Výsledky vyhledávání - (( state:mi python code analysis ) OR ( (stat OR state) python code analysis ))*

SNPAAMapper-Python: A highly efficient genome-wide SNP variant analysis pipeline for Next-Generation Sequencing data Autor Li, Chang, Ma, Kevin, Xu, Nicole, Fu, Chenjian, He, Andrew, Liu, Xiaoming, Bai, Yongsheng

“… In this study, we updated SNPAAMapper, a variant annotation pipeline by converting perl codes to python for generating annotation output with an improved computational efficiency and updated…”
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Percolation theory using Python Autor Malthe-Sørenssen, Anders

“… Readers will learn how to generate, analyze, and comprehend data and models, with detailed theoretical discussions complemented by accessible computer codes…”
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A NICER View of the Massive Pulsar PSR J0740+6620 Informed by Radio Timing and XMM-Newton Spectroscopy Autor Riley, Thomas E., Watts, Anna L., Ray, Paul S., Bogdanov, Slavko, Guillot, Sebastien, Morsink, Sharon M., Bilous, Anna V., Arzoumanian, Zaven, Choudhury, Devarshi, Deneva, Julia S., Gendreau, Keith C., Harding, Alice K., Ho, Wynn C. G., Lattimer, James M., Loewenstein, Michael, Ludlam, Renee M., Markwardt, Craig B., Okajima, Takashi, Prescod-Weinstein, Chanda, Remillard, Ronald A., Wolff, Michael T., Fonseca, Emmanuel, Cromartie, H. Thankful, Kerr, Matthew, Pennucci, Timothy T., Parthasarathy, Aditya, Ransom, Scott, Stairs, Ingrid, Guillemot, Lucas, Cognard, Ismael

“…We report on Bayesian estimation of the radius, mass, and hot surface regions of the massive millisecond pulsar PSR J0740+6620, conditional on pulse-profile…”
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Potku – New analysis software for heavy ion elastic recoil detection analysis Autor Arstila, K., Julin, J., Laitinen, M.I., Aalto, J., Konu, T., Kärkkäinen, S., Rahkonen, S., Raunio, M., Itkonen, J., Santanen, J.-P., Tuovinen, T., Sajavaara, T.

“… The software combines a Python-language graphical front-end with a C code computing back-end in a user-friendly way…”
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Decoding the JAK-STAT Axis in Colorectal Cancer with AI-HOPE-JAK-STAT: A Conversational Artificial Intelligence Approach to Clinical–Genomic Integration Autor Yang, Ei-Wen, Waldrup, Brigette, Velazquez-Villarreal, Enrique

“…: AI-HOPE-JAK-STAT combines large language models (LLMs), a natural language-to-code engine, and harmonized public CRC datasets from cBioPortal…”
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PyIOmica: longitudinal omics analysis and trend identification Autor Domanskyi, Sergii, Piermarocchi, Carlo, Mias, George I

“…Abstract Summary PyIOmica is an open-source Python package focusing on integrating longitudinal multiple omics datasets, characterizing and categorizing temporal trends…”
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Introduction to computational causal inference using reproducible Stata, R, and Python code: A tutorial Autor Smith, Matthew J., Mansournia, Mohammad A., Maringe, Camille, Zivich, Paul N., Cole, Stephen R., Leyrat, Clémence, Belot, Aurélien, Rachet, Bernard, Luque‐Fernandez, Miguel A.

“…The main purpose of many medical studies is to estimate the effects of a treatment or exposure on an outcome. However, it is not always possible to randomize…”
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LiPydomics: A Python Package for Comprehensive Prediction of Lipid Collision Cross Sections and Retention Times and Analysis of Ion Mobility-Mass Spectrometry-Based Lipidomics Data Autor Ross, Dylan H, Cho, Jang Ho, Zhang, Rutan, Hines, Kelly M, Xu, Libin

“… Existing solutions for these data analysis challenges (i.e., multivariate statistics and lipid identification…”
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Identification of Novel Microcystins Using High-Resolution MS and MSn with Python Code Autor Baliu-Rodriguez, David, Peraino, Nicholas J, Premathilaka, Sanduni H, Birbeck, Johnna A, Baliu-Rodriguez, Tomás, Westrick, Judy A, Isailovic, Dragan

“…Cyanotoxins called microcystins (MCs) are highly toxic and can be present in drinking water sources. Determining the structure of MCs is paramount because of…”
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Using DeepLabCut for 3D markerless pose estimation across species and behaviors Autor Nath, Tanmay, Mathis, Alexander, Chen, An Chi, Patel, Amir, Bethge, Matthias, Mathis, Mackenzie Weygandt

“… We recently introduced an open-source toolbox called DeepLabCut that builds on a state-of-the-art human pose-estimation algorithm to allow a user to train a deep neural network with limited training…”
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Is Multitask Deep Learning Practical for Pharma? Autor Ramsundar, Bharath, Liu, Bowen, Wu, Zhenqin, Verras, Andreas, Tudor, Matthew, Sheridan, Robert P, Pande, Vijay

“… Our implementation enables simple python scripts to construct, fit, and evaluate sophisticated deep models…”
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Enhanced deep learning model for precise nodule localization and recurrence risk prediction following curative-intent surgery for lung cancer Autor Park, Jihwan, Rho, Mi Jung, Moon, Mi Hyoung

“…Radical surgery is the primary treatment for early-stage resectable lung cancer, yet recurrence after curative surgery is not uncommon. Identifying patients at…”
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Statistics Using Python Autor Campesato, Oswald

“…This book is designed to offer a fast-paced yet thorough introduction to essential statistical concepts using Python code samples, and aims to assist data scientists in their daily endeavors…”
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Nature and Diffusion of Gynecologic Cancer–Related Misinformation on Social Media: Analysis of Tweets Autor Chen, Liang, Wang, Xiaohui, Peng, Tai-Quan

“…Over the last two decades, the incidence and mortality rates of gynecologic cancers have increased at a constant rate in China. Gynecologic cancers have become…”
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PyLAT: Python LAMMPS Analysis Tools Autor Humbert, Michael T, Zhang, Yong, Maginn, Edward J

“… Here we describe a suite of open-source Python-based postprocessing routines we have developed called PyLAT…”
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GSEApy: a comprehensive package for performing gene set enrichment analysis in Python Autor Fang, Zhuoqing, Liu, Xinyuan, Peltz, Gary

“…Abstract Motivation Gene set enrichment analysis (GSEA) is a commonly used algorithm for characterizing gene expression changes…”
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Pyteomics—a Python Framework for Exploratory Data Analysis and Rapid Software Prototyping in Proteomics Autor Goloborodko, Anton A., Levitsky, Lev I., Ivanov, Mark V., Gorshkov, Mikhail V.

“…Pyteomics is a cross-platform, open-source Python library providing a rich set of tools for MS-based proteomics…”
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VULCAN: An Open-source, Validated Chemical Kinetics Python Code for Exoplanetary Atmospheres Autor Tsai, Shang-Min, Lyons, James R., Grosheintz, Luc, Rimmer, Paul B., Kitzmann, Daniel, Heng, Kevin

“…We present an open-source and validated chemical kinetics code for studying hot exoplanetary atmospheres, which we name VULCAN…”
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From code to reliability: Python-powered Paraconsistent Logic for alarm detection in the power gris/ Do codigo a confiabilidade: Logica Paraconsistente impulsionada por Python para a deteccao de alarmes na rede de energia Autor de Oliveira, Joseffe Barroso, Gino, Joao Vitor Santa Rosa, de Lima, Carlos Jose, Filho, Joao Inacio da Silva

“… This application enables the comparison of triggered alarms with the resultant logical states obtained during the analysis…”
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PypKa: A Flexible Python Module for Poisson-Boltzmann-Based pKa Calculations Autor Reis, Pedro B P S, Vila-Viçosa, Diogo, Rocchia, Walter, Machuqueiro, Miguel

“…The protonation of titratable residues has a significant impact on the structure and function of biomolecules, influencing many physicochemical and ADME…”
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