Suchergebnisse - "Markov clustering algorithm"
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Fast Markov Clustering Algorithm Based on Belief Dynamics
ISSN: 2168-2267, 2168-2275, 2168-2275Veröffentlicht: United States IEEE 01.06.2023Veröffentlicht in IEEE transactions on cybernetics (01.06.2023)“… To detect the cluster configuration accurately and efficiently, we propose a new Markov clustering algorithm based on the limit state of the belief dynamics model …”
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HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks
ISSN: 0305-1048, 1362-4962, 1362-4962Veröffentlicht: England Oxford University Press 06.04.2018Veröffentlicht in Nucleic acids research (06.04.2018)“… Abstract Biological networks capture structural or functional properties of relevant entities such as molecules, proteins or genes. Characteristic examples are …”
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A heterogeneous parallel implementation of the Markov clustering algorithm for large-scale biological networks on distributed CPU–GPU clusters
ISSN: 0920-8542, 1573-0484Veröffentlicht: New York Springer US 01.05.2022Veröffentlicht in The Journal of supercomputing (01.05.2022)“… Biological interaction databases accommodate information about interacted proteins or genes. Clustering on the networks formed by the interaction information …”
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Adaptive Markov Clustering Algorithm for Optimal Event Detection From Heterogeneous News Documents
ISSN: 2169-3536, 2169-3536Veröffentlicht: Piscataway IEEE 2024Veröffentlicht in IEEE access (2024)“… ) techniques based on wrapping the Markov Clustering Algorithm (MCL) with the Binary Bat Algorithm (BBA …”
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Retraction Note: Module overlapping structure detection in PPI using an improved link similarity-based Markov clustering algorithm
ISSN: 0941-0643, 1433-3058Veröffentlicht: London Springer London 01.08.2024Veröffentlicht in Neural computing & applications (01.08.2024)Volltext
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Module overlapping structure detection in PPI using an improved link similarity-based Markov clustering algorithm
ISSN: 0941-0643, 1433-3058Veröffentlicht: Heidelberg Springer Nature B.V 03.05.2019Veröffentlicht in Neural computing & applications (03.05.2019)“… with biological significance in PPI networks, we propose a Markov clustering algorithm based on link similarity (MLS). First of all, the weighted link similarity is calculated …”
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Unsupervised Wavelet-Feature Correlation Ratio Markov Clustering Algorithm for Remotely Sensed Images
ISSN: 2076-3417, 2076-3417Veröffentlicht: Basel MDPI AG 01.01.2024Veröffentlicht in Applied sciences (01.01.2024)“… The wavelet-feature correlation ratio Markov clustering algorithm (WFCRMCA) for remotely sensed data is proposed based on an accurate description of abrupt spectral features and an optimized Markov clustering in the wavelet feather space …”
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Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm
ISSN: 1471-2105, 1471-2105Veröffentlicht: London BioMed Central 10.07.2015Veröffentlicht in BMC bioinformatics (10.07.2015)“… Background Clustering protein sequences according to inferred homology is a fundamental step in the analysis of many large data sets. Since the publication of …”
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Operon Prediction Model Based on Markov Clustering Algorithm
ISSN: 1314-1902, 1314-2321Veröffentlicht: Sophia Bulgarska Akademiya na Naukite / Bulgarian Academy of Sciences 01.03.2019Veröffentlicht in Bioautomation (01.03.2019)“… In this paper, an operon prediction model based on Markov clustering algorithm is proposed. The model uses some generic attribute information of genomes and graph clustering algorithm instead of classifier to predict operon …”
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Erratum to: Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm
ISSN: 1471-2105, 1471-2105Veröffentlicht: London BioMed Central 28.08.2015Veröffentlicht in BMC bioinformatics (28.08.2015)Volltext
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A modified two-stage Markov clustering algorithm for large and sparse networks
ISSN: 0169-2607, 1872-7565, 1872-7565Veröffentlicht: Ireland Elsevier Ireland Ltd 01.10.2016Veröffentlicht in Computer methods and programs in biomedicine (01.10.2016)“… •A fast and memory efficient, two-stage Markov clustering algorithm is proposed.•The algorithm is designed for the analysis of large and sparse graphs …”
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RETRACTED ARTICLE: Module overlapping structure detection in PPI using an improved link similarity-based Markov clustering algorithm
ISSN: 0941-0643, 1433-3058Veröffentlicht: London Springer London 03.05.2019Veröffentlicht in Neural computing & applications (03.05.2019)“… with biological significance in PPI networks, we propose a Markov clustering algorithm based on link similarity (MLS). First of all, the weighted link similarity is calculated …”
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Protein Clustering in Formation of Falciparum Plasmodium using Soft Regularized-Markov Clustering Algorithm
ISSN: 2686-5335, 2716-2478Veröffentlicht: UIN Syarif Hidayatullah 31.12.2019Veröffentlicht in InPrime (31.12.2019)“… AbstractProtein has an important role in our life. Every protein interacts with other proteins, DNA, and other molecules. It forms a very large protein …”
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Efficient Markov clustering algorithm for protein sequence grouping
ISSN: 1094-687X, 1557-170X, 2694-0604, 2694-0604Veröffentlicht: United States IEEE 01.01.2013Veröffentlicht in 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) (01.01.2013)“… In this paper we propose an efficient reformulation of a Markov clustering algorithm, suitable for fast and accurate grouping of protein sequences, based on pairwise similarity information …”
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Evolutionary Markov Dynamics for Network Community Detection
ISSN: 1041-4347, 1558-2191Veröffentlicht: New York IEEE 01.03.2022Veröffentlicht in IEEE transactions on knowledge and data engineering (01.03.2022)“… Community structure division is a crucial problem in the field of network data analysis. Algorithms based on Markov chains are easy to use and provide …”
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Bag-of-word based brand recognition using Markov clustering algorithm for codebook generation
Veröffentlicht: IEEE 01.09.2015Veröffentlicht in 2015 IEEE International Conference on Image Processing (ICIP) (01.09.2015)“… In order to address the issue of counterfeiting online, it is necessary to use automatic tools that analyze the large amount of information available over the …”
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A soft computing approach for benign and malicious web robot detection
ISSN: 0957-4174, 1873-6793Veröffentlicht: New York Elsevier Ltd 30.11.2017Veröffentlicht in Expert systems with applications (30.11.2017)“… •We propose a method called SMART (Soft computing for MAlicious RoboT detection).•The method detects benign and malicious robots, and human visitors to a web …”
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Unsupervised Wavelet-Feature Markov Clustering Algorithm for Remotely Sensed Images
ISSN: 2641-5542Veröffentlicht: IEEE 09.12.2020Veröffentlicht in IEEE International Symposium on Signal Processing and Information Technology (09.12.2020)“… Wavelet-feature Markov clustering algorithm for the remotely sensed data is based on an accurate description of abrupt spectral features and an optimized Markov clustering in the wavelet feather space …”
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Network Community Detection Based on the Physarum-Inspired Computational Framework
ISSN: 1545-5963, 1557-9964Veröffentlicht: United States IEEE 01.11.2018Veröffentlicht in IEEE/ACM transactions on computational biology and bioinformatics (01.11.2018)“… Community detection is a crucial and essential problem in the structure analytics of complex networks, which can help us understand and predict the …”
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Implementation of regularized Markov clustering algorithm on protein interaction networks of schizophrenia's risk factor candidate genes
Veröffentlicht: IEEE 01.10.2016Veröffentlicht in ICACSIS 2016 : proceedings : 2016 International Conference on Advanced Computer Science and Information Systems : October 15-16th, 2016, Malang, East Java (01.10.2016)“… ). Therefore, it is necessary to study the PPI network of the candidate genes. Regularized Markov Clustering Algorithm (RMCL …”
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