Suchergebnisse - (( (statu OR state) python code analysis ) OR ( (statement OR state:mn) python code analysis ))
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Combining Astrometry and Elemental Abundances: The Case of the Candidate Pre-Gaia Halo Moving Groups G03-37, G18-39, and G21-22
ISSN: 0004-6256, 1538-3881, 1538-3881Veröffentlicht: Madison IOP Publishing 01.09.2021Veröffentlicht in The Astronomical journal (01.09.2021)“… Using a new Python code that uses a Bayesian method to self …”
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Minimizing the number of optimizations for efficient community dynamic flux balance analysis
ISSN: 1553-7358, 1553-734X, 1553-7358Veröffentlicht: San Francisco Public Library of Science 29.09.2020Veröffentlicht in PLoS computational biology (29.09.2020)“… Dynamic flux balance analysis uses a quasi-steady state assumption to calculate an organism's metabolic activity at each time-step of a dynamic simulation, using the well-known technique of flux balance analysis …”
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Vespa: Integrated applications for RF pulse design, spectral simulation and MRS data analysis
ISSN: 0740-3194, 1522-2594, 1522-2594Veröffentlicht: United States Wiley Subscription Services, Inc 01.09.2023Veröffentlicht in Magnetic resonance in medicine (01.09.2023)“… Purpose The Vespa package (Versatile Simulation, Pulses, and Analysis) is described and demonstrated …”
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GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
ISSN: 1367-4811, 1367-4803, 1367-4811Veröffentlicht: England Oxford University Press 01.01.2023Veröffentlicht in Bioinformatics (Oxford, England) (01.01.2023)“… Abstract Motivation Gene set enrichment analysis (GSEA) is a commonly used algorithm for characterizing gene expression changes …”
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VULCAN: An Open-source, Validated Chemical Kinetics Python Code for Exoplanetary Atmospheres
ISSN: 0067-0049, 1538-4365Veröffentlicht: United States The American Astronomical Society 01.02.2017Veröffentlicht in The Astrophysical journal. Supplement series (01.02.2017)“… We present an open-source and validated chemical kinetics code for studying hot exoplanetary atmospheres, which we name VULCAN …”
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CpGtools: a python package for DNA methylation analysis
ISSN: 1367-4803, 1367-4811, 1367-4811Veröffentlicht: England Oxford University Press 12.07.2021Veröffentlicht in Bioinformatics (Oxford, England) (12.07.2021)“… Abstract Motivation DNA methylation can be measured at the single CpG level using sodium bisulfite conversion of genomic DNA followed by sequencing or array …”
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MechElastic: A Python library for analysis of mechanical and elastic properties of bulk and 2D materials
ISSN: 0010-4655, 1879-2944Veröffentlicht: United States Elsevier B.V 01.10.2021Veröffentlicht in Computer physics communications (01.10.2021)“… The MechElastic Python package evaluates the mechanical and elastic properties of bulk and 2D materials using the elastic coefficient matrix (Cij …”
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scFates: a scalable python package for advanced pseudotime and bifurcation analysis from single-cell data
ISSN: 1367-4811, 1367-4803, 1367-4811Veröffentlicht: England Oxford University Press 01.01.2023Veröffentlicht in Bioinformatics (Oxford, England) (01.01.2023)“… Abstract Summary scFates provides an extensive toolset for the analysis of dynamic trajectories comprising tree learning, feature association testing, branch differential expression and with a …”
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The Design of SimpleITK
ISSN: 1662-5196, 1662-5196Veröffentlicht: Switzerland Frontiers Research Foundation 30.12.2013Veröffentlicht in Frontiers in neuroinformatics (30.12.2013)“… Initially, ITK provided a direct wrapping interface to languages such as Python and Tcl through the WrapITK system …”
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pyIAST: Ideal adsorbed solution theory (IAST) Python package
ISSN: 0010-4655, 1879-2944Veröffentlicht: Netherlands Elsevier B.V 01.03.2016Veröffentlicht in Computer physics communications (01.03.2016)“… We present an open-source, user-friendly Python package, pyIAST, to perform IAST calculations for an arbitrary number of components …”
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PHOTONAI—A Python API for rapid machine learning model development
ISSN: 1932-6203, 1932-6203Veröffentlicht: San Francisco Public Library of Science 21.07.2021Veröffentlicht in PloS one (21.07.2021)“… PHOTONAI is a high-level Python API designed to simplify and accelerate machine learning model development …”
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pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
ISSN: 1471-2105, 1471-2105Veröffentlicht: London BioMed Central 07.12.2023Veröffentlicht in BMC bioinformatics (07.12.2023)“… Results In this technical note, we present a new Python implementation of ComBat and ComBat-Seq …”
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stk: A python toolkit for supramolecular assembly
ISSN: 0192-8651, 1096-987X, 1096-987XVeröffentlicht: Hoboken, USA John Wiley & Sons, Inc 05.09.2018Veröffentlicht in Journal of computational chemistry (05.09.2018)“… stk is a modular, extensible and open‐source Python library that provides a simple Python API and integration with third party computational codes …”
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SciPy 1.0: fundamental algorithms for scientific computing in Python
ISSN: 1548-7091, 1548-7105, 1548-7105Veröffentlicht: New York Nature Publishing Group US 01.03.2020Veröffentlicht in Nature methods (01.03.2020)“… Since its initial release in 2001, SciPy has become a de facto standard for leveraging scientific algorithms in Python, with over 600 unique code contributors, thousands of dependent packages …”
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PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
ISSN: 1932-6203, 1932-6203Veröffentlicht: United States Public Library of Science 06.08.2025Veröffentlicht in PloS one (06.08.2025)“… PyNoetic is one of the very few frameworks in Python that encompasses the entire BCI design pipeline, from stimulus presentation and data …”
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Quasiclassical sampling and Wigner sampling of initial vibrational coordinates and momenta for polyatomic molecules in Monte Carlo molecular dynamics simulations
ISSN: 0026-8976, 1362-3028Veröffentlicht: Abingdon Taylor & Francis 18.10.2025Veröffentlicht in Molecular physics (18.10.2025)“… molecules, namely, fixed-energy vibrational-state-selected initial conditions and thermal initial conditions …”
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Snakes on a Spaceship - An Overview of Python in Heliophysics
ISSN: 2169-9380, 2169-9402Veröffentlicht: Goddard Space Flight Center AGU - American Geophysical Union 01.12.2018Veröffentlicht in Journal of geophysical research : Space physics (2013 - Present) (01.12.2018)“… Computational analysis has become ubiquitous within the heliophysics community. However, community standards for peer review of codes and analysis have lagged behind these developments …”
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GPAW: An open Python package for electronic structure calculations
ISSN: 1089-7690Veröffentlicht: United States 07.03.2024Veröffentlicht in The Journal of chemical physics (07.03.2024)“… We review the GPAW open-source Python package for electronic structure calculations …”
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Python code smells detection using conventional machine learning models
ISSN: 2376-5992, 2376-5992Veröffentlicht: United States PeerJ. Ltd 29.05.2023Veröffentlicht in PeerJ. Computer science (29.05.2023)“… This article proposes a Python code smell dataset for Large Class and Long Method code smells …”
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CRYSTALpytools: A Python infrastructure for the Crystal code
ISSN: 0010-4655, 1879-2944Veröffentlicht: Elsevier B.V 01.11.2023Veröffentlicht in Computer physics communications (01.11.2023)“… CRYSTALpytools is an open source Python project available on GitHub that implements a user-friendly interface to the Crystal code for quantum-mechanical condensed matter simulations …”
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