Suchergebnisse - Parallel Reverse algorithm

  1. 1

    A parallel algorithm for reverse engineering of biological networks von Bazil, Jason N, Qi, Feng, Beard, Daniel A

    ISSN: 1757-9708, 1757-9708
    Veröffentlicht: England 01.12.2011
    Veröffentlicht in Integrative biology (Cambridge) (01.12.2011)
    “… Such equations can be utilized in reverse engineering these biological networks, specifically since identifying these networks is challenging due to the cost of the necessary experiments growing …”
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  2. 2

    Accelerated parallel algorithm for gene network reverse engineering von He, Jing, Zhou, Zhou, Reed, Michael, Califano, Andrea

    ISSN: 1752-0509, 1752-0509
    Veröffentlicht: London BioMed Central 21.09.2017
    Veröffentlicht in BMC systems biology (21.09.2017)
    “… Background The Algorithm for the Reconstruction of Accurate Cellular Networks (ARACNE) represents one of the most effective tools to reconstruct gene regulatory networks from large-scale molecular profile datasets …”
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  3. 3

    A Parallel and Reverse Learn++.NSE Classification Algorithm von Shen, Yan, Du, Jianguo, Tong, Jingen, Dou, Qian, Jing, Luyi

    ISSN: 2169-3536, 2169-3536
    Veröffentlicht: Piscataway IEEE 2020
    Veröffentlicht in IEEE access (2020)
    “… A Parallel and Reverse Learn++.NSE algorithm, abbreviated as PRLearn++.NSE, is proposed in this paper by changing the ensemble …”
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  4. 4

    A Parallel Implementation of the Network Identification by Multiple Regression (NIR) Algorithm to Reverse-Engineer Regulatory Gene Networks von Gregoretti, Francesco, Belcastro, Vincenzo, di Bernardo, Diego, Oliva, Gennaro

    ISSN: 1932-6203, 1932-6203
    Veröffentlicht: United States Public Library of Science 21.04.2010
    Veröffentlicht in PloS one (21.04.2010)
    “… Using current reverse engineering algorithms to analyze large data sets can be very computational-intensive …”
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  5. 5

    Reverse time migration of GPR data based on GPU parallel Symplectic Euler Algorithm and Total Variation Regularization von Gao, Xin, Lei, Jianwei, Chen, Zhiqing, Fang, Hongyuan

    ISSN: 1742-6588, 1742-6596
    Veröffentlicht: Bristol IOP Publishing 01.11.2024
    Veröffentlicht in Journal of physics. Conference series (01.11.2024)
    “… In terms of efficiency, reverse time migration uses the Finite Difference Time Domain (FDTD) algorithm for parallel CPU computation, which is inefficient …”
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  6. 6

    Parallel Scalability of a Fine-Grain Prestack Reverse Time Migration Algorithm von Nunes-do-Rosario, Desnes A., Xavier-de-Souza, Samuel, Maciel, Rosangela C., Costa, Jesse C.

    ISSN: 1545-598X, 1558-0571
    Veröffentlicht: Piscataway IEEE 01.12.2015
    Veröffentlicht in IEEE geoscience and remote sensing letters (01.12.2015)
    “… Aiming at performance improvement, this work conducted the parallelization of the core of a reverse time migration (RTM) algorithm …”
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  7. 7

    EFMlrs: a Python package for elementary flux mode enumeration via lexicographic reverse search von Buchner, Bianca A, Zanghellini, Jürgen

    ISSN: 1471-2105, 1471-2105
    Veröffentlicht: London BioMed Central Ltd 10.11.2021
    Veröffentlicht in BMC bioinformatics (10.11.2021)
    “… Recently, Avis et al. developed mplrs--a parallel version of the lexicographic reverse search (lrs …”
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  8. 8

    Parallel Algorithms for Inferring Gene Regulatory Networks: A Review von Abbaszadeh, Omid, Khanteymoori, Ali Reza, Azarpeyvand, Ali

    ISSN: 1389-2029
    Veröffentlicht: United Arab Emirates 01.11.2018
    Veröffentlicht in Current genomics (01.11.2018)
    “… In this paper, we attempt to provide a more detailed overview of the recent parallel algorithms for constructing gene regulatory networks …”
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  9. 9

    An Efficient Parallel Reverse Conversion of Residue Code to Mixed-Radix Representation Based on the Chinese Remainder Theorem von Selianinau, Mikhail, Povstenko, Yuriy

    ISSN: 1099-4300, 1099-4300
    Veröffentlicht: Switzerland MDPI AG 05.02.2022
    Veröffentlicht in Entropy (Basel, Switzerland) (05.02.2022)
    “… We present a novel approach to the parallel reverse conversion from the residue code into a weighted number representation in the Mixed-Radix System (MRS …”
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  10. 10

    Computing the Burrows–Wheeler transform of a string and its reverse in parallel von Ohlebusch, Enno, Beller, Timo, Abouelhoda, Mohamed I.

    ISSN: 1570-8667, 1570-8675
    Veröffentlicht: Elsevier B.V 01.03.2014
    “… other. Second, we provide a parallel algorithm that, given the BWT of a string, computes the BWT of its reverse much faster than all known (parallel …”
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  11. 11

    Reverse Engineering and Analysis of Genome-Wide Gene Regulatory Networks from Gene Expression Profiles Using High-Performance Computing von Belcastro, V., Gregoretti, F., Siciliano, V., Santoro, M., D'Angelo, G., Oliva, G., di Bernardo, Diego

    ISSN: 1545-5963, 1557-9964, 1557-9964
    Veröffentlicht: United States IEEE 01.05.2012
    “… In this work, we designed and developed a parallel computing algorithm to reverse-engineer genome-scale gene regulatory networks from thousands of gene expression profiles …”
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  12. 12

    Parallel Computing Algorithms for Reverse-Engineering and Analysis of Genome-Wide Gene Regulatory Networks from Gene Expression Profiles von Belcastro, V, di Bernardo, Diego, Gregoretti, F, Oliva, G

    ISBN: 9780769542652, 9781424487530, 1424487536, 0769542654
    Veröffentlicht: IEEE 01.09.2010
    “… "Reverse engineering" a gene regulatory network means to infer the edges between genes from the available experimental data …”
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  13. 13

    The feasibility of genome-scale biological network inference using Graphics Processing Units von Thiagarajan, Raghuram, Alavi, Amir, Podichetty, Jagdeep T., Bazil, Jason N., Beard, Daniel A.

    ISSN: 1748-7188, 1748-7188
    Veröffentlicht: London BioMed Central 20.03.2017
    Veröffentlicht in Algorithms for molecular biology (20.03.2017)
    “… ) and a parallel reverse engineering algorithm …”
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  14. 14

    Reverse Logistics Optimization Based on Parallel Genetic Algorithm von Sibo Ding

    Veröffentlicht: IEEE 01.05.2010
    “… In order to search for the optimal solution of this model, the paper proposes an algorithm based on the technique of Parallel Genetic Algorithm (PGA …”
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  15. 15

    A high expansion implicit finite-element prestack reverse time migration method von Liu, Limin, Wang, Yun, Wang, Yong, Chen, Jing, Liu, Yanqiu

    ISSN: 0812-3985, 1834-7533
    Veröffentlicht: Taylor & Francis 01.01.2018
    Veröffentlicht in Exploration geophysics (Melbourne) (01.01.2018)
    “… Building on the concepts of cohesion degree and local relaxation, we propose an integrated hierarchical equilibrium parallel finite-element reverse time migration (HEP-FE-RTM …”
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  16. 16

    A Parallel Algorithm for Linear Programs with an Additional Reverse Convex Constraint von Liu, Shih-Mim, Papavassilopoulos, G.P.

    ISSN: 0743-7315, 1096-0848
    Veröffentlicht: San Diego, CA Elsevier Inc 15.09.1997
    Veröffentlicht in Journal of parallel and distributed computing (15.09.1997)
    “… A parallel method for globally minimizing a linear program with an additional reverse convex constraint is proposed which combines the outer approximation technique and the cutting plane method. Basicallyp(≤n …”
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  17. 17

    Parallel fault diagnosis using hierarchical fuzzy Petri net by reversible and dynamic decomposition mechanism von Sarkheyli-Hägele, Arezoo, Yusoff, Yusliza, Zain, Azlan Mohd

    ISSN: 2095-9184, 2095-9230
    Veröffentlicht: Hangzhou Zhejiang University Press 01.01.2025
    “… To address the state explosion issue, this work introduces a parallel bidirectional reasoning algorithm for an FPN that utilizes reverse and decomposition strategies to optimize the implementation process …”
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  18. 18

    The error analysis of the reverse saturation current of the diode in the modeling of photovoltaic modules von Wang, Gang, Zhao, Ke, Qiu, Tian, Yang, Xinsheng, Zhang, Yong, Zhao, Yong

    ISSN: 0360-5442
    Veröffentlicht: Elsevier Ltd 15.11.2016
    Veröffentlicht in Energy (Oxford) (15.11.2016)
    “… We analyzed the errors at the open circuit point, and proposed an iterative algorithm to calculate the modified values of the reverse saturation current, series resistance and parallel resistance …”
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  19. 19

    Application of Parallel Signal Processing Using Reverse Blockchain Technology in Conditions of Network Instability von Khilenko, Volodymyr, Zinchenko, Andrii, Stepanov, Oleksii, Kotuliak, Ivan, Ries, Michal

    Veröffentlicht: IEEE 04.11.2024
    “… The theses is in line with works aimed at studying the possibility of using mathematical algorithms for parallel processing of information in reverse blockchain technology …”
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  20. 20

    Learning Force Field Parameters from Differentiable Particle-Field Molecular Dynamics von Carrer, Manuel, Cezar, Henrique Musseli, Bore, Sigbjørn Løland, Ledum, Morten, Cascella, Michele

    ISSN: 1549-960X, 1549-960X
    Veröffentlicht: United States 22.07.2024
    Veröffentlicht in Journal of chemical information and modeling (22.07.2024)
    “… ∂-HyMD exploits an embarrassingly parallel optimization algorithm by spawning independent simulations, whose trajectories are simultaneously processed by reverse mode automatic differentiation …”
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