, Cohen-Boulakia, Sarah, Thieffry, Denis, Paulevé, Loïc

“…Analysing models of biological networks typically relies on workflows in which different software tools with sensitive parameters are chained together, many…”
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Cultivating Thinking Skills and Computational Thinking in Higher Education: A Case-based Decision-Support Model from Taiwan by Chang, Shih-Jui, Lin, Chin-Tsai, Chen, Yung-Hui

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Cooltools: Enabling high-resolution Hi-C analysis in Python by Abdennur, Nezar, Abraham, Sameer, Fudenberg, Geoffrey, Flyamer, Ilya M., Galitsyna, Aleksandra A., Goloborodko, Anton, Imakaev, Maxim, Oksuz, Betul A., Venev, Sergey V., Xiao, Yao

“…Chromosome conformation capture (3C) technologies reveal the incredible complexity of genome organization. Maps of increasing size, depth, and resolution are…”
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SymPy: symbolic computing in Python by Meurer, Aaron, Smith, Christopher P., Paprocki, Mateusz, Čertík, Ondřej, Kirpichev, Sergey B., Rocklin, Matthew, Kumar, AMiT, Ivanov, Sergiu, Moore, Jason K., Singh, Sartaj, Rathnayake, Thilina, Vig, Sean, Granger, Brian E., Muller, Richard P., Bonazzi, Francesco, Gupta, Harsh, Vats, Shivam, Johansson, Fredrik, Pedregosa, Fabian, Curry, Matthew J., Terrel, Andy R., Roučka, Štěpán, Saboo, Ashutosh, Fernando, Isuru, Kulal, Sumith, Cimrman, Robert, Scopatz, Anthony

“…SymPy is an open source computer algebra system written in pure Python. It is built with a focus on extensibility and ease of use, through both interactive and…”
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Basic Uses of Python for Research in Our Laboratory: Examples of Data Analysis, and Processing of Histological Samples Based on the Special Graduate Lecture for Postgraduate Students Presented on January 2025 by JUAN ALEJANDRO OLIVA TREJO

“…Python is one of the most popular programming languages to learn and use. It is ubiquitous in fields like data analysis, artificial intelligence, image…”
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PyPSA: Python for Power System Analysis by Brown, Thomas, Hörsch, Jonas, Schlachtberger, David

“…Python for Power System Analysis (PyPSA) is a free software toolbox for simulating and optimising modern electrical power systems over multiple periods. PyPSA…”
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SDMtoolbox 2.0: the next generation Python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses by Brown, Jason L., Bennett, Joseph R., French, Connor M.

“…SDMtoolbox 2.0 is a software package for spatial studies of ecology, evolution, and genetics. The release of SDMtoolbox 2.0 allows researchers to use the most…”
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Developing an AI Model That Relies on Mobile Health Devices to Track Heart Activity by Hamdan H. Shehab, Fadi Al-Turjman

“…Heart disease lies among the top causes of death worldwide and accounts for a large number of deaths annually. Researchers are using artificial intelligence as…”
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Comparison between fuzzy logic and water quality index methods: A case of water quality assessment in Ikare community, Southwestern Nigeria by Oladipo, Johnson O., Akinwumiju, Akinola S., Aboyeji, O.S., Adelodun, Adedeji A.

“…•Water quality index (WQI) and fuzzy logic inference (FLI) assessed water quality.•FLI is more efficient, accurate, and affordable than WQI.•Waters in Ikare…”
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A sustainable approach to evaluating groundwater contamination in the Jharsuguda district, Odisha, India, using a multivariate statistical approach, modelling, and viable remedial measures by Barik, Pritisha, Biswal, Trinath

“…This study was carried out by collecting groundwater samples from various important locations in the Jharsuguda district, Odisha, India. From physicochemical…”
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Automated microstructural segmentation and grain size measurement of Al + SiC nanocomposites using advanced image processing techniques on backscattered electron images by Harikrishna, Katika, Nithin, Abeyram, Davidson, M.J.

“…Grain size analysis is crucial for understanding material properties, yet traditional manual methods are often time-consuming and labor-intensive. This study…”
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Algorithm for Constructing Total Graph of Commutative Ring by Meinawati, Rima, Kurniawan, Vika Yugi, Kurdhi, Nughthoh Arfawi

“…Let R be a commutative ring. The total graph of R, denoted by TΓ(R) is a graph whose vertices are all elements of the ring R and every i,j∈R with i≠j, then i…”
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Beginning Python 3 with Claude 3 by Campesato, Oswald

“…This book is a comprehensive guide designed to teach the fundamentals of Python programming while introducing the exciting possibilities of Generative AI…”
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Pysteps: an open-source Python library for probabilistic precipitation nowcasting (v1.0) by Pulkkinen, Seppo, Nerini, Daniele, Pérez Hortal, Andrés A., Velasco-Forero, Carlos, Seed, Alan, Germann, Urs, Foresti, Loris

“…Pysteps is an open-source and community-driven Python library for probabilistic precipitation nowcasting, that is, very-short-range forecasting (0–6 h). The…”
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BindsNET: A Machine Learning-Oriented Spiking Neural Networks Library in Python by Hazan, Hananel, Saunders, Daniel J., Khan, Hassaan, Patel, Devdhar, Sanghavi, Darpan T., Siegelmann, Hava T., Kozma, Robert

“…The development of spiking neural network simulation software is a critical component enabling the modeling of neural systems and the development of…”
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