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Seawater carbonate chemistry and heterotrophic capacity of Mediterranean corals

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Název: Seawater carbonate chemistry and heterotrophic capacity of Mediterranean corals
Autoři: Hulver, Ann Marie, Carbonne, Chloe, Teixido, Nuria, Comeau, Steeve, Kemp, Dustin W, Keister, Elise F, Gattuso, Jean-Pierre, Grottoli, Andréa G
Informace o vydavateli: PANGAEA
Rok vydání: 2024
Sbírka: PANGAEA - Data Publisher for Earth & Environmental Science (AWI Bremerhaven / MARUM Bremen)
Témata: Alkalinity, total, standard deviation, Animalia, Aragonite saturation state, Astroides calycularis, Benthic animals, Benthos, Bicarbonate ion, Biomass, Biomass/Abundance/Elemental composition, Calcification/Dissolution, Calcification rate, Calcite saturation state, Calculated using seacarb, Calculated using seacarb after Nisumaa et al. (2010), Calculated using seacarb after Orr et al. (2018), Carbohydrates, Carbon, inorganic, dissolved, Carbonate ion, Carbonate system computation flag, Carbon dioxide, Chiane_Ambient, Chiane_Vent, Chlorophyll a, per dry mass, Cladocora caespitosa, Cnidaria
Geografické téma: MEDIAN LATITUDE: 40.712250 * MEDIAN LONGITUDE: 13.960750 * SOUTH-BOUND LATITUDE: 40.701000 * WEST-BOUND LONGITUDE: 13.954000 * NORTH-BOUND LATITUDE: 40.718000 * EAST-BOUND LONGITUDE: 13.965000 * DATE/TIME START: 2019-05-07T00:00:00 * DATE/TIME END: 2019-05-08T00:00:00
Popis: In Ischia, Italy, two species of Mediterranean scleractinian corals–the symbiotic Cladocora caespitosa and the asymbiotic Astroides calycularis–were collected from ambient pH sites (average pHT = 8.05) and adjacent CO2 vent sites (average pHT = 7.8) to evaluate their response to ocean acidification. Coral colonies from both sites were reared in a laboratory setting for six months at present day pH (pHT ~ 8.08) or low pH (pHT ~7.72). We hypothesized that these corals cope with low pH by increasing their heterotrophic capacity (i.e., feeding and/or proportion of heterotrophically derived compounds incorporated in their tissues), irrespective of site of origin, which was quantified indirectly by measuring δ13C, δ15N, and sterols. To further characterize coral health, we quantified energy reserves by measuring biomass, total lipids, and lipid classes. Additional analysis for C. caespitosa included carbohydrates (an energy reserve) and chlorophyll a (an indicator of photosynthetic capacity). This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from supplementary in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-04-11.
Druh dokumentu: dataset
Popis souboru: text/tab-separated-values, 3064 data points
Jazyk: English
Relation: Hulver, Ann Marie; Carbonne, Chloe; Teixido, Nuria; Comeau, Steeve; Kemp, Dustin W; Keister, Elise F; Gattuso, Jean-Pierre; Grottoli, Andréa G (2024): Elevated heterotrophic capacity as a strategy for Mediterranean corals to cope with low pH at CO2 vents. PLoS ONE, 19(7), e0306725, https://doi.org/10.1371/journal.pone.0306725; Carbonne, Chloe; Teixidó, Núria; Moore, B; Mirasole, Alice; Guttierez, Thomas; Gattuso, Jean-Pierre; Comeau, Steeve (2021): Seawater carbonate chemistry and long term calcification, dark respiration, gross photosynthesis, and short-term calcification of two Mediterranean colonial corals Cladocora caespitosa (zooxanthellate) and Astroides calycularis (azooxanthellate) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.943187 (Carbonate chemistry data); Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010; Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html; https://doi.pangaea.de/10.1594/PANGAEA.972429; https://doi.org/10.1594/PANGAEA.972429
DOI: 10.1594/PANGAEA.972429
Dostupnost: https://doi.pangaea.de/10.1594/PANGAEA.972429
https://doi.org/10.1594/PANGAEA.972429
Rights: CC-BY-4.0: Creative Commons Attribution 4.0 International ; Access constraints: unrestricted ; info:eu-repo/semantics/openAccess
Přístupové číslo: edsbas.DC992653
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  – Url: https://doi.pangaea.de/10.1594/PANGAEA.972429#
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Items – Name: Title
  Label: Title
  Group: Ti
  Data: Seawater carbonate chemistry and heterotrophic capacity of Mediterranean corals
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  Data: <searchLink fieldCode="AR" term="%22Hulver%2C+Ann+Marie%22">Hulver, Ann Marie</searchLink><br /><searchLink fieldCode="AR" term="%22Carbonne%2C+Chloe%22">Carbonne, Chloe</searchLink><br /><searchLink fieldCode="AR" term="%22Teixido%2C+Nuria%22">Teixido, Nuria</searchLink><br /><searchLink fieldCode="AR" term="%22Comeau%2C+Steeve%22">Comeau, Steeve</searchLink><br /><searchLink fieldCode="AR" term="%22Kemp%2C+Dustin+W%22">Kemp, Dustin W</searchLink><br /><searchLink fieldCode="AR" term="%22Keister%2C+Elise+F%22">Keister, Elise F</searchLink><br /><searchLink fieldCode="AR" term="%22Gattuso%2C+Jean-Pierre%22">Gattuso, Jean-Pierre</searchLink><br /><searchLink fieldCode="AR" term="%22Grottoli%2C+Andréa+G%22">Grottoli, Andréa G</searchLink>
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  Data: PANGAEA
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  Label: Publication Year
  Group: Date
  Data: 2024
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  Label: Collection
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  Data: PANGAEA - Data Publisher for Earth & Environmental Science (AWI Bremerhaven / MARUM Bremen)
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  Data: <searchLink fieldCode="DE" term="%22Alkalinity%22">Alkalinity</searchLink><br /><searchLink fieldCode="DE" term="%22total%22">total</searchLink><br /><searchLink fieldCode="DE" term="%22standard+deviation%22">standard deviation</searchLink><br /><searchLink fieldCode="DE" term="%22Animalia%22">Animalia</searchLink><br /><searchLink fieldCode="DE" term="%22Aragonite+saturation+state%22">Aragonite saturation state</searchLink><br /><searchLink fieldCode="DE" term="%22Astroides+calycularis%22">Astroides calycularis</searchLink><br /><searchLink fieldCode="DE" term="%22Benthic+animals%22">Benthic animals</searchLink><br /><searchLink fieldCode="DE" term="%22Benthos%22">Benthos</searchLink><br /><searchLink fieldCode="DE" term="%22Bicarbonate+ion%22">Bicarbonate ion</searchLink><br /><searchLink fieldCode="DE" term="%22Biomass%22">Biomass</searchLink><br /><searchLink fieldCode="DE" term="%22Biomass%2FAbundance%2FElemental+composition%22">Biomass/Abundance/Elemental composition</searchLink><br /><searchLink fieldCode="DE" term="%22Calcification%2FDissolution%22">Calcification/Dissolution</searchLink><br /><searchLink fieldCode="DE" term="%22Calcification+rate%22">Calcification rate</searchLink><br /><searchLink fieldCode="DE" term="%22Calcite+saturation+state%22">Calcite saturation state</searchLink><br /><searchLink fieldCode="DE" term="%22Calculated+using+seacarb%22">Calculated using seacarb</searchLink><br /><searchLink fieldCode="DE" term="%22Calculated+using+seacarb+after+Nisumaa+et+al%2E+%282010%29%22">Calculated using seacarb after Nisumaa et al. (2010)</searchLink><br /><searchLink fieldCode="DE" term="%22Calculated+using+seacarb+after+Orr+et+al%2E+%282018%29%22">Calculated using seacarb after Orr et al. (2018)</searchLink><br /><searchLink fieldCode="DE" term="%22Carbohydrates%22">Carbohydrates</searchLink><br /><searchLink fieldCode="DE" term="%22Carbon%22">Carbon</searchLink><br /><searchLink fieldCode="DE" term="%22inorganic%22">inorganic</searchLink><br /><searchLink fieldCode="DE" term="%22dissolved%22">dissolved</searchLink><br /><searchLink fieldCode="DE" term="%22Carbonate+ion%22">Carbonate ion</searchLink><br /><searchLink fieldCode="DE" term="%22Carbonate+system+computation+flag%22">Carbonate system computation flag</searchLink><br /><searchLink fieldCode="DE" term="%22Carbon+dioxide%22">Carbon dioxide</searchLink><br /><searchLink fieldCode="DE" term="%22Chiane%5FAmbient%22">Chiane_Ambient</searchLink><br /><searchLink fieldCode="DE" term="%22Chiane%5FVent%22">Chiane_Vent</searchLink><br /><searchLink fieldCode="DE" term="%22Chlorophyll+a%22">Chlorophyll a</searchLink><br /><searchLink fieldCode="DE" term="%22per+dry+mass%22">per dry mass</searchLink><br /><searchLink fieldCode="DE" term="%22Cladocora+caespitosa%22">Cladocora caespitosa</searchLink><br /><searchLink fieldCode="DE" term="%22Cnidaria%22">Cnidaria</searchLink>
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  Data: <searchLink fieldCode="DE" term="%22MEDIAN+LATITUDE%3A+40%2E712250+*+MEDIAN+LONGITUDE%3A+13%2E960750+*+SOUTH-BOUND+LATITUDE%3A+40%2E701000+*+WEST-BOUND+LONGITUDE%3A+13%2E954000+*+NORTH-BOUND+LATITUDE%3A+40%2E718000+*+EAST-BOUND+LONGITUDE%3A+13%2E965000+*+DATE%2FTIME+START%3A+2019-05-07T00%3A00%3A00+*+DATE%2FTIME+END%3A+2019-05-08T00%3A00%3A00%22">MEDIAN LATITUDE: 40.712250 * MEDIAN LONGITUDE: 13.960750 * SOUTH-BOUND LATITUDE: 40.701000 * WEST-BOUND LONGITUDE: 13.954000 * NORTH-BOUND LATITUDE: 40.718000 * EAST-BOUND LONGITUDE: 13.965000 * DATE/TIME START: 2019-05-07T00:00:00 * DATE/TIME END: 2019-05-08T00:00:00</searchLink>
– Name: Abstract
  Label: Description
  Group: Ab
  Data: In Ischia, Italy, two species of Mediterranean scleractinian corals–the symbiotic Cladocora caespitosa and the asymbiotic Astroides calycularis–were collected from ambient pH sites (average pHT = 8.05) and adjacent CO2 vent sites (average pHT = 7.8) to evaluate their response to ocean acidification. Coral colonies from both sites were reared in a laboratory setting for six months at present day pH (pHT ~ 8.08) or low pH (pHT ~7.72). We hypothesized that these corals cope with low pH by increasing their heterotrophic capacity (i.e., feeding and/or proportion of heterotrophically derived compounds incorporated in their tissues), irrespective of site of origin, which was quantified indirectly by measuring δ13C, δ15N, and sterols. To further characterize coral health, we quantified energy reserves by measuring biomass, total lipids, and lipid classes. Additional analysis for C. caespitosa included carbohydrates (an energy reserve) and chlorophyll a (an indicator of photosynthetic capacity). This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were extracted from supplementary in the related paper (see Related to) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-04-11.
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  Data: text/tab-separated-values, 3064 data points
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  Data: English
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  Data: Hulver, Ann Marie; Carbonne, Chloe; Teixido, Nuria; Comeau, Steeve; Kemp, Dustin W; Keister, Elise F; Gattuso, Jean-Pierre; Grottoli, Andréa G (2024): Elevated heterotrophic capacity as a strategy for Mediterranean corals to cope with low pH at CO2 vents. PLoS ONE, 19(7), e0306725, https://doi.org/10.1371/journal.pone.0306725; Carbonne, Chloe; Teixidó, Núria; Moore, B; Mirasole, Alice; Guttierez, Thomas; Gattuso, Jean-Pierre; Comeau, Steeve (2021): Seawater carbonate chemistry and long term calcification, dark respiration, gross photosynthesis, and short-term calcification of two Mediterranean colonial corals Cladocora caespitosa (zooxanthellate) and Astroides calycularis (azooxanthellate) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.943187 (Carbonate chemistry data); Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010; Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html; https://doi.pangaea.de/10.1594/PANGAEA.972429; https://doi.org/10.1594/PANGAEA.972429
– Name: DOI
  Label: DOI
  Group: ID
  Data: 10.1594/PANGAEA.972429
– Name: URL
  Label: Availability
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  Data: https://doi.pangaea.de/10.1594/PANGAEA.972429<br />https://doi.org/10.1594/PANGAEA.972429
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  Data: CC-BY-4.0: Creative Commons Attribution 4.0 International ; Access constraints: unrestricted ; info:eu-repo/semantics/openAccess
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  Data: edsbas.DC992653
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        Value: 10.1594/PANGAEA.972429
    Languages:
      – Text: English
    Subjects:
      – SubjectFull: MEDIAN LATITUDE: 40.712250 * MEDIAN LONGITUDE: 13.960750 * SOUTH-BOUND LATITUDE: 40.701000 * WEST-BOUND LONGITUDE: 13.954000 * NORTH-BOUND LATITUDE: 40.718000 * EAST-BOUND LONGITUDE: 13.965000 * DATE/TIME START: 2019-05-07T00:00:00 * DATE/TIME END: 2019-05-08T00:00:00
        Type: general
      – SubjectFull: Alkalinity
        Type: general
      – SubjectFull: total
        Type: general
      – SubjectFull: standard deviation
        Type: general
      – SubjectFull: Animalia
        Type: general
      – SubjectFull: Aragonite saturation state
        Type: general
      – SubjectFull: Astroides calycularis
        Type: general
      – SubjectFull: Benthic animals
        Type: general
      – SubjectFull: Benthos
        Type: general
      – SubjectFull: Bicarbonate ion
        Type: general
      – SubjectFull: Biomass
        Type: general
      – SubjectFull: Biomass/Abundance/Elemental composition
        Type: general
      – SubjectFull: Calcification/Dissolution
        Type: general
      – SubjectFull: Calcification rate
        Type: general
      – SubjectFull: Calcite saturation state
        Type: general
      – SubjectFull: Calculated using seacarb
        Type: general
      – SubjectFull: Calculated using seacarb after Nisumaa et al. (2010)
        Type: general
      – SubjectFull: Calculated using seacarb after Orr et al. (2018)
        Type: general
      – SubjectFull: Carbohydrates
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      – SubjectFull: Carbon
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      – SubjectFull: Carbonate ion
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      – SubjectFull: Carbonate system computation flag
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      – SubjectFull: Carbon dioxide
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      – SubjectFull: Chiane_Ambient
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      – SubjectFull: Chiane_Vent
        Type: general
      – SubjectFull: Chlorophyll a
        Type: general
      – SubjectFull: per dry mass
        Type: general
      – SubjectFull: Cladocora caespitosa
        Type: general
      – SubjectFull: Cnidaria
        Type: general
    Titles:
      – TitleFull: Seawater carbonate chemistry and heterotrophic capacity of Mediterranean corals
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            – D: 01
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              Type: published
              Y: 2024
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