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Seawater carbonate chemistry and competition between soft coral (Xenia) and hard coral (Stylophora pistillata)

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Název: Seawater carbonate chemistry and competition between soft coral (Xenia) and hard coral (Stylophora pistillata)
Autoři: Grillo, Ana C, Simancas-Giraldo, Susana Marcela, Steinel, Nico, Longhini, Cybelle M, Soares, Marcelo Oliveira, Bejarano, Sonia, Longo, G O
Informace o vydavateli: PANGAEA
Rok vydání: 2025
Sbírka: PANGAEA - Data Publisher for Earth & Environmental Science (AWI Bremerhaven / MARUM Bremen)
Témata: Alkalinity, total, standard error, Animalia, Aragonite saturation state, Area, Benthic animals, Benthos, Bicarbonate ion, Calcification/Dissolution, Calcification rate, Calcite saturation state, Calculated using CO2SYS, Calculated using seacarb after Nisumaa et al. (2010), Carbon, inorganic, dissolved, Carbonate ion, Carbonate system computation flag, Carbon dioxide, Chlorophyll a, Cnidaria, Containers and aquaria (20-1000 L or < 1 m**2), Fugacity of carbon dioxide (water) at sea surface temperature (wet air), Growth/Morphology, Growth rate, Identification, Laboratory experiment, Laboratory strains, Macro-nutrients
Popis: We conducted a 28-day laboratory orthogonal experiment to test if acidification (950 µatm pCO2) and moderate to high nitrate enrichment (4 and 8 µmolL−1) negatively affect the hard coral Stylophora pistillata while physically competing with the soft coral Xenia spp. We measured photosynthetic efficiency (PE) in hard corals and growth rate, Symbiodiniaceae density, and chlorophyll-a concentration in both hard and soft corals as proxies for their condition and responses to competition. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from James Cook University (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-09-16.
Druh dokumentu: dataset
Popis souboru: text/tab-separated-values, 28133 data points
Jazyk: English
Relation: Grillo, Ana C; Simancas-Giraldo, Susana Marcela; Steinel, Nico; Longhini, Cybelle M; Soares, Marcelo Oliveira; Bejarano, Sonia; Longo, G O (2025): Ocean acidification and nitrate enrichment can mitigate negative effects of soft coral (Xenia) competition on hard coral (Stylophora pistillata) endosymbionts. Scientific Reports, 15(1), 29937, https://doi.org/10.1038/s41598-025-15683-5; Grillo Monteiro, Ana; Ortigara Longo, Guilherme; Hoogenboom, Mia (2025): Data for: Ocean acidification and nitrate enrichment on competition between hard and soft corals [dataset]. James Cook University, https://doi.org/10.25903/YJHM-DB37; Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010; Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024; Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016; Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2019): seacarb: Seawater Carbonate Chemistry. R package version 3.2.15. https://CRAN.R-project.org/package=seacarb; https://doi.pangaea.de/10.1594/PANGAEA.985075; https://doi.org/10.1594/PANGAEA.985075
DOI: 10.1594/PANGAEA.985075
Dostupnost: https://doi.pangaea.de/10.1594/PANGAEA.985075
https://doi.org/10.1594/PANGAEA.985075
Rights: CC-BY-4.0: Creative Commons Attribution 4.0 International ; Access constraints: unrestricted ; info:eu-repo/semantics/openAccess
Přístupové číslo: edsbas.B0D69989
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  Label: Title
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  Data: Seawater carbonate chemistry and competition between soft coral (Xenia) and hard coral (Stylophora pistillata)
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  Data: 2025
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– Name: Abstract
  Label: Description
  Group: Ab
  Data: We conducted a 28-day laboratory orthogonal experiment to test if acidification (950 &#181;atm pCO2) and moderate to high nitrate enrichment (4 and 8 &#181;molL−1) negatively affect the hard coral Stylophora pistillata while physically competing with the soft coral Xenia spp. We measured photosynthetic efficiency (PE) in hard corals and growth rate, Symbiodiniaceae density, and chlorophyll-a concentration in both hard and soft corals as proxies for their condition and responses to competition. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from James Cook University (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2025-09-16.
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  Data: Grillo, Ana C; Simancas-Giraldo, Susana Marcela; Steinel, Nico; Longhini, Cybelle M; Soares, Marcelo Oliveira; Bejarano, Sonia; Longo, G O (2025): Ocean acidification and nitrate enrichment can mitigate negative effects of soft coral (Xenia) competition on hard coral (Stylophora pistillata) endosymbionts. Scientific Reports, 15(1), 29937, https://doi.org/10.1038/s41598-025-15683-5; Grillo Monteiro, Ana; Ortigara Longo, Guilherme; Hoogenboom, Mia (2025): Data for: Ocean acidification and nitrate enrichment on competition between hard and soft corals [dataset]. James Cook University, https://doi.org/10.25903/YJHM-DB37; Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010; Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Fr&#233;d&#233;ric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024; Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016; Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, H&#233;lo&#239;se; Orr, James (2019): seacarb: Seawater Carbonate Chemistry. R package version 3.2.15. https://CRAN.R-project.org/package=seacarb; https://doi.pangaea.de/10.1594/PANGAEA.985075; https://doi.org/10.1594/PANGAEA.985075
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  Data: 10.1594/PANGAEA.985075
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      – Type: doi
        Value: 10.1594/PANGAEA.985075
    Languages:
      – Text: English
    Subjects:
      – SubjectFull: Alkalinity
        Type: general
      – SubjectFull: total
        Type: general
      – SubjectFull: standard error
        Type: general
      – SubjectFull: Animalia
        Type: general
      – SubjectFull: Aragonite saturation state
        Type: general
      – SubjectFull: Area
        Type: general
      – SubjectFull: Benthic animals
        Type: general
      – SubjectFull: Benthos
        Type: general
      – SubjectFull: Bicarbonate ion
        Type: general
      – SubjectFull: Calcification/Dissolution
        Type: general
      – SubjectFull: Calcification rate
        Type: general
      – SubjectFull: Calcite saturation state
        Type: general
      – SubjectFull: Calculated using CO2SYS
        Type: general
      – SubjectFull: Calculated using seacarb after Nisumaa et al. (2010)
        Type: general
      – SubjectFull: Carbon
        Type: general
      – SubjectFull: inorganic
        Type: general
      – SubjectFull: dissolved
        Type: general
      – SubjectFull: Carbonate ion
        Type: general
      – SubjectFull: Carbonate system computation flag
        Type: general
      – SubjectFull: Carbon dioxide
        Type: general
      – SubjectFull: Chlorophyll a
        Type: general
      – SubjectFull: Cnidaria
        Type: general
      – SubjectFull: Containers and aquaria (20-1000 L or < 1 m**2)
        Type: general
      – SubjectFull: Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
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      – SubjectFull: Growth/Morphology
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      – SubjectFull: Growth rate
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      – SubjectFull: Identification
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      – SubjectFull: Laboratory experiment
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      – SubjectFull: Laboratory strains
        Type: general
      – SubjectFull: Macro-nutrients
        Type: general
    Titles:
      – TitleFull: Seawater carbonate chemistry and competition between soft coral (Xenia) and hard coral (Stylophora pistillata)
        Type: main
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              Y: 2025
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