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Additional file 1 of Chromosome-scale scaffolds of the fungus gnat genome reveal multi-Mb-scale chromosome-folding interactions, centromeric enrichments of retrotransposons, and candidate telomere sequences

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Title: Additional file 1 of Chromosome-scale scaffolds of the fungus gnat genome reveal multi-Mb-scale chromosome-folding interactions, centromeric enrichments of retrotransposons, and candidate telomere sequences
Authors: John M. Urban, Susan A. Gerbi, Allan C. Spradling
Publication Year: 2025
Subject Terms: Genetics, Bradysia coprophila, Sciara coprophila, Fungus gnats, Lower Dipteran insect, Chromosome-scale genome assembly, Chromosomes, Telomeres, Long-range interactions, Horizontal gene transfer, Hi-C
Description: Supplementary Material 1.
Document Type: article in journal/newspaper
Language: unknown
DOI: 10.6084/m9.figshare.28935431.v2
Availability: https://doi.org/10.6084/m9.figshare.28935431.v2
https://figshare.com/articles/journal_contribution/Additional_file_1_of_Chromosome-scale_scaffolds_of_the_fungus_gnat_genome_reveal_multi-Mb-scale_chromosome-folding_interactions_centromeric_enrichments_of_retrotransposons_and_candidate_telomere_sequences/28935431
Rights: CC BY
Accession Number: edsbas.FC610D8B
Database: BASE
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  – Url: https://doi.org/10.6084/m9.figshare.28935431.v2#
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  Data: Additional file 1 of Chromosome-scale scaffolds of the fungus gnat genome reveal multi-Mb-scale chromosome-folding interactions, centromeric enrichments of retrotransposons, and candidate telomere sequences
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  Data: <searchLink fieldCode="AR" term="%22John+M%2E+Urban%22">John M. Urban</searchLink><br /><searchLink fieldCode="AR" term="%22Susan+A%2E+Gerbi%22">Susan A. Gerbi</searchLink><br /><searchLink fieldCode="AR" term="%22Allan+C%2E+Spradling%22">Allan C. Spradling</searchLink>
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  Data: 2025
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  Data: <searchLink fieldCode="DE" term="%22Genetics%22">Genetics</searchLink><br /><searchLink fieldCode="DE" term="%22Bradysia+coprophila%22">Bradysia coprophila</searchLink><br /><searchLink fieldCode="DE" term="%22Sciara+coprophila%22">Sciara coprophila</searchLink><br /><searchLink fieldCode="DE" term="%22Fungus+gnats%22">Fungus gnats</searchLink><br /><searchLink fieldCode="DE" term="%22Lower+Dipteran+insect%22">Lower Dipteran insect</searchLink><br /><searchLink fieldCode="DE" term="%22Chromosome-scale+genome+assembly%22">Chromosome-scale genome assembly</searchLink><br /><searchLink fieldCode="DE" term="%22Chromosomes%22">Chromosomes</searchLink><br /><searchLink fieldCode="DE" term="%22Telomeres%22">Telomeres</searchLink><br /><searchLink fieldCode="DE" term="%22Long-range+interactions%22">Long-range interactions</searchLink><br /><searchLink fieldCode="DE" term="%22Horizontal+gene+transfer%22">Horizontal gene transfer</searchLink><br /><searchLink fieldCode="DE" term="%22Hi-C%22">Hi-C</searchLink>
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  Data: Supplementary Material 1.
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  Data: 10.6084/m9.figshare.28935431.v2
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  Data: https://doi.org/10.6084/m9.figshare.28935431.v2<br />https://figshare.com/articles/journal_contribution/Additional_file_1_of_Chromosome-scale_scaffolds_of_the_fungus_gnat_genome_reveal_multi-Mb-scale_chromosome-folding_interactions_centromeric_enrichments_of_retrotransposons_and_candidate_telomere_sequences/28935431
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        Value: 10.6084/m9.figshare.28935431.v2
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      – Text: unknown
    Subjects:
      – SubjectFull: Genetics
        Type: general
      – SubjectFull: Bradysia coprophila
        Type: general
      – SubjectFull: Sciara coprophila
        Type: general
      – SubjectFull: Fungus gnats
        Type: general
      – SubjectFull: Lower Dipteran insect
        Type: general
      – SubjectFull: Chromosome-scale genome assembly
        Type: general
      – SubjectFull: Chromosomes
        Type: general
      – SubjectFull: Telomeres
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      – SubjectFull: Long-range interactions
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      – SubjectFull: Horizontal gene transfer
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      – SubjectFull: Hi-C
        Type: general
    Titles:
      – TitleFull: Additional file 1 of Chromosome-scale scaffolds of the fungus gnat genome reveal multi-Mb-scale chromosome-folding interactions, centromeric enrichments of retrotransposons, and candidate telomere sequences
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          Name:
            NameFull: John M. Urban
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            NameFull: Susan A. Gerbi
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            NameFull: Allan C. Spradling
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            – D: 01
              M: 01
              Type: published
              Y: 2025
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