Search Results - Combined genetic folding and genetic programming algorithm

Combining classifiers generated by multi-gene genetic programming for protein fold recognition using genetic algorithm by Bardsiri, Mahshid Khatibi, Eftekhari, Mahdi, Mousavi, Reza

“…In this study the problem of protein fold recognition, that is a classification task, is solved via a hybrid of evolutionary algorithms namely multi-gene Genetic Programming (GP…”
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A New Method of RNA Secondary Structure Prediction Based on Convolutional Neural Network and Dynamic Programming by Zhang, Hao, Zhang, Chunhe, Li, Zhi, Li, Cong, Wei, Xu, Zhang, Borui, Liu, Yuanning

“… Current RNA secondary structure prediction methods are mainly based on the minimum free energy algorithm, which finds the optimal folding state of RNA using an iterative method to meet the minimum…”
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Steric exclusion and constraint satisfaction in multi-scale coarse-grained simulations by Taylor, William R.

“…•Molecules can then be viewed using an integral graphical viewer or animated through a high-level application programming interface (API) in C++…”
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TIM-Finder: A new method for identifying TIM-barrel proteins by Si, Jing-Na, Yan, Ren-Xiang, Wang, Chuan, Zhang, Ziding, Su, Xiao-Dong

“…Background The triosephosphate isomerase (TIM)-barrel fold occurs frequently in the proteomes of different organisms, and the known TIM-barrel proteins have…”
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Pareto optimization in algebraic dynamic programming by Saule, Cédric, Giegerich, Robert

“… Pareto optimization naturally occurs with genetic algorithms, albeit in a heuristic fashion…”
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Iterative sequence/secondary structure search for protein homologs: comparison with amino acid sequence alignments and application to fold recognition in genome databases by Wallqvist, Anders, Fukunishi, Yoshifumi, Murphy, Lynne Reed, Fadel, Addi, Levy, Ronald M.

“…Motivation: Sequence alignment techniques have been developed into extremely powerful tools for identifying the folding families and function of proteins in newly sequenced genomes…”
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Accurate Detection of Dysmorphic Nuclei Using Dynamic Programming and Supervised Classification by Verschuuren, Marlies, De Vylder, Jonas, Catrysse, Hannes, Robijns, Joke, Philips, Wilfried, De Vos, Winnok H.

“…), which relies on two-pass thresholding for initial nuclear contour detection, and an optimal path finding algorithm, based on dynamic programming, for refining these contours…”
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Three-Dimensional Chromosome Organization in Eukaryotes: Novel Computational Approaches by Gursoy, Gamze

“…DNA is the carrier of genetic information and is passed down from one generation to the next…”
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