Výsledky vyhľadávania - (( (state OR stat) python code analysis ) OR ( (statement OR state:md) python code analysis ))

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  1. 1

    PSHRisk-Tool: A Python-Based Computational Tool for Developing Site Seismic Hazard Analysis and Failure Risk Assessment of Infrastructure Autor Nahar, Tahmina Tasnim, Rahman, Md Motiur, Kim, Dookie

    ISSN: 2076-3417, 2076-3417
    Vydavateľské údaje: Basel MDPI AG 01.10.2020
    Vydané v Applied sciences (01.10.2020)
    “… vulnerable condition for the infrastructure. This python-code based tool can demonstrate the source identification, probability distribution plot of magnitude and distance…”
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    Journal Article
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    mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data Autor Pérez-Hernández, Guillermo, Hildebrand, Peter W.

    ISSN: 1553-7358, 1553-734X, 1553-7358
    Vydavateľské údaje: United States Public Library of Science 21.04.2025
    Vydané v PLoS computational biology (21.04.2025)
    “…) for easy, one-shot analysis and representation of molecular dynamics (MD) simulation data. Building upon the widely used concept of residue-residue contact-frequencies…”
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    Journal Article
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    WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation Data Autor Yang, Darian T, Chong, Lillian T

    ISSN: 1549-960X
    Vydavateľské údaje: United States 12.08.2024
    “… Here, we present the WEDAP Python package for simplifying the analysis of data generated from either conventional MD simulations or the weighted ensemble…”
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  4. 4

    MDAnalysis: A toolkit for the analysis of molecular dynamics simulations Autor Michaud-Agrawal, Naveen, Denning, Elizabeth J., Woolf, Thomas B., Beckstein, Oliver

    ISSN: 0192-8651, 1096-987X, 1096-987X
    Vydavateľské údaje: Hoboken Wiley Subscription Services, Inc., A Wiley Company 30.07.2011
    Vydané v Journal of computational chemistry (30.07.2011)
    “…MDAnalysis is an object‐oriented library for structural and temporal analysis of molecular dynamics (MD…”
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    Journal Article
  5. 5

    interlab: A Python Module for Analyzing Interlaboratory Comparison Data Autor Sheen, David A.

    ISSN: 2165-7254, 1044-677X, 2165-7254
    Vydavateľské údaje: Gaithersburg National Institute of Standards and Technology 01.01.2019
    “…interlab was developed as a software tool to perform consensus analysis on spectral data from interlaboratory studies…”
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  6. 6

    Enabling grand-canonical Monte Carlo: Extending the flexibility of GROMACS through the GromPy python interface module Autor Pool, René, Heringa, Jaap, Hoefling, Martin, Schulz, Roland, Smith, Jeremy C., Feenstra, K. Anton

    ISSN: 0192-8651, 1096-987X
    Vydavateľské údaje: Hoboken Wiley Subscription Services, Inc., A Wiley Company 05.05.2012
    Vydané v Journal of computational chemistry (05.05.2012)
    “…We report on a python interface to the GROMACS molecular simulation package, GromPy (available at https://github.com/GromPy…”
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    Journal Article
  7. 7

    iCn3D: From Web-Based 3D Viewer to Structural Analysis Tool in Batch Mode Autor Wang, Jiyao, Youkharibache, Philippe, Marchler-Bauer, Aron, Lanczycki, Christopher, Zhang, Dachuan, Lu, Shennan, Madej, Thomas, Marchler, Gabriele H., Cheng, Tiejun, Chong, Li Chuin, Zhao, Sarah, Yang, Kevin, Lin, Jack, Cheng, Zhiyu, Dunn, Rachel, Malkaram, Sridhar Acharya, Tai, Chin-Hsien, Enoma, David, Busby, Ben, Johnson, Nicholas L., Tabaro, Francesco, Song, Guangfeng, Ge, Yuchen

    ISSN: 2296-889X, 2296-889X
    Vydavateľské údaje: Switzerland Frontiers Media S.A 17.02.2022
    Vydané v Frontiers in molecular biosciences (17.02.2022)
    “… scripts in a FAIR manner. More recently, with the growth of structural databases, the need to analyze large structural datasets systematically led us to use Python scripts and convert the code to be used in Node. js scripts…”
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    Journal Article
  8. 8

    BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories Autor Mukhaleva, Elizaveta, Manookian, Babgen, Chen, Hanyu, Sivaraj, Indira R, Ma, Ning, Wei, Wenyuan, Urbaniak, Konstancja, Gogoshin, Grigoriy, Bhattacharya, Supriyo, Vaidehi, Nagarajan, Rodin, Andrei S, Branciamore, Sergio

    ISSN: 1549-960X
    Vydavateľské údaje: United States 10.02.2025
    “… However, the analysis of MD simulation trajectories has not been data-driven but rather dependent on the user's prior knowledge of the systems, thus limiting the scope and utility of the MD simulations…”
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  9. 9

    ChatGPT for Univariate Statistics: Validation of AI‐Assisted Data Analysis in Healthcare Research Autor Ruta, Michael R, Gaidici, Tony, Irwin, Chase, Lifshitz, Jonathan

    ISSN: 1438-8871, 1439-4456, 1438-8871
    Vydavateľské údaje: Canada Journal of Medical Internet Research 07.02.2025
    Vydané v Journal of medical Internet research (07.02.2025)
    “… With the recent integration of Python code interpretation into the ChatGPT environment, there has been a significant increase in the potential utility of ChatGPT as a research tool, particularly…”
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  10. 10

    Percolation theory using Python Autor Malthe-Sørenssen, Anders

    ISBN: 3031598997, 9783031598999, 3031599004, 9783031599002
    Vydavateľské údaje: Cham Springer 2024
    “… Readers will learn how to generate, analyze, and comprehend data and models, with detailed theoretical discussions complemented by accessible computer codes…”
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    E-kniha Kniha
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    GenEvaPa: A generic evaporation package for modeling evaporation in molecular dynamics simulations Autor Harris, Bradley, Liu, Gang-yu, Faller, Roland

    ISSN: 0010-4655, 1879-2944
    Vydavateľské údaje: United States Elsevier B.V 01.01.2023
    Vydané v Computer physics communications (01.01.2023)
    “…This work presents a novel general tool for modeling the process of evaporation without the need for modifying existing software using Python…”
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    An Implementation of the Fundamental Parameters Approach for Analysis of X-ray Powder Diffraction Line Profiles Autor Mendenhall, Marcus H, Mullen, Katharine, Cline, James P

    ISSN: 1044-677X, 2165-7254
    Vydavateľské údaje: United States National Institute of Standards and Technology 2015
    “…) models for analysis of X-ray powder diffraction line profiles. The original literature describing these models was examined and code was developed to allow for their use within a Python based least squares refinement algorithm…”
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    Journal Article
  14. 14

    Preliminary Experience and Learning Outcomes by Infusing Interactive and Active Learning to Teach an Introductory Programming Course in Python Autor Rahman, Md Mahmudur, Paudel, Roshan

    Vydavateľské údaje: Athens The Steering Committee of The World Congress in Computer Science, Computer Engineering and Applied Computing (WorldComp) 01.01.2018
    “…A core challenge in introductory programming courses during the freshmen year is getting students to understand how a static textual representation (source code…”
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    Konferenčný príspevok..
  15. 15

    Handwritten Code Recognition for Pen-and-Paper CS Education Autor Md Sazzad Islam, Moussa Koulako Bala Doumbouya, Manning, Christopher D, Piech, Chris

    ISSN: 2331-8422
    Vydavateľské údaje: Ithaca Cornell University Library, arXiv.org 07.08.2024
    Vydané v arXiv.org (07.08.2024)
    “… Optical character recognition (OCR) of handwritten code is challenging…”
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    Paper
  16. 16

    Fitting Splines to Axonal Arbors Quantifies Relationship Between Branch Order and Geometry Autor Athey, Thomas L., Teneggi, Jacopo, Vogelstein, Joshua T., Tward, Daniel J., Mueller, Ulrich, Miller, Michael I.

    ISSN: 1662-5196, 1662-5196
    Vydavateľské údaje: Lausanne Frontiers Research Foundation 11.08.2021
    Vydané v Frontiers in neuroinformatics (11.08.2021)
    “… It is also implicated in neurological disease. However, standard morphological analysis focuses on macroscopic features such as branching frequency and connectivity between regions, and often neglects the internal geometry of neurons…”
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    Journal Article
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    WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation Data Autor Yang, Darian T, Chong, Lillian T

    ISSN: 2692-8205, 2692-8205
    Vydavateľské údaje: United States Cold Spring Harbor Laboratory 21.05.2024
    Vydané v bioRxiv (21.05.2024)
    “… Here, we present the WEDAP Python package for simplifying the analysis of data generated from either conventional MD simulations or the weighted ensemble…”
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    Journal Article Paper
  18. 18

    Neurophysiological analytics for all! Free open-source software tools for documenting, analyzing, visualizing, and sharing using electronic notebooks Autor Rosenberg, David M, Horn, Charles C

    ISSN: 1522-1598
    Vydavateľské údaje: United States 01.08.2016
    Vydané v Journal of neurophysiology (01.08.2016)
    “…Neurophysiology requires an extensive workflow of information analysis routines, which often includes incompatible proprietary software, introducing limitations based on financial costs, transfer…”
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  19. 19

    Decoding the JAK-STAT Axis in Colorectal Cancer with AI-HOPE-JAK-STAT: A Conversational Artificial Intelligence Approach to Clinical–Genomic Integration Autor Yang, Ei-Wen, Waldrup, Brigette, Velazquez-Villarreal, Enrique

    ISSN: 2072-6694, 2072-6694
    Vydavateľské údaje: Switzerland MDPI AG 17.07.2025
    Vydané v Cancers (17.07.2025)
    “…: AI-HOPE-JAK-STAT combines large language models (LLMs), a natural language-to-code engine, and harmonized public CRC datasets from cBioPortal…”
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    Journal Article
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    Introduction to computational causal inference using reproducible Stata, R, and Python code: A tutorial Autor Smith, Matthew J., Mansournia, Mohammad A., Maringe, Camille, Zivich, Paul N., Cole, Stephen R., Leyrat, Clémence, Belot, Aurélien, Rachet, Bernard, Luque‐Fernandez, Miguel A.

    ISSN: 0277-6715, 1097-0258, 1097-0258
    Vydavateľské údaje: England Wiley Subscription Services, Inc 30.01.2022
    Vydané v Statistics in medicine (30.01.2022)
    “…The main purpose of many medical studies is to estimate the effects of a treatment or exposure on an outcome. However, it is not always possible to randomize…”
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    Journal Article