Search Results - "Nucleotide sequence"

Twenty years of plant genome sequencing: achievements and challenges by Sun, Yanqing, Shang, Lianguang, Zhu, Qian-Hao, Fan, Longjiang, Guo, Longbiao

“…Publication of the complete genome sequence of Arabidopsis thaliana, the first plant reference genome, in December 2000 heralded the beginning of the plant…”
Get full text

Weighted parsimony outperforms other methods of phylogenetic inference under models appropriate for morphology by Goloboff, Pablo A., Torres, Ambrosio, Arias, J. Salvador

“…One of the lasting controversies in phylogenetic inference is the degree to which specific evolutionary models should influence the choice of methods…”
Get full text

Uracil-Mediated New Photospacer-Adjacent Motif of Cas12a To Realize Visualized DNA Detection at the Single-Copy Level Free from Contamination by Qian, Cheng, Wang, Rui, Wu, Hui, Zhang, Fang, Wu, Jian, Wang, Liu

“…The CRISPR/Cas12a (cpf1) system was reported to indiscriminately cleave single-stranded DNA after binding with target DNA strands. This usually required the…”
Get more information

Absence of Coronavirus in terns in the Western Indian Ocean? by Lebarbenchon, Camille, Feare, Chris, Larose, Christine, Simbi, Marie-Alice, Boucher, Solenn, Jaeger, Audrey, Corre, Matthieu Le

“…We investigated coronavirus circulation in three tern species on four islands of the Western Indian Ocean (Bird, Reunion, Europa, Juan de Nova). None of the…”
Get full text

Self-Replicating Catalyzed Hairpin Assembly for Rapid Signal Amplification by Dai, Jianyuan, He, Hongfei, Duan, Zhijuan, Guo, Yong, Xiao, Dan

“…A rapid signal amplification system based on the self-replicating catalyzed hairpin assembly is reported in which two hairpins, H1 and H2, were well-designed…”
Get more information

The complete sequence of a human genome by Nurk, Sergey, Koren, Sergey, Rhie, Arang, Rautiainen, Mikko, Bzikadze, Andrey V, Mikheenko, Alla, Vollger, Mitchell R, Altemose, Nicolas, Uralsky, Lev, Gershman, Ariel, Aganezov, Sergey, Hoyt, Savannah J, Diekhans, Mark, Logsdon, Glennis A, Alonge, Michael, Antonarakis, Stylianos E, Borchers, Matthew, Bouffard, Gerard G, Brooks, Shelise Y, Caldas, Gina V, Chen, Nae-Chyun, Cheng, Haoyu, Chin, Chen-Shan, Chow, William, de Lima, Leonardo G, Dishuck, Philip C, Durbin, Richard, Dvorkina, Tatiana, Fiddes, Ian T, Formenti, Giulio, Fulton, Robert S, Fungtammasan, Arkarachai, Garrison, Erik, Grady, Patrick G S, Graves-Lindsay, Tina A, Hall, Ira M, Hansen, Nancy F, Hartley, Gabrielle A, Haukness, Marina, Howe, Kerstin, Hunkapiller, Michael W, Jain, Chirag, Jain, Miten, Jarvis, Erich D, Kerpedjiev, Peter, Kirsche, Melanie, Kolmogorov, Mikhail, Korlach, Jonas, Kremitzki, Milinn, Li, Heng, Maduro, Valerie V, Marschall, Tobias, McCartney, Ann M, McDaniel, Jennifer, Miller, Danny E, Mullikin, James C, Myers, Eugene W, Olson, Nathan D, Paten, Benedict, Peluso, Paul, Pevzner, Pavel A, Porubsky, David, Potapova, Tamara, Rogaev, Evgeny I, Rosenfeld, Jeffrey A, Salzberg, Steven L, Schneider, Valerie A, Sedlazeck, Fritz J, Shafin, Kishwar, Shew, Colin J, Shumate, Alaina, Sims, Ying, Smit, Arian F A, Soto, Daniela C, Sović, Ivan, Storer, Jessica M, Streets, Aaron, Sullivan, Beth A, Thibaud-Nissen, Françoise, Torrance, James, Wagner, Justin, Walenz, Brian P, Wenger, Aaron, Wood, Jonathan M D, Xiao, Chunlin, Yan, Stephanie M, Young, Alice C, Zarate, Samantha, Surti, Urvashi, McCoy, Rajiv C, Dennis, Megan Y, Alexandrov, Ivan A, Gerton, Jennifer L, O'Neill, Rachel J, Timp, Winston, Zook, Justin M, Schatz, Michael C, Eichler, Evan E, Miga, Karen H, Phillippy, Adam M

“…Since its initial release in 2000, the human reference genome has covered only the euchromatic fraction of the genome, leaving important heterochromatic…”
Get more information

An Enzyme-Free DNA Circuit-Assisted Graphene Oxide Enhanced Fluorescence Anisotropy Assay for MicroRNA Detection with Improved Sensitivity and Selectivity by Zhen, Shu Jun, Xiao, Xue, Li, Chun Hong, Huang, Cheng Zhi

“…Graphene oxide (GO) has been proven as an outstanding fluorescence anisotropy (FA) amplifier. Yet the traditional GO amplified FA assays lack high sensitivity…”
Get more information

Integrated Metabolomic-Genomic Workflows Accelerate Microbial Natural Product Discovery by Avalon, Nicole E, Murray, Alison E, Baker, Bill J

“…The pairing of analytical chemistry with genomic techniques represents a new wave in natural product chemistry. With an increase in the availability of…”
Get more information

Spatial and temporal characterization of the rich fraction of plastid DNA present in the nuclear genome of Moringa oleifera reveals unanticipated complexity in NUPTs´ formation by Marczuk-Rojas, Juan Pablo, Ãlamo-Sierra, Angélica María, Salmerón, Antonio, Alcayde, Alfredo, Isanbaev, Viktor, Carretero-Paulet, Lorenzo

“…Beyond the massive amounts of DNA and genes transferred from the protoorganelle genome to the nucleus during the endosymbiotic event that gave rise to the…”
Get full text

Pooling designs and nonadaptive group testing: important tools for DNA sequencing. by Du, Dingzhu, Du, Dingzhu, Hwang, Frank K

“…Pooling designs have been widely used in various aspects of DNA sequencing. In biological applications, the well-studied mathematical problem called “group…”
Get full text

Computational methods for next generation sequencing data analysis by Măndoiu, Ion, Zelikovsky, Alexander

“…Introduces readers to core algorithmic techniques for next-generation sequencing (NGS) data analysis and discusses a wide range of computational techniques and…”
Get full text

Roadmap for Accelerated Domestication of an Emerging Perennial Grain Crop by DeHaan, Lee, Larson, Steve, López-Marqués, Rosa L., Wenkel, Stephan, Gao, Caixia, Palmgren, Michael

“…Shifting the life cycle of grain crops from annual to perennial would usher in a new era of agriculture that is more environmentally friendly, resilient to…”
Get full text

A global plastid phylogeny of the fern genus Asplenium (Aspleniaceae) by Xu, Ke‐Wang, Zhang, Liang, Rothfels, Carl J., Smith, Alan R., Viane, Ronald, Lorence, David, Wood, Kenneth R., Chen, Cheng‐Wei, Knapp, Ralf, Zhou, Lin, Lu, Ngan Thi, Zhou, Xin‐Mao, Wei, Hong‐Jin, Fan, Qiang, Chen, Su‐Fang, Cicuzza, Daniele, Gao, Xin‐Fen, Liao, Wen‐Bo, Zhang, Li‐Bing

“…The infrageneric relationships and taxonomy of the largest fern genus, Asplenium (Aspleniaceae), have remained poorly understood. Previous studies have focused…”
Get full text

The Need for a Human Pangenome Reference Sequence by Miga, Karen H, Wang, Ting

“…The reference human genome sequence is inarguably the most important and widely used resource in the fields of human genetics and genomics. It has transformed…”
Get more information

On the phylogenetic relationships and taxonomic status of the single-striped opossum Monodelphis unistriata (Didelphimorphia, Didelphidae) (American Museum novitates, no. 4040) by Giarla, Thomas C., Voss, Robert S., Teta, Pablo, Pavan, Silvia E.

“…Analyses of mitochondrial sequence data painstakingly obtained from a century-old specimen of the elusive single-striped opossum Monodelphis unistriata…”
Get full text

Spatial phylogenetics by Mishler, Brent D.

“…The metric called phylogenetic diversity (PD) has been employed over the last 30 years to add an evolutionary dimension to the exploration of biodiversity…”
Get full text

The Increasing Disconnection of Primary Biodiversity Data from Specimens: How Does It Happen and How to Handle It? by Troudet, Julien, Vignes-Lebbe, Régine, Grandcolas, Philippe, Legendre, Frédéric

“…Primary biodiversity data represent the fundamental elements of any study in systematics and evolution. They are, however, no longer gathered as they used to…”
Get more information

Ancient DNA indicates human population shifts and admixture in northern and southern China by Yang, Melinda A, Fan, Xuechun, Sun, Bo, Chen, Chungyu, Lang, Jianfeng, Ko, Ying-Chin, Tsang, Cheng-Hwa, Chiu, Hunglin, Wang, Tianyi, Bao, Qingchuan, Wu, Xiaohong, Hajdinjak, Mateja, Ko, Albert Min-Shan, Ding, Manyu, Cao, Peng, Yang, Ruowei, Liu, Feng, Nickel, Birgit, Dai, Qingyan, Feng, Xiaotian, Zhang, Lizhao, Sun, Chengkai, Ning, Chao, Zeng, Wen, Zhao, Yongsheng, Zhang, Ming, Gao, Xing, Cui, Yinqiu, Reich, David, Stoneking, Mark, Fu, Qiaomei

“…Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome wide data from 26 ancient individuals from…”
Get more information

Pioneer Transcription Factors Initiating Gene Network Changes by Zaret, Kenneth S

“…Pioneer transcription factors have the intrinsic biochemical ability to scan partial DNA sequence motifs that are exposed on the surface of a nucleosome and…”
Get more information

'EPIGENETIC' CELL RESET PAVES THE WAY FOR LABGROWN SPERM AND EGGS by Ledford, Heidi

“…Eggs in a dish "Epigenetic reprogramming is key to making the next generation," says Mitinori Saitou, a stem-cell biologist at Kyoto University in Japan, and a…”
Get full text