Search Results - path consistency algorithm based on conditional mutual information

Inferring gene regulatory networks from gene expression data by path consistency algorithm based on conditional mutual information by Zhang, Xiujun, Zhao, Xing-Ming, He, Kun, Lu, Le, Cao, Yongwei, Liu, Jingdong, Hao, Jin-Kao, Liu, Zhi-Ping, Chen, Luonan

“…Motivation: Reconstruction of gene regulatory networks (GRNs), which explicitly represent the causality of developmental or regulatory process, is of utmost…”
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Inferring Gene Regulatory Networks Via Ensemble Path Consistency Algorithm Based on Conditional Mutual Information by Xu, Jie, Yang, Guanxue, Liu, Guohai, Liu, Hui

“… In order to solve this problem, we introduce a novel algorithms called ensemble path consistency algorithm based on conditional mutual information (EPCACMI…”
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Inference of Gene Regulatory Networks with Local Lasso Path Consistency Algorithm Based on Conditional Mutual Information by Yang, Guanxue, Wang, Chunnian, Yang, Guanxiao

“… Various methods based on information theory have been applied to infer the GRNs. However, due to the nonlinear relationship between genes, the sparsity in the network…”
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Inferring gene regulatory network using path consistency algorithm based on conditional mutual information and genetic algorithm by Iranmanesh, Sima, Sattari-Naeini, Vahid, Ghavami, Behnam

“… genetic diseases and drug discovery applications. In this paper, a method for inferring the gene regulatory network using a combination of Genetic Algorithm and Path Consistency Algorithm based on Conditional Mutual information is presented…”
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GAEM: Genetic Algorithm based Expectation-Maximization for inferring Gene Regulatory Networks from incomplete data by Niloofar, Parisa, Aghdam, Rosa, Eslahchi, Changiz

“… One popular method for inferring the structure GRNs is to apply the Path Consistency Algorithm based on Conditional Mutual Information (PCA-CMI…”
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IPCA-CMI: An Algorithm for Inferring Gene Regulatory Networks based on a Combination of PCA-CMI and MIT Score by Aghdam, Rosa, Ganjali, Mojtaba, Eslahchi, Changiz

“… The Path Consistency Algorithm based on Conditional Mutual Information (PCA-CMI) is a well-known method in this field…”
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Reverse Engineering Gene Regulatory Networks Based on Dynamic Threshold Condition Mutual Information With Resampling Strategy by Xu, Jie, Yang, Guanxue, Liu, Guohai, Yang, Guanxiao

“…s. Path consistency algorithm based on conditional mutual information (PCACMI) is a practical algorithm to reconstruct gene regulation networks, but the threshold is fixed, which will affect the accuracy of the reconstructed networks…”
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Identifying biomarkers for breast cancer by gene regulatory network rewiring by Wang, Yijuan, Liu, Zhi-Ping

“… We employ the algorithm based on path consistency algorithm and conditional mutual information to delete false-positive regulatory interactions between independent nodes/genes or not closely related gene pairs…”
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IPCA-CMI: An Algorithm for Inferring Gene Regulatory Networks based on a Combination of PCA-CMI and MIT Score: e92600 by Aghdam, Rosa, Ganjali, Mojtaba, Eslahchi, Changiz

“… The Path Consistency Algorithm based on Conditional Mutual Information (PCA-CMI) is a well-known method in this field…”
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An integrated gene regulatory network inference pipeline by Wang Yong, Katsuhisa, Horimoto, Chen Luonan

“…Rapidly accumulated gene expression data put forward the development of numerous methods for inferring gene regulatory networks and the efforts for critical…”
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Inferring gene regulatory networks by an order independent algorithm using incomplete data sets by Aghdam, Rosa, Ganjali, Mojtaba, Niloofar, Parisa, Eslahchi, Changiz

“…) algorithm based on conditional mutual information (PCA-CMI) is a famous algorithm for inferring GRNs…”
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CN: a consensus algorithm for inferring gene regulatory networks using the SORDER algorithm and conditional mutual information test by Aghdam, Rosa, Ganjali, Mojtaba, Zhang, Xiujun, Eslahchi, Changiz

“… The Path Consistency (PC) algorithm is one of the popular methods in this field. However, as an order dependent algorithm, PC algorithm is not robust because it achieves different network topologies if gene orders are permuted…”
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An order independent algorithm for inferring gene regulatory network using quantile value for conditional independence tests by Mahmoodi, Sayyed Hadi, Aghdam, Rosa, Eslahchi, Changiz

“…). The Path Consistency (PC) algorithm is one of the popular methods to infer the structure of GRNs…”
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Inferring Gene Regulatory Networks Using Conditional Regulation Pattern to Guide Candidate Genes by Xiao, Fei, Gao, Lin, Ye, Yusen, Hu, Yuxuan, He, Ruijie

“…Combining path consistency (PC) algorithms with conditional mutual information (CMI) are widely used in reconstruction of gene regulatory networks…”
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Algorithms And Architectures for Parallel Processing: 1997 3rd International Conference by Goscinski, Andrzej, Hobbs, Michael, Zhou, Wanlei

“…The Table of Contents for the book is as follows: Preface PART I INTRODUCTION Chapter 1 Basic Issues of Algorithms and Architectures for Parallel Processing…”
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