Výsledky vyhledávání - "Datasets as Topic/statistics & numerical data"

Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics Autor Luecken, Malte D., Sikkema, Lisa, Waghray, Avinash, Heimberg, Graham, Kobayashi, Yoshihiko, Vaishnav, Eeshit Dhaval, Subramanian, Ayshwarya, Smillie, Christopher, Jagadeesh, Karthik A., Duong, Elizabeth Thu, Torlai Triglia, Elena, Ansari, Meshal, Cai, Peiwen, Lin, Brian, Chen, Sijia, Shu, Jian, Haber, Adam L., Chung, Hattie, Montoro, Daniel T., Adams, Taylor, Aliee, Hananeh, Andrusivova, Zaneta, Angelidis, Ilias, Ashenberg, Orr, Bassler, Kevin, Bécavin, Christophe, Benhar, Inbal, Bergenstråhle, Joseph, Bergenstråhle, Ludvig, Braun, Emelie, Bui, Linh T., Chaffin, Mark, Chichelnitskiy, Evgeny, Chiou, Joshua, Conlon, Thomas M., Cuoco, Michael S., Cuomo, Anna S. E., Deprez, Marie, Duclos, Grant, Fischer, David S., Ghazanfar, Shila, Gillich, Astrid, Giotti, Bruno, Gould, Joshua, Guo, Minzhe, Gutierrez, Austin J., Habermann, Arun C., Harvey, Tyler, He, Peng, Hou, Xiaomeng, Hu, Yan, Jaiswal, Alok, Ji, Lu, Jiang, Peiyong, Kapellos, Theodoros S., Kuo, Christin S., Leney-Greene, Michael A., Lim, Kyungtae, Litviňuková, Monika, Ludwig, Leif S., Lukassen, Soeren, Luo, Wendy, Maatz, Henrike, Madissoon, Elo, Mamanova, Lira, Manakongtreecheep, Kasidet, Leroy, Sylvie, Mayr, Christoph H., McAdams, Alexi M., Nabhan, Ahmad N., Nyquist, Sarah K., Penland, Lolita, Poirion, Olivier B., Poli, Sergio, Qi, CanCan, Queen, Rachel, Reichart, Daniel, Rosas, Ivan, Schupp, Jonas C., Shea, Conor V., Shi, Xingyi, Sinha, Rahul, Slowikowski, Kamil, Smith, Neal P., Sountoulidis, Alex, Strunz, Maximilian, Sullivan, Travis B., Sun, Dawei, Talavera-López, Carlos, Tan, Peng, Tantivit, Jessica, Travaglini, Kyle J., Tucker, Nathan R., Vernon, Katherine A., Wadsworth, Marc H., Waldman, Julia, Wang, Xiuting, Yan, Wenjun, Zhao, William, Ziegler, Carly G. K.

“…Angiotensin-converting enzyme 2 (ACE2) and accessory proteases (TMPRSS2 and CTSL) are needed for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)…”
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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update Autor Afgan, Enis, Baker, Dannon, van den Beek, Marius, Blankenberg, Daniel, Bouvier, Dave, Čech, Martin, Chilton, John, Clements, Dave, Coraor, Nate, Eberhard, Carl, Grüning, Björn, Guerler, Aysam, Hillman-Jackson, Jennifer, Von Kuster, Greg, Rasche, Eric, Soranzo, Nicola, Turaga, Nitesh, Taylor, James, Nekrutenko, Anton, Goecks, Jeremy

“…High-throughput data production technologies, particularly 'next-generation' DNA sequencing, have ushered in widespread and disruptive changes to biomedical…”
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Variability in the analysis of a single neuroimaging dataset by many teams Autor Botvinik-Nezer, Rotem, Holzmeister, Felix, Camerer, Colin F., Dreber, Anna, Johannesson, Magnus, Kirchler, Michael, Iwanir, Roni, Avesani, Paolo, Baczkowski, Blazej M., Bakst, Leah, Ball, Sheryl, Bault, Nadège, Beaton, Derek, Berkers, Ruud M. W. J., Biswal, Bharat B., Bortolini, Tiago, Bowring, Alexander, Braem, Senne, Brooks, Hayley R., Brudner, Emily G., Calderon, Cristian B., Camilleri, Julia A., Castrellon, Jaime J., Dadi, Kamalaker, Davis, Charles P., Luca, Alberto De, Delgado, Mauricio R., Demetriou, Lysia, Dennison, Jeffrey B., Dickie, Erin W., Dobryakova, Ekaterina, Dukart, Juergen, Duncan, Niall W., Fricke, G. Matthew, Fu, Shiguang, Genon, Sarah, Glatard, Tristan, Golowin, Sergej A. E., Gorgolewski, Krzysztof J., Guassi Moreira, João F., Harry, Bronson B., Herholz, Peer, Herman, Gabrielle, Hoffstaedter, Felix, Huettel, Scott A., Hughes, Matthew E., Iordan, Alexandru D., Isager, Peder M., Isik, Ayse I., Joseph, Michael J. E., Juliano, Anthony C., Kassinopoulos, Michalis, Koba, Cemal, Koscik, Timothy R., Kuhl, Brice A., Lauharatanahirun, Nina, Lee, Hongmi, Leemans, Alexander, Li, Monica Y. C., Liphardt, Schuyler W., Losecaat Vermeer, Annabel B., Mack, Michael L., Malpica, Norberto, Melero, Helena, Meyer, Benjamin, Meyer, Kristin N., Mihai, Glad, Nilsonne, Gustav, Notter, Michael P., Onicas, Adrian I., Papale, Paolo, Pérez, Alexandre, Pischedda, Doris, Reynolds, Richard C., Ricciardi, Emiliano, Rieck, Jenny R., Schlichting, Margaret L., Sheridan, Margaret A., Skagerlund, Kenny, Smith, Alec, Sokol-Hessner, Peter, Tashjian, Sarah M., Tisdall, Loreen, Tozzi, Leonardo, Turella, Luca, Vijayarajah, Sagana, Weeda, Wouter D., White, David J., Wisniewski, David, Xifra-Porxas, Alba, Yearling, Emily A., Yoon, Sangsuk, Yuan, Rui, Yuen, Kenneth S. L., Zhang, Lei, Zhang, Xu, Zosky, Joshua E., Nichols, Thomas E., Poldrack, Russell A., Schonberg, Tom

“…Data analysis workflows in many scientific domains have become increasingly complex and flexible. Here we assess the effect of this flexibility on the results…”
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METLIN: A Technology Platform for Identifying Knowns and Unknowns Autor Guijas, Carlos, Montenegro-Burke, J Rafael, Domingo-Almenara, Xavier, Palermo, Amelia, Warth, Benedikt, Hermann, Gerrit, Koellensperger, Gunda, Huan, Tao, Uritboonthai, Winnie, Aisporna, Aries E, Wolan, Dennis W, Spilker, Mary E, Benton, H Paul, Siuzdak, Gary

“…METLIN originated as a database to characterize known metabolites and has since expanded into a technology platform for the identification of known and unknown…”
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Multi-trait analysis of genome-wide association summary statistics using MTAG Autor Turley, Patrick, Walters, Raymond K., Maghzian, Omeed, Okbay, Aysu, Lee, James J., Fontana, Mark Alan, Nguyen-Viet, Tuan Anh, Wedow, Robbee, Zacher, Meghan, Furlotte, Nicholas A., Magnusson, Patrik, Oskarsson, Sven, Johannesson, Magnus, Visscher, Peter M., Laibson, David, Cesarini, David, Neale, Benjamin M., Benjamin, Daniel J.

“…We introduce multi-trait analysis of GWAS (MTAG), a method for joint analysis of summary statistics from genome-wide association studies (GWAS) of different…”
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The CIRCORT database: Reference ranges and seasonal changes in diurnal salivary cortisol derived from a meta-dataset comprised of 15 field studies Autor Miller, Robert, Stalder, Tobias, Jarczok, Marc, Almeida, David M., Badrick, Ellena, Bartels, Meike, Boomsma, Dorret I., Coe, Christopher L., Dekker, Marieke C.J., Donzella, Bonny, Fischer, Joachim E., Gunnar, Megan R., Kumari, Meena, Lederbogen, Florian, Power, Christine, Ryff, Carol D., Subramanian, S.V., Tiemeier, Henning, Watamura, Sarah E., Kirschbaum, Clemens

“…•The CIRCORT database comprises 104,623 saliva cortisol samples from 18,698 individuals.•Lifespan- and sex-specific reference ranges (LC/MS-MS) for diurnal…”
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On the comparison of the strength of morphological integration across morphometric datasets Autor Adams, Dean C., Collyer, Michael L.

“…Evolutionary morphologists frequently wish to understand the extent to which organisms are integrated, and whether the strength of morphological integration…”
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The PRO-ACT database: design, initial analyses, and predictive features Autor Atassi, Nazem, Berry, James, Shui, Amy, Zach, Neta, Sherman, Alexander, Sinani, Ervin, Walker, Jason, Katsovskiy, Igor, Schoenfeld, David, Cudkowicz, Merit, Leitner, Melanie

“…To pool data from completed amyotrophic lateral sclerosis (ALS) clinical trials and create an open-access resource that enables greater understanding of the…”
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Separating Fractal and Oscillatory Components in the Power Spectrum of Neurophysiological Signal Autor Wen, Haiguang, Liu, Zhongming

“…Neurophysiological field-potential signals consist of both arrhythmic and rhythmic patterns indicative of the fractal and oscillatory dynamics arising from…”
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Media Use Is Linked to Lower Psychological Well-Being: Evidence from Three Datasets Autor Twenge, Jean M., Campbell, W. Keith

“…Adolescents spend a substantial and increasing amount of time using digital media (smartphones, computers, social media, gaming, Internet), but existing…”
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Individualized Prediction of Reading Comprehension Ability Using Gray Matter Volume Autor Cui, Zaixu, Su, Mengmeng, Li, Liangjie, Shu, Hua, Gong, Gaolang

“…Reading comprehension is a crucial reading skill for learning and putatively contains 2 key components: reading decoding and linguistic comprehension. Current…”
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Internal-external cross-validation helped to evaluate the generalizability of prediction models in large clustered datasets Autor Takada, Toshihiko, Nijman, Steven, Denaxas, Spiros, Snell, Kym I.E., Uijl, Alicia, Nguyen, Tri-Long, Asselbergs, Folkert W., Debray, Thomas P.A.

“…To illustrate how to evaluate the need of complex strategies for developing generalizable prediction models in large clustered datasets. We developed eight Cox…”
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Meta-analysis of Icelandic and UK data sets identifies missense variants in SMO, IL11, COL11A1 and 13 more new loci associated with osteoarthritis Autor Styrkarsdottir, Unnur, Lund, Sigrun H., Thorleifsson, Gudmar, Zink, Florian, Stefansson, Olafur A., Sigurdsson, Jon K., Juliusson, Kristinn, Bjarnadottir, Kristbjörg, Sigurbjornsdottir, Sara, Jonsson, Stefan, Norland, Kristjan, Stefansdottir, Lilja, Sigurdsson, Asgeir, Sveinbjornsson, Gardar, Oddsson, Asmundur, Bjornsdottir, Gyda, Gudmundsson, Reynir L., Halldorsson, Gisli H., Rafnar, Thorunn, Jonsdottir, Ingileif, Steingrimsson, Eirikur, Norddahl, Gudmundur L., Masson, Gisli, Sulem, Patrick, Jonsson, Helgi, Ingvarsson, Thorvaldur, Gudbjartsson, Daniel F., Thorsteinsdottir, Unnur, Stefansson, Kari

“…Osteoarthritis has a highly negative impact on quality of life because of the associated pain and loss of joint function. Here we describe the largest…”
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Sex and BMI Alter the Benefits and Risks of Sulfonylureas and Thiazolidinediones in Type 2 Diabetes: A Framework for Evaluating Stratification Using Routine Clinical and Individual Trial Data Autor Dennis, John M, Henley, William E, Weedon, Michael N, Lonergan, Mike, Rodgers, Lauren R, Jones, Angus G, Hamilton, William T, Sattar, Naveed, Janmohamed, Salim, Holman, Rury R, Pearson, Ewan R, Shields, Beverley M, Hattersley, Andrew T

“…The choice of therapy for type 2 diabetes after metformin is guided by overall estimates of glycemic response and side effects seen in large cohorts. A…”
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Why we need a small data paradigm Autor Hekler, Eric B., Klasnja, Predrag, Chevance, Guillaume, Golaszewski, Natalie M., Lewis, Dana, Sim, Ida

“…Background There is great interest in and excitement about the concept of personalized or precision medicine and, in particular, advancing this vision via…”
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Cadec: A corpus of adverse drug event annotations Autor Karimi, Sarvnaz, Metke-Jimenez, Alejandro, Kemp, Madonna, Wang, Chen

“…[Display omitted] •Introduction of CADEC an annotated corpus of consumer reviews in pharmacovigilance.•A review and comparison of available relevant…”
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Power Analysis and Sample Size Determination in Metabolic Phenotyping Autor Blaise, Benjamin J, Correia, Gonçalo, Tin, Adrienne, Young, J Hunter, Vergnaud, Anne-Claire, Lewis, Matthew, Pearce, Jake T M, Elliott, Paul, Nicholson, Jeremy K, Holmes, Elaine, Ebbels, Timothy M D

“…Estimation of statistical power and sample size is a key aspect of experimental design. However, in metabolic phenotyping, there is currently no accepted…”
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Data-driven diagnosis of spinal abnormalities using feature selection and machine learning algorithms Autor Raihan-Al-Masud, Md, Mondal, M. Rubaiyat Hossain

“…This paper focuses on the application of machine learning algorithms for predicting spinal abnormalities. As a data preprocessing step, univariate feature…”
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Latent source mining in FMRI via restricted Boltzmann machine Autor Hu, Xintao, Huang, Heng, Peng, Bo, Han, Junwei, Liu, Nian, Lv, Jinglei, Guo, Lei, Guo, Christine, Liu, Tianming

“…Blind source separation (BSS) is commonly used in functional magnetic resonance imaging (fMRI) data analysis. Recently, BSS models based on restricted…”
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The Banksia plot: a method for visually comparing point estimates and confidence intervals across datasets Autor Turner, Simon L., Karahalios, Amalia, Korevaar, Elizabeth, McKenzie, Joanne E.

“…In research evaluating statistical analysis methods, a common aim is to compare point estimates and CIs calculated from different analyses. This can be…”
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