Banded dye murex, Hexaplex trunculus measurements of total weight, soft tissue weight and net calcification rate in males and females over the 310 day ocean acidification experiment
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| Název: | Banded dye murex, Hexaplex trunculus measurements of total weight, soft tissue weight and net calcification rate in males and females over the 310 day ocean acidification experiment |
|---|---|
| Autoři: | Grđan, Sanja, Dupont, Sam, Glamuzina, Luka, Cetinić, Ana Bratoš |
| Informace o vydavateli: | PANGAEA |
| Rok vydání: | 2025 |
| Sbírka: | PANGAEA - Data Publisher for Earth & Environmental Science (AWI Bremerhaven / MARUM Bremen) |
| Témata: | Alkalinity, total, standard deviation, Animalia, Aragonite saturation state, Bay_Bistrina, Benthic animals, Benthos, Bicarbonate ion, Calcification/Dissolution, Calcification rate, Calcite saturation state, Calculated using CO2SYS, Calculated using seacarb after Nisumaa et al. (2010), Calculated using seacarb after Orr et al. (2018), Carbon, inorganic, dissolved, Carbonate ion, Carbonate system computation flag, Carbon dioxide, Coast and continental shelf, Containers and aquaria (20-1000 L or < 1 m**2), EXP, Experiment, Fugacity of carbon dioxide (water) at sea surface temperature (wet air), Fugacity of carbon dioxide in seawater, Growth/Morphology, Growth rate, Hexaplex trunculus |
| Geografické téma: | LATITUDE: 42.871900 * LONGITUDE: 17.700600 * DATE/TIME START: 2020-08-01T00:00:00 * DATE/TIME END: 2020-08-31T00:00:00 |
| Popis: | Physiological traits of banded dye murex were measured during the exposure to a range of pH over the course of 310 days. Gastropods were collected in Bistrina Bay, part of the Mali Ston Bay in the Southeastern Adriatic Sea (42°52'19.1 N 17°42'02.3 E). Experiment was performed in Laboratory for Mariculture, University of Dubrovnik. Banded dye murexes were maintained in nine treatment tanks (volume 130L) with a flow-through water system with filtered, UV-sterilized, and aerated ambient seawater pumped directly from the Bistrina Bay adjacent to the laboratory facilities. Nine pH treatments were assigned to tanks, ranging from pHT 7.95 to 7.22. pH was manipulated by bubling pure CO2 gas, controlled with pH computers (Milwaukee MC122).Temperature, salinity, dissolved oxygen concentration were measured using multiparametric probes (YSI Pro 30 & Oxygen Handy Polaris, respectively). pH was measured on a total scale (pHT) by the potentiometric method with TRIS (2-amino-2-hydroxy-1,3-propanediol) buffer. Total alkalinity (TA, µmol kg-1) was determined with the potentiometric two-point open-cell 0.1 M HCl titration. Other seawater carbonate chemistry parameters (pCO2, ΩCa, ΩAr) were calculated based on known TA and pHT for a given salinity using CO2SYS software. Measurments of total weight were performed eight times during the experiment: day 28, 59, 91, 133, 172, 196, 236 & 310. Total wet weight was measured to the nearest 0.01 g on the top-load scale (Mettler toledo JL602-G/L) for the same individuals nine times over the course of experiment. Prior to weighing, snails were placed on absorbent blotting paper for approximately 20 minutes to remove excess water. The procedure was repeated eight times during the experiment (day 28, 59, 91, 133, 172, 196, 236, 310). Total weight growth rate (TWGR in g day-1) was calculated for each individual as the change in the shell weight between successive observation points divided by time. Net calcification rate was measured with a buoyant weight technique where the weight of ... |
| Druh dokumentu: | dataset |
| Popis souboru: | text/tab-separated-values, 20068 data points |
| Jazyk: | English |
| Relation: | Grđan, Sanja; Dupont, Sam; Glamuzina, Luka; Cetinić, Ana Bratoš (2025): When time reveals the cost: effects of long-term exposure to low pH on a predatory gastropod. Marine Ecology, 46, e70039, https://doi.org/10.1111/maec.70039; Grđan, Sanja; Dupont, Sam; Glamuzina, Luka; Bratoš Cetinić, Ana (2024): Seawater carbonate chemistry and shell growth rate of Hexaplex trunculus, an important predatory gastropod in benthic communities of Mali Ston Bay [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.965891; Dickson, Andrew G (1993): pH buffers for sea water media based on the total hydrogen ion concentration scale. Deep Sea Research Part I: Oceanographic Research Papers, 40(1), 107-118, https://doi.org/10.1016/0967-0637(93)90055-8; Dickson, Andrew G; Millero, Frank J (1987): A comparison of the equilibrium constants for the dissociation of carbonic acid in seawater media. Deep Sea Research Part A. Oceanographic Research Papers, 34(10), 1733-1743, https://doi.org/10.1016/0198-0149(87)90021-5; Dickson, Andrew G; Sabine, Christopher L; Christian, J R (2007): Guide to Best Practices for Ocean CO2 Measurements. PICES Special Publication, 3, 191 pp, hdl:10013/epic.51789.d001; Grđan, Sanja; Dupont, Sam; Glamuzina, Luka; Bratoš Cetinić, Ana (2023): Potential for acclimation of banded-dye murex, Hexaplex trunculus (Linnaeus, 1758) after long-term exposure to low pH. Naše more, 70(3), 137-146, https://doi.org/10.17818/NM/2023/SI1; Lewis, Ernie R; Wallace, Douglas WR (1998): Program Developed for CO2 System Calculations. Environmental System Science Data Infrastructure for a Virtual Ecosystem, https://doi.org/10.15485/1464255; Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010; Palmer, A R (1982): Growth in marine gastropods: A non-destructive technique for independently measuring shell and body weight. Malacologia, 23, 63-67; Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024; Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016; Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html; Carbonate chemistry (URI: https://download.pangaea.de/reference/132613/attachments/Carbonate%20chemistry.xlsx); Data that are going to be presented in figures in a paper (URI: https://download.pangaea.de/reference/132614/attachments/Htrunculus_PHYSdata_updated.xlsx); https://doi.pangaea.de/10.1594/PANGAEA.980753; https://doi.org/10.1594/PANGAEA.980753 |
| DOI: | 10.1594/PANGAEA.980753 |
| Dostupnost: | https://doi.pangaea.de/10.1594/PANGAEA.980753 https://doi.org/10.1594/PANGAEA.980753 |
| Rights: | CC-BY-4.0: Creative Commons Attribution 4.0 International ; Access constraints: unrestricted ; info:eu-repo/semantics/openAccess |
| Přístupové číslo: | edsbas.5912B889 |
| Databáze: | BASE |
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| Header | DbId: edsbas DbLabel: BASE An: edsbas.5912B889 RelevancyScore: 861 AccessLevel: 3 PubType: PubTypeId: unknown PreciseRelevancyScore: 861.3056640625 |
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| Items | – Name: Title Label: Title Group: Ti Data: Banded dye murex, Hexaplex trunculus measurements of total weight, soft tissue weight and net calcification rate in males and females over the 310 day ocean acidification experiment – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AR" term="%22Grđan%2C+Sanja%22">Grđan, Sanja</searchLink><br /><searchLink fieldCode="AR" term="%22Dupont%2C+Sam%22">Dupont, Sam</searchLink><br /><searchLink fieldCode="AR" term="%22Glamuzina%2C+Luka%22">Glamuzina, Luka</searchLink><br /><searchLink fieldCode="AR" term="%22Cetinić%2C+Ana+Bratoš%22">Cetinić, Ana Bratoš</searchLink> – Name: Publisher Label: Publisher Information Group: PubInfo Data: PANGAEA – Name: DatePubCY Label: Publication Year Group: Date Data: 2025 – Name: Subset Label: Collection Group: HoldingsInfo Data: PANGAEA - Data Publisher for Earth & Environmental Science (AWI Bremerhaven / MARUM Bremen) – Name: Subject Label: Subject Terms Group: Su Data: <searchLink fieldCode="DE" term="%22Alkalinity%22">Alkalinity</searchLink><br /><searchLink fieldCode="DE" term="%22total%22">total</searchLink><br /><searchLink fieldCode="DE" term="%22standard+deviation%22">standard deviation</searchLink><br /><searchLink fieldCode="DE" term="%22Animalia%22">Animalia</searchLink><br /><searchLink fieldCode="DE" term="%22Aragonite+saturation+state%22">Aragonite saturation state</searchLink><br /><searchLink fieldCode="DE" term="%22Bay%5FBistrina%22">Bay_Bistrina</searchLink><br /><searchLink fieldCode="DE" term="%22Benthic+animals%22">Benthic animals</searchLink><br /><searchLink fieldCode="DE" term="%22Benthos%22">Benthos</searchLink><br /><searchLink fieldCode="DE" term="%22Bicarbonate+ion%22">Bicarbonate ion</searchLink><br /><searchLink fieldCode="DE" term="%22Calcification%2FDissolution%22">Calcification/Dissolution</searchLink><br /><searchLink fieldCode="DE" term="%22Calcification+rate%22">Calcification rate</searchLink><br /><searchLink fieldCode="DE" term="%22Calcite+saturation+state%22">Calcite saturation state</searchLink><br /><searchLink fieldCode="DE" term="%22Calculated+using+CO2SYS%22">Calculated using CO2SYS</searchLink><br /><searchLink fieldCode="DE" term="%22Calculated+using+seacarb+after+Nisumaa+et+al%2E+%282010%29%22">Calculated using seacarb after Nisumaa et al. (2010)</searchLink><br /><searchLink fieldCode="DE" term="%22Calculated+using+seacarb+after+Orr+et+al%2E+%282018%29%22">Calculated using seacarb after Orr et al. (2018)</searchLink><br /><searchLink fieldCode="DE" term="%22Carbon%22">Carbon</searchLink><br /><searchLink fieldCode="DE" term="%22inorganic%22">inorganic</searchLink><br /><searchLink fieldCode="DE" term="%22dissolved%22">dissolved</searchLink><br /><searchLink fieldCode="DE" term="%22Carbonate+ion%22">Carbonate ion</searchLink><br /><searchLink fieldCode="DE" term="%22Carbonate+system+computation+flag%22">Carbonate system computation flag</searchLink><br /><searchLink fieldCode="DE" term="%22Carbon+dioxide%22">Carbon dioxide</searchLink><br /><searchLink fieldCode="DE" term="%22Coast+and+continental+shelf%22">Coast and continental shelf</searchLink><br /><searchLink fieldCode="DE" term="%22Containers+and+aquaria+%2820-1000+L+or+<+1+m**2%29%22">Containers and aquaria (20-1000 L or < 1 m**2)</searchLink><br /><searchLink fieldCode="DE" term="%22EXP%22">EXP</searchLink><br /><searchLink fieldCode="DE" term="%22Experiment%22">Experiment</searchLink><br /><searchLink fieldCode="DE" term="%22Fugacity+of+carbon+dioxide+%28water%29+at+sea+surface+temperature+%28wet+air%29%22">Fugacity of carbon dioxide (water) at sea surface temperature (wet air)</searchLink><br /><searchLink fieldCode="DE" term="%22Fugacity+of+carbon+dioxide+in+seawater%22">Fugacity of carbon dioxide in seawater</searchLink><br /><searchLink fieldCode="DE" term="%22Growth%2FMorphology%22">Growth/Morphology</searchLink><br /><searchLink fieldCode="DE" term="%22Growth+rate%22">Growth rate</searchLink><br /><searchLink fieldCode="DE" term="%22Hexaplex+trunculus%22">Hexaplex trunculus</searchLink> – Name: Subject Label: Subject Geographic Group: Su Data: <searchLink fieldCode="DE" term="%22LATITUDE%3A+42%2E871900+*+LONGITUDE%3A+17%2E700600+*+DATE%2FTIME+START%3A+2020-08-01T00%3A00%3A00+*+DATE%2FTIME+END%3A+2020-08-31T00%3A00%3A00%22">LATITUDE: 42.871900 * LONGITUDE: 17.700600 * DATE/TIME START: 2020-08-01T00:00:00 * DATE/TIME END: 2020-08-31T00:00:00</searchLink> – Name: Abstract Label: Description Group: Ab Data: Physiological traits of banded dye murex were measured during the exposure to a range of pH over the course of 310 days. Gastropods were collected in Bistrina Bay, part of the Mali Ston Bay in the Southeastern Adriatic Sea (42°52'19.1 N 17°42'02.3 E). Experiment was performed in Laboratory for Mariculture, University of Dubrovnik. Banded dye murexes were maintained in nine treatment tanks (volume 130L) with a flow-through water system with filtered, UV-sterilized, and aerated ambient seawater pumped directly from the Bistrina Bay adjacent to the laboratory facilities. Nine pH treatments were assigned to tanks, ranging from pHT 7.95 to 7.22. pH was manipulated by bubling pure CO2 gas, controlled with pH computers (Milwaukee MC122).Temperature, salinity, dissolved oxygen concentration were measured using multiparametric probes (YSI Pro 30 & Oxygen Handy Polaris, respectively). pH was measured on a total scale (pHT) by the potentiometric method with TRIS (2-amino-2-hydroxy-1,3-propanediol) buffer. Total alkalinity (TA, µmol kg-1) was determined with the potentiometric two-point open-cell 0.1 M HCl titration. Other seawater carbonate chemistry parameters (pCO2, ΩCa, ΩAr) were calculated based on known TA and pHT for a given salinity using CO2SYS software. Measurments of total weight were performed eight times during the experiment: day 28, 59, 91, 133, 172, 196, 236 & 310. Total wet weight was measured to the nearest 0.01 g on the top-load scale (Mettler toledo JL602-G/L) for the same individuals nine times over the course of experiment. Prior to weighing, snails were placed on absorbent blotting paper for approximately 20 minutes to remove excess water. The procedure was repeated eight times during the experiment (day 28, 59, 91, 133, 172, 196, 236, 310). Total weight growth rate (TWGR in g day-1) was calculated for each individual as the change in the shell weight between successive observation points divided by time. Net calcification rate was measured with a buoyant weight technique where the weight of ... – Name: TypeDocument Label: Document Type Group: TypDoc Data: dataset – Name: Format Label: File Description Group: SrcInfo Data: text/tab-separated-values, 20068 data points – Name: Language Label: Language Group: Lang Data: English – Name: NoteTitleSource Label: Relation Group: SrcInfo Data: Grđan, Sanja; Dupont, Sam; Glamuzina, Luka; Cetinić, Ana Bratoš (2025): When time reveals the cost: effects of long-term exposure to low pH on a predatory gastropod. Marine Ecology, 46, e70039, https://doi.org/10.1111/maec.70039; Grđan, Sanja; Dupont, Sam; Glamuzina, Luka; Bratoš Cetinić, Ana (2024): Seawater carbonate chemistry and shell growth rate of Hexaplex trunculus, an important predatory gastropod in benthic communities of Mali Ston Bay [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.965891; Dickson, Andrew G (1993): pH buffers for sea water media based on the total hydrogen ion concentration scale. Deep Sea Research Part I: Oceanographic Research Papers, 40(1), 107-118, https://doi.org/10.1016/0967-0637(93)90055-8; Dickson, Andrew G; Millero, Frank J (1987): A comparison of the equilibrium constants for the dissociation of carbonic acid in seawater media. Deep Sea Research Part A. Oceanographic Research Papers, 34(10), 1733-1743, https://doi.org/10.1016/0198-0149(87)90021-5; Dickson, Andrew G; Sabine, Christopher L; Christian, J R (2007): Guide to Best Practices for Ocean CO2 Measurements. PICES Special Publication, 3, 191 pp, hdl:10013/epic.51789.d001; Grđan, Sanja; Dupont, Sam; Glamuzina, Luka; Bratoš Cetinić, Ana (2023): Potential for acclimation of banded-dye murex, Hexaplex trunculus (Linnaeus, 1758) after long-term exposure to low pH. Naše more, 70(3), 137-146, https://doi.org/10.17818/NM/2023/SI1; Lewis, Ernie R; Wallace, Douglas WR (1998): Program Developed for CO2 System Calculations. Environmental System Science Data Infrastructure for a Virtual Ecosystem, https://doi.org/10.15485/1464255; Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010; Palmer, A R (1982): Growth in marine gastropods: A non-destructive technique for independently measuring shell and body weight. Malacologia, 23, 63-67; Yang, Yan; Brockmann, Patrick; Galdino, Carolina; Schindler, Uwe; Gazeau, Frédéric (2024): An update of data compilation on the biological response to ocean acidification and overview of the OA-ICC data portal. Earth System Science Data, 16(8), 3771-3780, https://doi.org/10.5194/essd-16-3771-2024; Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016; Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html; Carbonate chemistry (URI: https://download.pangaea.de/reference/132613/attachments/Carbonate%20chemistry.xlsx); Data that are going to be presented in figures in a paper (URI: https://download.pangaea.de/reference/132614/attachments/Htrunculus_PHYSdata_updated.xlsx); https://doi.pangaea.de/10.1594/PANGAEA.980753; https://doi.org/10.1594/PANGAEA.980753 – Name: DOI Label: DOI Group: ID Data: 10.1594/PANGAEA.980753 – Name: URL Label: Availability Group: URL Data: https://doi.pangaea.de/10.1594/PANGAEA.980753<br />https://doi.org/10.1594/PANGAEA.980753 – Name: Copyright Label: Rights Group: Cpyrght Data: CC-BY-4.0: Creative Commons Attribution 4.0 International ; Access constraints: unrestricted ; info:eu-repo/semantics/openAccess – Name: AN Label: Accession Number Group: ID Data: edsbas.5912B889 |
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| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1594/PANGAEA.980753 Languages: – Text: English Subjects: – SubjectFull: LATITUDE: 42.871900 * LONGITUDE: 17.700600 * DATE/TIME START: 2020-08-01T00:00:00 * DATE/TIME END: 2020-08-31T00:00:00 Type: general – SubjectFull: Alkalinity Type: general – SubjectFull: total Type: general – SubjectFull: standard deviation Type: general – SubjectFull: Animalia Type: general – SubjectFull: Aragonite saturation state Type: general – SubjectFull: Bay_Bistrina Type: general – SubjectFull: Benthic animals Type: general – SubjectFull: Benthos Type: general – SubjectFull: Bicarbonate ion Type: general – SubjectFull: Calcification/Dissolution Type: general – SubjectFull: Calcification rate Type: general – SubjectFull: Calcite saturation state Type: general – SubjectFull: Calculated using CO2SYS Type: general – SubjectFull: Calculated using seacarb after Nisumaa et al. (2010) Type: general – SubjectFull: Calculated using seacarb after Orr et al. (2018) Type: general – SubjectFull: Carbon Type: general – SubjectFull: inorganic Type: general – SubjectFull: dissolved Type: general – SubjectFull: Carbonate ion Type: general – SubjectFull: Carbonate system computation flag Type: general – SubjectFull: Carbon dioxide Type: general – SubjectFull: Coast and continental shelf Type: general – SubjectFull: Containers and aquaria (20-1000 L or < 1 m**2) Type: general – SubjectFull: EXP Type: general – SubjectFull: Experiment Type: general – SubjectFull: Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Type: general – SubjectFull: Fugacity of carbon dioxide in seawater Type: general – SubjectFull: Growth/Morphology Type: general – SubjectFull: Growth rate Type: general – SubjectFull: Hexaplex trunculus Type: general Titles: – TitleFull: Banded dye murex, Hexaplex trunculus measurements of total weight, soft tissue weight and net calcification rate in males and females over the 310 day ocean acidification experiment Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Grđan, Sanja – PersonEntity: Name: NameFull: Dupont, Sam – PersonEntity: Name: NameFull: Glamuzina, Luka – PersonEntity: Name: NameFull: Cetinić, Ana Bratoš IsPartOfRelationships: – BibEntity: Dates: – D: 01 M: 01 Type: published Y: 2025 Identifiers: – Type: issn-locals Value: edsbas |
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