Výsledky vyhledávání - jana AND python source code

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  1. 1

    Guide assignment in single-cell CRISPR screens using crispat Autor Braunger, Jana M, Velten, Britta

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Vydáno: England Oxford University Press 02.09.2024
    Vydáno v Bioinformatics (Oxford, England) (02.09.2024)
    “… To address this, we here propose crispat (CRISPR guide assignment tool), a Python package to facilitate the choice of a suitable guide assignment strategy for single-cell CRISPR screens…”
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    Journal Article
  2. 2

    Marginalizing Sample Consensus Autor Barath, Daniel, Noskova, Jana, Matas, Jiri

    ISSN: 0162-8828, 1939-3539, 2160-9292, 1939-3539
    Vydáno: New York IEEE 01.11.2022
    “…A new method for robust estimation, MAGSAC++, is proposed. It introduces a new model quality (scoring) function that does not make inlier-outlier decisions,…”
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    Journal Article
  3. 3

    deepFPlearn +: enhancing toxicity prediction across the chemical universe using graph neural networks Autor Soulios, Kyriakos, Scheibe, Patrick, Bernt, Matthias, Hackermüller, Jörg, Schor, Jana

    ISSN: 1367-4811, 1367-4803, 1367-4811
    Vydáno: England Oxford University Press 01.12.2023
    Vydáno v Bioinformatics (Oxford, England) (01.12.2023)
    “…Abstract Summary Sophisticated approaches for the in silico prediction of toxicity are required to support the risk assessment of chemicals. The number of…”
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    Journal Article
  4. 4

    decoupleR: ensemble of computational methods to infer biological activities from omics data Autor Badia-i-Mompel, Pau, Vélez Santiago, Jesús, Braunger, Jana, Geiss, Celina, Dimitrov, Daniel, Müller-Dott, Sophia, Taus, Petr, Dugourd, Aurelien, Holland, Christian H, Ramirez Flores, Ricardo O, Saez-Rodriguez, Julio

    ISSN: 2635-0041, 2635-0041
    Vydáno: England Oxford University Press 2022
    Vydáno v Bioinformatics advances (2022)
    “… Here, we present decoupleR, a Bioconductor and Python package containing computational methods to extract these activities within a unified framework…”
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    Journal Article
  5. 5

    Open-Source Web Service with Morphological Dictionary-Supplemented Deep Learning for Morphosyntactic Analysis of Czech Autor Straka, Milan, Straková, Jana

    ISSN: 2331-8422
    Vydáno: Ithaca Cornell University Library, arXiv.org 17.09.2024
    Vydáno v arXiv.org (17.09.2024)
    “…We present an open-source web service for Czech morphosyntactic analysis. The system combines a deep learning model with rescoring by a high-precision morphological dictionary at inference time…”
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    Paper
  6. 6

    Guide assignment in single-cell CRISPR screens using crispat Autor Braunger, Jana M., Velten, Britta

    ISSN: 2692-8205
    Vydáno: Cold Spring Harbor Laboratory 29.07.2024
    Vydáno v bioRxiv (29.07.2024)
    “… To address this, we here propose crispat (CRISPR guide assignment tool), a Python package to facilitate the choice of a suitable guide assignment strategy for single cell CRISPR screens…”
    Získat plný text
    Paper