Search Results - "Python Software Package"

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  1. 1

    Modelling rainfall with a Bartlett–Lewis process: pyBL (v1.0.0), a Python software package and an application with short records by Wei, Chi-Ling, Chen, Pei-Chun, Tseng, Chien-Yu, Dai, Ting-Yu, Ho, Yun-Ting, Chou, Ching-Chun, Onof, Christian, Wang, Li-Pen

    ISSN: 1991-9603, 1991-959X, 1991-962X, 1991-9603, 1991-962X
    Published: Katlenburg-Lindau Copernicus GmbH 05.03.2025
    Published in Geoscientific Model Development (05.03.2025)
    “…The Bartlett–Lewis (BL) model is a stochastic framework for representing rainfall based upon Poisson cluster point process theory. This model has been used for…”
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    Journal Article
  2. 2

    DynamiSpectra: A Python Software Package and Web Platform for Molecular Dynamics Data Analysis in Computational Biology by Bezerra, Iverson Conrado, de Oliveira Viana, Jéssika, Weber, Karen Cacilda, Gubert, Priscila

    ISSN: 1549-960X
    Published: United States 08.09.2025
    “…Molecular dynamics (MD) simulations generate extensive data sets that demand reliable and reproducible analysis tools. In this study, we present DynamiSpectra,…”
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    Journal Article
  3. 3

    Constraint Network Analysis (CNA): a Python software package for efficiently linking biomacromolecular structure, flexibility, (thermo-)stability, and function by Pfleger, Christopher, Rathi, Prakash Chandra, Klein, Doris L, Radestock, Sebastian, Gohlke, Holger

    ISSN: 1549-960X
    Published: United States 22.04.2013
    “…For deriving maximal advantage from information on biomacromolecular flexibility and rigidity, results from rigidity analyses must be linked to biologically…”
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    Journal Article
  4. 4

    RockDisc-Gen: A python software package for rock discontinuity generation by Su, Yujie, Gao, Hong, Meng, Han, Wang, Jinming, Mei, Gang

    ISSN: 2352-7110, 2352-7110
    Published: Elsevier B.V 01.12.2025
    Published in SoftwareX (01.12.2025)
    “… Here, we developed a Python software package, RockDisc-Gen, for ease-of-use rock discontinuities generation and visualization…”
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    Journal Article
  5. 5

    pyFIRI — A free and open source Python software package of the non-auroral Earth’s lower ionosphere by Zolotov, Oleg, Romanovskaya, Yulia, Knyazeva, Maria

    ISSN: 2352-7110, 2352-7110
    Published: Elsevier B.V 01.12.2021
    Published in SoftwareX (01.12.2021)
    “…pyFIRI is a free and open source Python3 implementation of FIRI-2018, a model of the Earth’s ionospheric D-region. This region is one of the hardest to observe…”
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    Journal Article
  6. 6

    NLMpy: a python software package for the creation of neutral landscape models within a general numerical framework by Etherington, Thomas R., Holland, E. Penelope, O'Sullivan, David, Poisot, Timothée

    ISSN: 2041-210X, 2041-210X
    Published: London John Wiley & Sons, Inc 01.02.2015
    Published in Methods in ecology and evolution (01.02.2015)
    “…Summary Neutral landscape models (NLMs) are widely used to model ecological patterns and processes across landscapes. However, the ability to generate NLMs is…”
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    Journal Article
  7. 7
  8. 8

    Version 2.0 - pyFIRI — A free and open source Python software package of the non-auroral Earth’s lower ionosphere by Zolotov, Oleg, Romanovskaya, Yulia, Knyazeva, Maria

    ISSN: 2352-7110, 2352-7110
    Published: Elsevier B.V 01.12.2022
    Published in SoftwareX (01.12.2022)
    “…This paper presents the extrapolated version of FIRI-2018, a mature empirical model of the Earth’s ionosphere D-region (∼60–90 km). The original FIRI-2018…”
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    Journal Article
  9. 9

    NLM py: a python software package for the creation of neutral landscape models within a general numerical framework by Etherington, Thomas R., Holland, E. Penelope, O'Sullivan, David

    ISSN: 2041-210X, 2041-210X
    Published: 01.02.2015
    Published in Methods in ecology and evolution (01.02.2015)
    “…Neutral landscape models ( NLM s) are widely used to model ecological patterns and processes across landscapes. However, the ability to generate NLMs is often…”
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    Journal Article
  10. 10

    PyThea: An open-source software package to perform 3D reconstruction of coronal mass ejections and shock waves by Kouloumvakos, Athanasios, Rodríguez-García, Laura, Gieseler, Jan, Price, Daniel J., Vourlidas, Angelos, Vainio, Rami

    ISSN: 2296-987X, 2296-987X
    Published: Frontiers Media S.A 06.09.2022
    Published in Frontiers in astronomy and space sciences (06.09.2022)
    “…PyThea is a newly developed open-source Python software package that provides tools to reconstruct coronal mass ejections (CMEs…”
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    Journal Article
  11. 11

    Python Software Package for Automatic Generation and Verification of BPA Simulation Data Aimed at Load Flow Analysis by Zhang, Jifan, Zhang, Hengxu, Shi, Xiaohan, Liu, Chunyang

    Published: IEEE 21.09.2023
    “…With the expansion of the power grid scale and the development of the smart grid, a substantial number of new infrastructure projects are added to the grid…”
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    Conference Proceeding
  12. 12

    Development of a power flow software for distribution system analysis based on rectangular voltage using python software package by Hakim, Lukmanul, Wahidi, Muhamad, Handoko, Trisno, Gusmedi, Herri, Soedjarwanto, Noer, Milano, Federico

    ISBN: 9781479953028, 1479953024
    Published: IEEE 01.10.2014
    “…This paper presents our work on developing a power flow software tool based on rectangular voltage coordinates using the Python scripting language. Rectangular…”
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    Conference Proceeding
  13. 13

    PyPhi: A toolbox for integrated information theory by Mayner, William G. P., Marshall, William, Albantakis, Larissa, Findlay, Graham, Marchman, Robert, Tononi, Giulio

    ISSN: 1553-7358, 1553-734X, 1553-7358
    Published: United States Public Library of Science 26.07.2018
    Published in PLoS computational biology (26.07.2018)
    “… Here, we introduce PyPhi, a Python software package that implements this framework for causal analysis and unfolds the full cause-effect structure of discrete dynamical systems of binary elements…”
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    Journal Article
  14. 14

    CirGO: an alternative circular way of visualising gene ontology terms by Kuznetsova, Irina, Lugmayr, Artur, Siira, Stefan J., Rackham, Oliver, Filipovska, Aleksandra

    ISSN: 1471-2105, 1471-2105
    Published: London BioMed Central 18.02.2019
    Published in BMC bioinformatics (18.02.2019)
    “…Background Prioritisation of gene ontology terms from differential gene expression analyses in a two-dimensional format remains a challenge with exponentially…”
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    Journal Article
  15. 15

    An analytic computation-driven algorithm for Decentralized Multicore Systems by Lin, Yezhi, Jin, Xinyuan, Chen, Jiuqiang, Sodhro, Ali Hassan, Pan, Zhifang

    ISSN: 0167-739X, 1872-7115, 1872-7115
    Published: Elsevier B.V 01.07.2019
    Published in Future generation computer systems (01.07.2019)
    “…–Rach double decomposition method and Rach’s Adomian polynomials. Based on our algorithm, we further developed a user-friendly Python software package to construct analytic approximations of initial or boundary…”
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    Journal Article
  16. 16

    PyGellermann: a Python tool to generate pseudorandom series for human and non-human animal behavioural experiments by Jadoul, Yannick, Duengen, Diandra, Ravignani, Andrea

    ISSN: 1756-0500, 1756-0500
    Published: London BioMed Central 05.07.2023
    Published in BMC research notes (05.07.2023)
    “… Results We present and distribute a simple Python software package and tool to produce pseudorandom sequences following the Gellermann…”
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    Journal Article
  17. 17

    rcsb-api: Python Toolkit for Streamlining Access to RCSB Protein Data Bank APIs by Piehl, Dennis W., Vallat, Brinda, Truong, Ivana, Morsy, Habiba, Bhatt, Rusham, Blaumann, Santiago, Biswas, Pratyoy, Rose, Yana, Bittrich, Sebastian, Duarte, Jose M., Segura, Joan, Bi, Chunxiao, Myers-Turnbull, Douglas, Hudson, Brian P., Zardecki, Christine, Burley, Stephen K.

    ISSN: 0022-2836, 1089-8638, 1089-8638
    Published: Netherlands Elsevier Ltd 01.08.2025
    Published in Journal of molecular biology (01.08.2025)
    “…[Display omitted] •The rcsb-api Python software package can be used for accessing…”
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    Journal Article
  18. 18

    TomoPyUI: a user‐friendly tool for rapid tomography alignment and reconstruction by Welborn, Samuel S., Preefer, Molleigh B., Nelson Weker, Johanna

    ISSN: 1600-5775, 0909-0495, 1600-5775
    Published: 5 Abbey Square, Chester, Cheshire CH1 2HU, England International Union of Crystallography 01.07.2024
    Published in Journal of synchrotron radiation (01.07.2024)
    “… This highly visual Python software package guides the user through the tomography processing pipeline from data import, preprocessing, alignment and finally to 3D volume reconstruction…”
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    Journal Article
  19. 19

    PyCrystalField: software for calculation, analysis and fitting of crystal electric field Hamiltonians by Scheie, A.

    ISSN: 1600-5767, 0021-8898, 1600-5767
    Published: 5 Abbey Square, Chester, Cheshire CH1 2HU, England International Union of Crystallography 01.02.2021
    Published in Journal of applied crystallography (01.02.2021)
    “…PyCrystalField is a Python software package for calculating single‐ion crystal electric field (CEF) Hamiltonians…”
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    Journal Article
  20. 20

    A deep learning approach: physics-informed neural networks for solving a nonlinear telegraph equation with different boundary conditions by Deresse, Alemayehu Tamirie, Bekela, Alemu Senbeta

    ISSN: 1756-0500, 1756-0500
    Published: England BioMed Central Ltd 19.02.2025
    Published in BMC research notes (19.02.2025)
    “…The nonlinear Telegraph equation appears in a variety of engineering and science problems. This paper presents a deep learning algorithm termed…”
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    Journal Article