Suchergebnisse - (( python interfaces cs reference format ) OR ( python interfaces _ reference format ))

  1. 1

    SBML2HYB: a Python interface for SBML compatible hybrid modeling von Pinto, José, Costa, Rafael S, Alexandre, Leonardo, Ramos, João, Oliveira, Rui

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Veröffentlicht: England Oxford University Press 01.01.2023
    Veröffentlicht in Bioinformatics (Oxford, England) (01.01.2023)
    “… The tool supports a user-friendly export interface with an internal format validator. Two case studies illustrate the use of the sbml2hyb tool …”
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  2. 2

    imzML Writer: An Easy-to-Use Python Pipeline for Conversion of Continuously Acquired Raw Mass Spectrometry Imaging Data to imzML Format von Monaghan, Joseph, Nguyen, Kiera, Woytowich, Nicholas, Keyowski, Alora, Duncan, Kyle D

    ISSN: 1520-6882, 1520-6882
    Veröffentlicht: United States 25.03.2025
    Veröffentlicht in Analytical chemistry (Washington) (25.03.2025)
    “… ). Here, we present imzML Writer, an easy-to-use Python application with a graphical …”
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  3. 3

    Sensortoolkit—A Python Library for Standardizing the Ingestion, Analysis, and Reporting of Air Sensor Data for Performance Evaluation von Kumar, Menaka, Frederick, Samuel G., Barkjohn, Karoline K., Clements, Andrea L.

    ISSN: 1424-8220, 1424-8220
    Veröffentlicht: Switzerland MDPI AG 10.09.2025
    Veröffentlicht in Sensors (Basel, Switzerland) (10.09.2025)
    “… The library compares the collocated air sensor against reference monitor data and includes procedures to reformat both datasets into a standardized format using an interactive setup module …”
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  4. 4

    pyM2aia: Python interface for mass spectrometry imaging with focus on deep learning von Cordes, Jonas, Enzlein, Thomas, Hopf, Carsten, Wolf, Ivo

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Veröffentlicht: England Oxford University Press 04.03.2024
    Veröffentlicht in Bioinformatics (Oxford, England) (04.03.2024)
    “… pyM2aia provides interfaces to its parent application M2aia, which offers interactive capabilities for exploring and annotating MSI data in imzML format …”
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  5. 5

    A fast and efficient python library for interfacing with the Biological Magnetic Resonance Data Bank von Smelter, Andrey, Astra, Morgan, Moseley, Hunter N. B.

    ISSN: 1471-2105, 1471-2105
    Veröffentlicht: London BioMed Central 17.03.2017
    Veröffentlicht in BMC bioinformatics (17.03.2017)
    “… s. It is primarily maintained and accessed in a flat file ASCII format known as NMR-STAR. While the format is human readable, the size of most BMRB entries makes computer …”
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  6. 6

    Gene count estimation with pytximport enables reproducible analysis of bulk RNA sequencing data in Python von Kuehl, Malte, Wong, Milagros N, Wanner, Nicola, Bonn, Stefan, Puelles, Victor G

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Veröffentlicht: England Oxford University Press 28.11.2024
    Veröffentlicht in Bioinformatics (Oxford, England) (28.11.2024)
    “… Here we present pytximport, a Python implementation of the tximport R package that supports a variety of input formats, different modes of bias correction, inferential replicates, gene-level …”
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  7. 7

    Bite-Size Python: An Introduction to Python Programming von Speight, April

    ISBN: 9781119643814, 1119643813
    Veröffentlicht: Newark John Wiley & Sons, Incorporated 2020
    “… ! Python has now surpassed Java as the most commonly used programming language. As the language rises in popularity, this complete guide can teach basic Python concepts to kids with its simple, friendly format. Bite-Size Python …”
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    E-Book
  8. 8

    Python for MATLAB Development - Extend MATLAB with 300,000+ Modules from the Python Package Index von Danial, Albert

    ISBN: 9781484272220, 1484272226, 1484272234, 9781484272237
    Veröffentlicht: Berkeley, CA Apress, an imprint of Springer Nature 2022
    “… A reference guide to setting up and managing a Python environment that integrates cleanly with MATLAB …”
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  9. 9

    A Python library for FAIRer access and deposition to the Metabolomics Workbench Data Repository von Smelter, Andrey, Moseley, Hunter N. B.

    ISSN: 1573-3882, 1573-3890
    Veröffentlicht: New York Springer US 01.05.2018
    Veröffentlicht in Metabolomics (01.05.2018)
    “… The data and metadata for each study is deposited, stored, and accessed via files in the domain-specific ‘mwTab’ flat file format …”
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  10. 10

    pvlib iotools—Open-source Python functions for seamless access to solar irradiance data von Jensen, Adam R., Anderson, Kevin S., Holmgren, William F., Mikofski, Mark A., Hansen, Clifford W., Boeman, Leland J., Loonen, Roel

    ISSN: 0038-092X, 1471-1257
    Veröffentlicht: United States Elsevier Ltd 01.12.2023
    Veröffentlicht in Solar energy (01.12.2023)
    “… However, lack of standardization in data formats and access interfaces across providers constitutes a major barrier to entry for new users. pvlib …”
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  11. 11

    QuTiP 2: A Python framework for the dynamics of open quantum systems von Johansson, J.R., Nation, P.D., Nori, Franco

    ISSN: 0010-4655, 1879-2944
    Veröffentlicht: Elsevier B.V 01.04.2013
    Veröffentlicht in Computer physics communications (01.04.2013)
    “… We present version 2 of QuTiP, the Quantum Toolbox in Python. Compared to the preceding version [J.R. Johansson, P.D. Nation, F. Nori, Comput. Phys. Commun. 183 (2012) 1760 …”
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  12. 12

    Free Analysis and Visualization Programs for Electrochemical Impedance Spectroscopy Coded in Python von SUZUKI, Tohru S., KOBAYASHI, Kiyoshi

    ISSN: 1344-3542, 2186-2451
    Veröffentlicht: Tokyo The Electrochemical Society of Japan 05.03.2021
    Veröffentlicht in Denki kagaku oyobi kōgyō butsuri kagaku (05.03.2021)
    “… New programs for fitting using an equivalent circuit model and data visualization of electrochemical impedance spectroscopy were developed using Python and its open-source libraries …”
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  13. 13

    Data Science Fundamentals with R, Python, and Open Data von Cremonini, Marco

    ISBN: 9781394213245, 1394213247
    Veröffentlicht: Hoboken, New Jersey John Wiley & Sons 2024
    “… Introduction to essential concepts and techniques of the fundamentals of R and Python needed to start data science projectsOrganized with a strong focus on open data, This book discusses concepts …”
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  14. 14

    Python Machine Learning von Lee, Wei-Meng

    ISBN: 1119545633, 9781119545637
    Veröffentlicht: Newark John Wiley & Sons, Incorporated 2019
    “… Python makes machine learning easy for beginners and experienced developers With computing power increasing exponentially and costs decreasing at the same time, there is no better time to learn …”
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    AMEP: The active matter evaluation package for Python von Hecht, Lukas, Dormann, Kay-Robert, Spanheimer, Kai Luca, Ebrahimi, Mahdieh, Cordts, Malte, Mandal, Suvendu, Mukhopadhyay, Aritra K., Liebchen, Benno

    ISSN: 0010-4655
    Veröffentlicht: Elsevier B.V 01.04.2025
    Veröffentlicht in Computer physics communications (01.04.2025)
    “… The Active Matter Evaluation Package (AMEP) is a Python library for analyzing simulation data of particle-based and continuum simulations …”
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    Generative AI with Python and PyTorch - Navigating the AI Frontier with LLMs, Stable Diffusion, and Next‑Gen AI Applications (2nd Edition) von Babcock Joseph, Bali Raghav

    ISBN: 9781835884447, 183588444X
    Veröffentlicht: Packt Publishing 2025
    “… ) and computer vision. Generative AI with Python and PyTorch is your end-to-end guide to creating advanced AI applications, made easy by Raghav Bali, a seasoned data scientist with multiple patents in AI, and Joseph …”
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    VariantValidator: Accurate validation, mapping, and formatting of sequence variation descriptions von Freeman, Peter J., Hart, Reece K., Gretton, Liam J., Brookes, Anthony J., Dalgleish, Raymond

    ISSN: 1059-7794, 1098-1004, 1098-1004
    Veröffentlicht: United States John Wiley & Sons, Inc 01.01.2018
    Veröffentlicht in Human mutation (01.01.2018)
    “… ‐source hgvs Python package (https://github.com/biocommons/hgvs) provides a programmatic interface for parsing, manipulating, formatting, and validating of variants according to the HGVS recommendations, but does not provide a user …”
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    FragHub: A Mass Spectral Library Data Integration Workflow von Dablanc, Axel, Hennechart, Solweig, Perez, Amélie, Cabanac, Guillaume, Guitton, Yann, Paulhe, Nils, Lyan, Bernard, Jamin, Emilien L, Giacomoni, Franck, Marti, Guillaume

    ISSN: 1520-6882, 1520-6882
    Veröffentlicht: United States 19.07.2024
    Veröffentlicht in Analytical chemistry (Washington) (19.07.2024)
    “… Despite their importance, the practical application of OMSLs is hampered by the lack of standardized file formats, metadata fields, and supporting ontology …”
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    PyPore: a python toolbox for nanopore sequencing data handling von Semeraro, Roberto, Magi, Alberto

    ISSN: 1367-4803, 1367-4811, 1460-2059, 1367-4811
    Veröffentlicht: England Oxford University Press 01.11.2019
    Veröffentlicht in Bioinformatics (01.11.2019)
    “… Results We developed PyPore, a three module python toolbox designed to handle raw FAST5 files from quality checking to alignment to a reference genome and to explore their features …”
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    jmzTab-M: A Reference Parser, Writer, and Validator for the Proteomics Standards Initiative mzTab 2.0 Metabolomics Standard von Hoffmann, Nils, Hartler, Jürgen, Ahrends, Robert

    ISSN: 1520-6882, 1520-6882
    Veröffentlicht: United States 15.10.2019
    Veröffentlicht in Analytical chemistry (Washington) (15.10.2019)
    “… mzTab 2.0 for metabolomics (mzTab-M) is the most recent standard format developed in collaboration by the Proteomics and Metabolomics Standards Initiatives including contributions by the recently founded Lipidomics Standards Initiative …”
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