Suchergebnisse - "Markov clustering algorithm"

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    Fast Markov Clustering Algorithm Based on Belief Dynamics von Li, Huijia, Xu, Wenzhe, Qiu, Chenyang, Pei, Jian

    ISSN: 2168-2267, 2168-2275, 2168-2275
    Veröffentlicht: United States IEEE 01.06.2023
    Veröffentlicht in IEEE transactions on cybernetics (01.06.2023)
    “… To detect the cluster configuration accurately and efficiently, we propose a new Markov clustering algorithm based on the limit state of the belief dynamics model …”
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    Journal Article
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    HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks von Azad, Ariful, Pavlopoulos, Georgios A, Ouzounis, Christos A, Kyrpides, Nikos C, Buluç, Aydin

    ISSN: 0305-1048, 1362-4962, 1362-4962
    Veröffentlicht: England Oxford University Press 06.04.2018
    Veröffentlicht in Nucleic acids research (06.04.2018)
    “… Abstract Biological networks capture structural or functional properties of relevant entities such as molecules, proteins or genes. Characteristic examples are …”
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    Journal Article
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    A heterogeneous parallel implementation of the Markov clustering algorithm for large-scale biological networks on distributed CPU–GPU clusters von Fu, You, Zhou, Wei

    ISSN: 0920-8542, 1573-0484
    Veröffentlicht: New York Springer US 01.05.2022
    Veröffentlicht in The Journal of supercomputing (01.05.2022)
    “… Biological interaction databases accommodate information about interacted proteins or genes. Clustering on the networks formed by the interaction information …”
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    Journal Article
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    Adaptive Markov Clustering Algorithm for Optimal Event Detection From Heterogeneous News Documents von Al-Dyani, Wafa Zubair

    ISSN: 2169-3536, 2169-3536
    Veröffentlicht: Piscataway IEEE 2024
    Veröffentlicht in IEEE access (2024)
    “… ) techniques based on wrapping the Markov Clustering Algorithm (MCL) with the Binary Bat Algorithm (BBA …”
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    Module overlapping structure detection in PPI using an improved link similarity-based Markov clustering algorithm von L. Gu, Han, Y, Wang, C, Chen, Wei, Jiao, Jun, Yuan, X

    ISSN: 0941-0643, 1433-3058
    Veröffentlicht: Heidelberg Springer Nature B.V 03.05.2019
    Veröffentlicht in Neural computing & applications (03.05.2019)
    “… with biological significance in PPI networks, we propose a Markov clustering algorithm based on link similarity (MLS). First of all, the weighted link similarity is calculated …”
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    Journal Article
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    Unsupervised Wavelet-Feature Correlation Ratio Markov Clustering Algorithm for Remotely Sensed Images von Wang, Zhaohui

    ISSN: 2076-3417, 2076-3417
    Veröffentlicht: Basel MDPI AG 01.01.2024
    Veröffentlicht in Applied sciences (01.01.2024)
    “… The wavelet-feature correlation ratio Markov clustering algorithm (WFCRMCA) for remotely sensed data is proposed based on an accurate description of abrupt spectral features and an optimized Markov clustering in the wavelet feather space …”
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    Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm von Gibbons, Theodore R., Mount, Stephen M., Cooper, Endymion D., Delwiche, Charles F.

    ISSN: 1471-2105, 1471-2105
    Veröffentlicht: London BioMed Central 10.07.2015
    Veröffentlicht in BMC bioinformatics (10.07.2015)
    “… Background Clustering protein sequences according to inferred homology is a fundamental step in the analysis of many large data sets. Since the publication of …”
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    Journal Article
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    Operon Prediction Model Based on Markov Clustering Algorithm von Liu, Yanfeng, Liang, Yongquan

    ISSN: 1314-1902, 1314-2321
    Veröffentlicht: Sophia Bulgarska Akademiya na Naukite / Bulgarian Academy of Sciences 01.03.2019
    Veröffentlicht in Bioautomation (01.03.2019)
    “… In this paper, an operon prediction model based on Markov clustering algorithm is proposed. The model uses some generic attribute information of genomes and graph clustering algorithm instead of classifier to predict operon …”
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    A modified two-stage Markov clustering algorithm for large and sparse networks von Szilágyi, László, Szilágyi, Sándor M.

    ISSN: 0169-2607, 1872-7565, 1872-7565
    Veröffentlicht: Ireland Elsevier Ireland Ltd 01.10.2016
    Veröffentlicht in Computer methods and programs in biomedicine (01.10.2016)
    “… •A fast and memory efficient, two-stage Markov clustering algorithm is proposed.•The algorithm is designed for the analysis of large and sparse graphs …”
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    RETRACTED ARTICLE: Module overlapping structure detection in PPI using an improved link similarity-based Markov clustering algorithm von Gu, L., Han, Y., Wang, C., Chen, Wei, Jiao, Jun, Yuan, X.

    ISSN: 0941-0643, 1433-3058
    Veröffentlicht: London Springer London 03.05.2019
    Veröffentlicht in Neural computing & applications (03.05.2019)
    “… with biological significance in PPI networks, we propose a Markov clustering algorithm based on link similarity (MLS). First of all, the weighted link similarity is calculated …”
    Volltext
    Journal Article
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    Protein Clustering in Formation of Falciparum Plasmodium using Soft Regularized-Markov Clustering Algorithm von Amrullah, Hafizh, Wisnubroto, Syamsuddin

    ISSN: 2686-5335, 2716-2478
    Veröffentlicht: UIN Syarif Hidayatullah 31.12.2019
    Veröffentlicht in InPrime (31.12.2019)
    “… AbstractProtein has an important role in our life. Every protein interacts with other proteins, DNA, and other molecules. It forms a very large protein …”
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    Efficient Markov clustering algorithm for protein sequence grouping von Szilagyi, Laszlo, Szilagyi, Sandor M.

    ISSN: 1094-687X, 1557-170X, 2694-0604, 2694-0604
    Veröffentlicht: United States IEEE 01.01.2013
    “… In this paper we propose an efficient reformulation of a Markov clustering algorithm, suitable for fast and accurate grouping of protein sequences, based on pairwise similarity information …”
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    Tagungsbericht Journal Article
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    Evolutionary Markov Dynamics for Network Community Detection von Wang, Zhen, Wang, Chunyu, Li, Xianghua, Gao, Chao, Li, Xuelong, Zhu, Junyou

    ISSN: 1041-4347, 1558-2191
    Veröffentlicht: New York IEEE 01.03.2022
    Veröffentlicht in IEEE transactions on knowledge and data engineering (01.03.2022)
    “… Community structure division is a crucial problem in the field of network data analysis. Algorithms based on Markov chains are easy to use and provide …”
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    Bag-of-word based brand recognition using Markov clustering algorithm for codebook generation von Benezeth, Yannick, Bertaux, Aurelie, Manceau, Aldric

    Veröffentlicht: IEEE 01.09.2015
    “… In order to address the issue of counterfeiting online, it is necessary to use automatic tools that analyze the large amount of information available over the …”
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    Tagungsbericht
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    A soft computing approach for benign and malicious web robot detection von Zabihimayvan, Mahdieh, Sadeghi, Reza, Rude, H. Nathan, Doran, Derek

    ISSN: 0957-4174, 1873-6793
    Veröffentlicht: New York Elsevier Ltd 30.11.2017
    Veröffentlicht in Expert systems with applications (30.11.2017)
    “… •We propose a method called SMART (Soft computing for MAlicious RoboT detection).•The method detects benign and malicious robots, and human visitors to a web …”
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    Unsupervised Wavelet-Feature Markov Clustering Algorithm for Remotely Sensed Images von Wang, Zhaohui

    ISSN: 2641-5542
    Veröffentlicht: IEEE 09.12.2020
    “… Wavelet-feature Markov clustering algorithm for the remotely sensed data is based on an accurate description of abrupt spectral features and an optimized Markov clustering in the wavelet feather space …”
    Volltext
    Tagungsbericht
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    Network Community Detection Based on the Physarum-Inspired Computational Framework von Gao, Chao, Liang, Mingxin, Li, Xianghua, Zhang, Zili, Wang, Zhen, Zhou, Zhili

    ISSN: 1545-5963, 1557-9964
    Veröffentlicht: United States IEEE 01.11.2018
    “… Community detection is a crucial and essential problem in the structure analytics of complex networks, which can help us understand and predict the …”
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