Výsledky vyhledávání - (( (stavebna OR stat) python code analysis ) OR ( state:ny python code analysis ))~

Decoding the JAK-STAT Axis in Colorectal Cancer with AI-HOPE-JAK-STAT: A Conversational Artificial Intelligence Approach to Clinical–Genomic Integration Autor Yang, Ei-Wen, Waldrup, Brigette, Velazquez-Villarreal, Enrique

“…: AI-HOPE-JAK-STAT combines large language models (LLMs), a natural language-to-code engine, and harmonized public CRC datasets from cBioPortal…”
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Introduction to computational causal inference using reproducible Stata, R, and Python code: A tutorial Autor Smith, Matthew J., Mansournia, Mohammad A., Maringe, Camille, Zivich, Paul N., Cole, Stephen R., Leyrat, Clémence, Belot, Aurélien, Rachet, Bernard, Luque‐Fernandez, Miguel A.

“…The main purpose of many medical studies is to estimate the effects of a treatment or exposure on an outcome. However, it is not always possible to randomize…”
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LiPydomics: A Python Package for Comprehensive Prediction of Lipid Collision Cross Sections and Retention Times and Analysis of Ion Mobility-Mass Spectrometry-Based Lipidomics Data Autor Ross, Dylan H, Cho, Jang Ho, Zhang, Rutan, Hines, Kelly M, Xu, Libin

“… Existing solutions for these data analysis challenges (i.e., multivariate statistics and lipid identification…”
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Percolation theory using Python Autor Malthe-Sørenssen, Anders

“… Readers will learn how to generate, analyze, and comprehend data and models, with detailed theoretical discussions complemented by accessible computer codes…”
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Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors Autor Peng, Yun, Gao, Shuzheng, Gao, Cuiyun, Huo, Yintong, Lyu, Michael R.

“…As a dynamic programming language, Python has become increasingly popular in recent years…”
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Discovering Repetitive Code Changes in Python ML Systems Autor Dilhara, Malinda, Ketkar, Ameya, Sannidhi, Nikhith, Dig, Danny

“… Despite the extraordinary rise in popularity of Python-based ML systems, they do not benefit from these advances…”
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data Autor Pakkir Shah, Abzer K., Walter, Axel, Ottosson, Filip, Russo, Francesco, Navarro-Diaz, Marcelo, Boldt, Judith, Kalinski, Jarmo-Charles J., Kontou, Eftychia Eva, Elofson, James, Polyzois, Alexandros, González-Marín, Carolina, Farrell, Shane, Aggerbeck, Marie R., Pruksatrakul, Thapanee, Chan, Nathan, Wang, Yunshu, Pöchhacker, Magdalena, Brungs, Corinna, Cámara, Beatriz, Caraballo-Rodríguez, Andrés Mauricio, Cumsille, Andres, de Oliveira, Fernanda, Dührkop, Kai, El Abiead, Yasin, Geibel, Christian, Graves, Lana G., Hansen, Martin, Heuckeroth, Steffen, Knoblauch, Simon, Kostenko, Anastasiia, Kuijpers, Mirte C. M., Mildau, Kevin, Papadopoulos Lambidis, Stilianos, Portal Gomes, Paulo Wender, Schramm, Tilman, Steuer-Lodd, Karoline, Stincone, Paolo, Tayyab, Sibgha, Vitale, Giovanni Andrea, Wagner, Berenike C., Xing, Shipei, Yazzie, Marquis T., Zuffa, Simone, de Kruijff, Martinus, Beemelmanns, Christine, Link, Hannes, Mayer, Christoph, van der Hooft, Justin J. J., Damiani, Tito, Pluskal, Tomáš, Dorrestein, Pieter, Stanstrup, Jan, Schmid, Robin, Wang, Mingxun, Aron, Allegra, Ernst, Madeleine, Petras, Daniel

“… We provide explanations and code in two scripting languages (R and Python) as well…”
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From code to reliability: Python-powered Paraconsistent Logic for alarm detection in the power gris/ Do codigo a confiabilidade: Logica Paraconsistente impulsionada por Python para a deteccao de alarmes na rede de energia Autor de Oliveira, Joseffe Barroso, Gino, Joao Vitor Santa Rosa, de Lima, Carlos Jose, Filho, Joao Inacio da Silva

“… This application enables the comparison of triggered alarms with the resultant logical states obtained during the analysis…”
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PyTy: Repairing Static Type Errors in Python Autor Chow, Yiu Wai, Di Grazia, Luca, Pradel, Michael

“… As more and more code bases get type-annotated, static type checkers detect an increasingly large number of type errors…”
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A Python Instrument Control and Data Acquisition Suite for Reproducible Research Autor Koerner, Lucas J., Caswell, Thomas A., Allan, Daniel B., Campbell, Stuart I.

“… The National Synchrotron Light Source-II (NSLS-II) has generated an open-source Python data acquisition, management, and analysis software suite that automates X-ray…”
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Bloat beneath Python’s Scales: A Fine-Grained Inter-Project Dependency Analysis Autor Drosos, Georgios-Petros, Sotiropoulos, Thodoris, Spinellis, Diomidis, Mitropoulos, Dimitris

“… In this work, we conduct a large-scale, fine-grained analysis to understand bloated dependency code in the PyPI ecosystem…”
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Nestedness for Dummies (NeD): A user friendly web interface for exploratory nestedness analysis Autor Strona, Giovanni, Galli, Paolo, Seveso, Davide, Montano, Simone, Fattorini, Simone

“…Recent theoretical advances in nestedness analysis have led to the introduction of several alternative metrics to overcome most of the problems biasing the use of matrix 'temperature' calculated…”
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SpotFlow: Tracking Method Calls and States at Runtime Autor Hora, Andre

“… In this paper, we propose SpotFlow, a tool to ease the runtime analysis of Python programs. With Spot-Flow, practitioners and researchers can easily extract information…”
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CoverUp: Effective High Coverage Test Generation for Python Autor Altmayer Pizzorno, Juan, Berger, Emery D.

“… We evaluate our prototype CoverUp implementation across a benchmark of challenging code derived from open-source Python projects and show that CoverUp substantially improves on the state of the art…”
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SNPAAMapper-Python: A highly efficient genome-wide SNP variant analysis pipeline for Next-Generation Sequencing data Autor Li, Chang, Ma, Kevin, Xu, Nicole, Fu, Chenjian, He, Andrew, Liu, Xiaoming, Bai, Yongsheng

“… In this study, we updated SNPAAMapper, a variant annotation pipeline by converting perl codes to python for generating annotation output with an improved computational efficiency and updated…”
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Statistical Analyses and Reproducible Research Autor Gentleman, Robert, Temple Lang, Duncan

“…It is important, if not essential, to integrate the computations and code used in data analyses, methodological descriptions, simulations, and so on with the documents that describe and rely…”
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Facilitating the Calculation of the Efficient Score Using Symbolic Computing Autor B. Sibley, Alexander, Li, Zhiguo, Jiang, Yu, Li, Yi-Ju, Chan, Cliburn, Allen, Andrew, Owzar, Kouros

“… In the analysis of data from high-throughput genomic assays, inference on the basis of the score usually enjoys greater stability, considerably higher computational efficiency, and lends itself…”
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Generation of Scale-Free Assortative Networks via Newman Rewiring for Simulation of Diffusion Phenomena Autor Di Lucchio, Laura, Modanese, Giovanni

“…By collecting and expanding several numerical recipes developed in previous work, we implement an object-oriented Python code, based on the networkX library, for the realization of the configuration…”
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Restoring Reproducibility of Jupyter Notebooks Autor Wang, Jiawei, Kuo, Tzu-yang, Li, Li, Zeller, Andreas

“…Jupyter notebooks-documents that contain live code, equations, visualizations, and narrative text-now are among the most popular means to compute, present, discuss and disseminate scientific findings…”
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Lost in Translation: A Study of Bugs Introduced by Large Language Models While Translating Code Autor Pan, Rangeet, Ibrahimzada, Ali Reza, Krishna, Rahul, Sankar, Divya, Wassi, Lambert Pougeum, Merler, Michele, Sobolev, Boris, Pavuluri, Raju, Sinha, Saurabh, Jabbarvand, Reyhaneh

“… The prerequisite for advancing the state of LLM-based code translation is to understand their promises and limitations over existing techniques…”
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