Search Results - computing algorithms and informatics

Molecular Computing and Bioinformatics by Liang, Xin, Zhu, Wen, Lv, Zhibin, Zou, Quan

“…Molecular computing and bioinformatics are two important interdisciplinary sciences that study molecules and computers…”
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New classifications for quantum bioinformatics: Q-bioinformatics, QCt-bioinformatics, QCg-bioinformatics, and QCr-bioinformatics by Mokhtari, Majid, Khoshbakht, Samane, Ziyaei, Kobra, Akbari, Mohammad Esmaeil, Moravveji, Sayyed Sajjad

“…s. This new field employs the principles of quantum mechanics, quantum algorithms, and quantum computing to solve complex problems in molecular biology, drug design, and protein folding…”
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A fast adaptive algorithm for computing whole-genome homology maps by Jain, Chirag, Koren, Sergey, Dilthey, Alexander, Phillippy, Adam M, Aluru, Srinivas

“… Results We introduce an approximate algorithm for computing local alignment boundaries between long DNA sequences…”
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Quantum computing in bioinformatics: a systematic review mapping by Nałęcz-Charkiewicz, Katarzyna, Charkiewicz, Kamil, Nowak, Robert M

“…Abstract The field of quantum computing (QC) is expanding, with efforts being made to apply it to areas previously covered by classical algorithms and methods…”
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Next-generation bioinformatics: using many-core processor architecture to develop a web service for sequence alignment by Gálvez, Sergio, Díaz, David, Hernández, Pilar, Esteban, Francisco J., Caballero, Juan A., Dorado, Gabriel

“…Motivation: Bioinformatics algorithms and computing power are the main bottlenecks for analyzing huge amount of data generated by the current technologies, such as the ‘next-generation…”
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Linear-time algorithms for computing maximum-density sequence segments with bioinformatics applications by Goldwasser, Michael H., Kao, Ming-Yang, Lu, Hsueh-I

“… ) -time algorithm, improving upon the O ( n log L ) -time algorithm by Lin, Jiang and Chao…”
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BOA: A partitioned view of genome assembly by An, Xiaojing, Ghosh, Priyanka, Keppler, Patrick, Kurt, Sureyya Emre, Krishnamoorthy, Sriram, Sadayappan, Ponnuswamy, Rajam, Aravind Sukumaran, Çatalyürek, Ümit V., Kalyanaraman, Ananth

“…De novo genome assembly is a fundamental problem in computational molecular biology that aims to reconstruct an unknown genome sequence from a set of short DNA…”
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Heart beats in the cloud: distributed analysis of electrophysiological 'Big Data' using cloud computing for epilepsy clinical research by Sahoo, Satya S, Jayapandian, Catherine, Garg, Gaurav, Kaffashi, Farhad, Chung, Stephanie, Bozorgi, Alireza, Chen, Chien-Hun, Loparo, Kenneth, Lhatoo, Samden D, Zhang, Guo-Qiang

“… To facilitate secondary use of these data, there is an urgent need to develop novel algorithms and informatics approaches using new cloud computing technologies as well as ontologies…”
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Fast algorithms for computing phylogenetic divergence time by Crosby, Ralph W., Williams, Tiffani L.

“… In this work, we present a new algorithm, AncestralAge, that significantly improves the performance of the divergence time process…”
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Comparison and improvement of algorithms for computing minimal cut sets by Jungreuthmayer, Christian, Nair, Govind, Klamt, Steffen, Zanghellini, Jürgen

“… Two different algorithmic schemes (adapted Berge algorithm and binary integer programming…”
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Performance and scaling behavior of bioinformatic applications in virtualization environments to create awareness for the efficient use of compute resources by Hanussek, Maximilian, Bartusch, Felix, Krüger, Jens

“…The large amount of biological data available in the current times, makes it necessary to use tools and applications based on sophisticated and efficient algorithms, developed in the area of bioinformatic…”
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High-throughput screening of stable and efficient double inorganic halide perovskite materials by DFT by Diao, Xinfeng, Diao, Yongxin, Tang, Yanlin, Zhao, Gangling, Gu, Qinzhong, Xie, Yu, Shi, Yebai, Zhu, Ping, Zhang, Liang

“… In this paper, the inorganic halide double perovskite A 2 BX 6 and its crystal structure are considered, and the data mining algorithm in informatics is introduced into the high-throughput computing…”
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A Multi-Objective Genetic Algorithm-Based Resource Scheduling in Mobile Cloud Computing by Luhach, Ashish Kumar, Ramasubbareddy, Somula, Swetha, Evakattu, Srinivas, T Aditya Sai

“…Mobile cloud computing is an emerging technology in recent years. This technology reduces battery consumption and execution time by executing mobile applications in remote cloud server…”
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A practical O(n log2n) time algorithm for computing the triplet distance on binary trees by Sand, Andreas, Brodal, Gerth Stølting, Fagerberg, Rolf, Pedersen, Christian NS, Mailund, Thomas

“… ). The algorithm is related to an algorithm for computing the quartet distance between two unrooted binary trees in time O ( n log n…”
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Rfold: an exact algorithm for computing local base pairing probabilities by Kiryu, Hisanori, Kin, Taishin, Asai, Kiyoshi

“… Recently, there has been a growing need for computing these probabilities for long DNA sequences by constraining the maximal span of base pairs to a limited value…”
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SenseCare: a research platform for medical image informatics and interactive 3D visualization by Wang, Guotai, Duan, Qi, Shen, Tian, Zhang, Shaoting

“…Clinical research on smart health has an increasing demand for intelligent and clinic-oriented medical image computing algorithms and platforms that support various applications…”
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An ontology for biological function based on molecular interactions by Karp, Peter D.

“… Functional bioinformatics is an emerging subfield of bioinformatics that is concerned with developing ontologies and algorithms for computing with biological function. Results…”
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A parallel computing algorithm for 16S rRNA probe design: Grids in bioinformatics and computational biology by DIANHUI ZHU, FOFANOV, Yuriy, WILLSON, Richard C, FOX, George E

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An efficient multi-objective task scheduling for Green cloud computing using hybrid GSCOA algorithm by Kumar, Kata Vijay, Karri, Ganesh Reddy

“… Green cloud computing (GCC) is a new computing paradigm designed to address cloud data centre energy consumption…”
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Multiple sequence alignment with affine gap by using multi-objective genetic algorithm by Kaya, Mehmet, Sarhan, Abdullah, Alhajj, Reda

“… Although a large number of algorithms for computing a multiple sequence alignment have been designed, the efficient computation of highly accurate and statistically significant multiple alignments is still a challenge…”
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