Suchergebnisse - "Muschelli, John"

Recommendations for Processing Head CT Data von Muschelli, John

“… Many research applications of neuroimaging use magnetic resonance imaging (MRI). As such, recommendations for image analysis and standardized imaging pipelines …”
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Interpreting blood GLUcose data with R package iglu von Broll, Steven, Urbanek, Jacek, Buchanan, David, Chun, Elizabeth, Muschelli, John, Punjabi, Naresh M., Gaynanova, Irina

“… Continuous Glucose Monitoring (CGM) data play an increasing role in clinical practice as they provide detailed quantification of blood glucose levels during …”
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ciftiTools: A package for reading, writing, visualizing, and manipulating CIFTI files in R von Pham, Damon D., Muschelli, John, Mejia, Amanda F.

“… •The ciftiTools R package is a user-friendly interface for CIFTI and GIFTI files.•It supports reading, writing, visualization, math and manipulation.•The plots …”
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Reduction of motion-related artifacts in resting state fMRI using aCompCor von Muschelli, John, Nebel, Mary Beth, Caffo, Brian S., Barber, Anita D., Pekar, James J., Mostofsky, Stewart H.

“… Recent studies have illustrated that motion-related artifacts remain in resting-state fMRI (rs-fMRI) data even after common corrective processing procedures …”
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The ANTsX ecosystem for quantitative biological and medical imaging von Tustison, Nicholas J., Cook, Philip A., Holbrook, Andrew J., Johnson, Hans J., Muschelli, John, Devenyi, Gabriel A., Duda, Jeffrey T., Das, Sandhitsu R., Cullen, Nicholas C., Gillen, Daniel L., Yassa, Michael A., Stone, James R., Gee, James C., Avants, Brian B.

“… The Advanced Normalizations Tools ecosystem, known as ANTsX, consists of multiple open-source software libraries which house top-performing algorithms used …”
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Large-scale Radiomic Profiling of Recurrent Glioblastoma Identifies an Imaging Predictor for Stratifying Anti-Angiogenic Treatment Response von Kickingereder, Philipp, Götz, Michael, Muschelli, John, Wick, Antje, Neuberger, Ulf, Shinohara, Russell T, Sill, Martin, Nowosielski, Martha, Schlemmer, Heinz-Peter, Radbruch, Alexander, Wick, Wolfgang, Bendszus, Martin, Maier-Hein, Klaus H, Bonekamp, David

“… Antiangiogenic treatment with bevacizumab, a mAb to the VEGF, is the single most widely used therapeutic agent for patients with recurrent glioblastoma. A …”
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Diurnal Physical Activity Patterns across Ages in a Large UK Based Cohort: The UK Biobank Study von Wrobel, Julia, Muschelli, John, Leroux, Andrew

“… The ability of individuals to engage in physical activity is a critical component of overall health and quality of life. However, there is a natural decline in …”
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Moderated t-tests for group-level fMRI analysis von Wang, Guoqing, Muschelli, John, Lindquist, Martin A.

“… •We introduce a moderated t-statistic for performing group-level fMRI analysis.•The approach helps alleviate problems related to small sample sizes.•The …”
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Thrombolytic removal of intraventricular haemorrhage in treatment of severe stroke: results of the randomised, multicentre, multiregion, placebo-controlled CLEAR III trial von Hanley, Daniel F, Lane, Karen, McBee, Nichol, Ziai, Wendy, Tuhrim, Stanley, Lees, Kennedy R, Dawson, Jesse, Gandhi, Dheeraj, Ullman, Natalie, Mould, W Andrew, Mayo, Steven W, Mendelow, A David, Gregson, Barbara, Butcher, Kenneth, Vespa, Paul, Wright, David W, Kase, Carlos S, Carhuapoma, J Ricardo, Keyl, Penelope M, Diener-West, Marie, Muschelli, John, Betz, Joshua F, Thompson, Carol B, Sugar, Elizabeth A, Yenokyan, Gayane, Janis, Scott, John, Sayona, Harnof, Sagi, Lopez, George A, Aldrich, E Francois, Harrigan, Mark R, Ansari, Safdar, Jallo, Jack, Caron, Jean-Louis, LeDoux, David, Adeoye, Opeolu, Zuccarello, Mario, Adams, Harold P, Rosenblum, Michael, Thompson, Richard E, Awad, Issam A

“… Intraventricular haemorrhage is a subtype of intracerebral haemorrhage, with 50% mortality and serious disability for survivors. We aimed to test whether …”
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Safety and efficacy of minimally invasive surgery plus alteplase in intracerebral haemorrhage evacuation (MISTIE): a randomised, controlled, open-label, phase 2 trial von Hanley, Daniel F, Thompson, Richard E, Muschelli, John, Rosenblum, Michael, McBee, Nichol, Lane, Karen, Bistran-Hall, Amanda J, Mayo, Steven W, Keyl, Penelope, Gandhi, Dheeraj, Morgan, Tim C, Ullman, Natalie, Mould, W Andrew, Carhuapoma, J Ricardo, Kase, Carlos, Ziai, Wendy, Thompson, Carol B, Yenokyan, Gayane, Huang, Emily, Broaddus, William C, Graham, R Scott, Aldrich, E Francois, Dodd, Robert, Wijman, Cristanne, Caron, Jean-Louis, Huang, Judy, Camarata, Paul, Mendelow, A David, Gregson, Barbara, Janis, Scott, Vespa, Paul, Martin, Neil, Awad, Issam, Zuccarello, Mario

“… Craniotomy, according to the results from trials, does not improve functional outcome after intracerebral haemorrhage. Whether minimally invasive catheter …”
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A multi-scanner neuroimaging data harmonization using RAVEL and ComBat von Eshaghzadeh Torbati, Mahbaneh, Minhas, Davneet S., Ahmad, Ghasan, O’Connor, Erin E., Muschelli, John, Laymon, Charles M., Yang, Zixi, Cohen, Ann D., Aizenstein, Howard J., Klunk, William E., Christian, Bradley T., Hwang, Seong Jae, Crainiceanu, Ciprian M., Tudorascu, Dana L.

“… •RAVEL substantially improved the reproducibility of image intensities.•ComBat is preferred over RAVEL and the RAVEL-ComBat combination in terms of regional …”
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Removing inter-subject technical variability in magnetic resonance imaging studies von Fortin, Jean-Philippe, Sweeney, Elizabeth M., Muschelli, John, Crainiceanu, Ciprian M., Shinohara, Russell T.

“… Magnetic resonance imaging (MRI) intensities are acquired in arbitrary units, making scans non-comparable across sites and between subjects. Intensity …”
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Assessment of Renal Vein Flow Index by Transesophageal Echocardiography: Precision, Variability, and Association with Cardiac Index During Cardiac Surgery von Goeddel, Lee A., Hernandez, Marina, Koffman, Lily, Santino, Chelsey, Muschelli, John, Zhou, Xinkai, Waldron, Natalie, Parikh, Chirag R., Lester, Laeben, Abozaid, Ravie, Faraday, Nauder, Crainiceanu, Ciprian M., Brown, Charles

“… •Renal vein blood flow measurement was assessed with transesophageal echocardiography at 30-minute intervals during cardiac surgery by the renal vein flow …”
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Validated automatic brain extraction of head CT images von Muschelli, John, Ullman, Natalie L., Mould, W. Andrew, Vespa, Paul, Hanley, Daniel F., Crainiceanu, Ciprian M.

“… X-ray computed tomography (CT) imaging of the brain is commonly used in diagnostic settings. Although CT scans are primarily used in clinical practice, they …”
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Reproducibility and Temporal Structure in Weekly Resting-State fMRI over a Period of 3.5 Years von Choe, Ann S., Jones, Craig K., Joel, Suresh E., Muschelli, John, Belegu, Visar, Caffo, Brian S., Lindquist, Martin A., van Zijl, Peter C. M., Pekar, James J.

“… Resting-state functional MRI (rs-fMRI) permits study of the brain's functional networks without requiring participants to perform tasks. Robust changes in such …”
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Comparison of Accelerometry-Based Measures of Physical Activity: Retrospective Observational Data Analysis Study von Karas, Marta, Muschelli, John, Leroux, Andrew, Urbanek, Jacek K, Wanigatunga, Amal A, Bai, Jiawei, Crainiceanu, Ciprian M, Schrack, Jennifer A

“… Given the evolution of processing and analysis methods for accelerometry data over the past decade, it is important to understand how newer summary measures of …”
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Intranasal insulin for improving cognitive function in multiple sclerosis von Newsome, Scott D., Fitzgerald, Kathryn C., Hughes, Abbey, Beier, Meghan, Koshorek, Jacqueline, Wang, Yujie, Maldonado, Daniela Pimentel, Shoemaker, Thomas, Malik, Taimur, Bayu, Tarik, Ravenna, Pablo E., Avornu, Ama, Sotirchos, Elias S., Romba, Meghan, Muschelli, John, Brown, Todd T., Calabresi, Peter A., Mowry, Ellen M.

“… Cognitive impairment is common in people with multiple sclerosis (PwMS). There is an urgent need to identify/develop novel therapies that can help cognitive …”
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ROC and AUC with a Binary Predictor: a Potentially Misleading Metric von Muschelli, John

“… In analysis of binary outcomes, the receiver operator characteristic (ROC) curve is heavily used to show the performance of a model or algorithm. The ROC curve …”
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Rxnat: An Open-Source R Package for XNAT-Based Repositories von Gherman, Adrian, Muschelli, John, Caffo, Brian, Crainiceanu, Ciprian

“… The extensible neuroimaging archive toolkit (XNAT) is a common platform for storing and distributing neuroimaging data and is used by many key repositories of …”
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ModelArray: An R package for statistical analysis of fixel-wise data von Zhao, Chenying, Tapera, Tinashe M., Bagautdinova, Joëlle, Bourque, Josiane, Covitz, Sydney, Gur, Raquel E., Gur, Ruben C., Larsen, Bart, Mehta, Kahini, Meisler, Steven L., Murtha, Kristin, Muschelli, John, Roalf, David R., Sydnor, Valerie J., Valcarcel, Alessandra M., Shinohara, Russell T., Cieslak, Matthew, Satterthwaite, Theodore D.

“… •ModelArray is an R package for statistical analysis of fixel-wise data.•ModelArray supports linear and nonlinear modeling and is extensible to more …”
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