Improved description of environment and vibronic effects with electrostatically embedded ML potentials
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| Titel: | Improved description of environment and vibronic effects with electrostatically embedded ML potentials |
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| Autoren: | Kirill Zinovjev, Carles Curutchet |
| Quelle: | J Phys Chem Lett Articles publicats en revistes (Farmàcia, Tecnologia Farmacèutica i Fisicoquímica) Dipòsit Digital de la UB instname |
| Verlagsinformationen: | American Chemical Society (ACS), 2024. |
| Publikationsjahr: | 2024 |
| Schlagwörter: | Gasos, Letter, Fluid dynamics, Dinàmica de fluids, Química quàntica, Gases, Quantum chemistry |
| Beschreibung: | Incorporation of environment and vibronic effects in simulations of optical spectra and excited state dynamics is commonly done combining molecular dynamics with excite state calculations, which allows to estimate the spectral density describing the frequency-dependent system-bath coupling strength. The need for efficient sampling, however, usually leads to the adoption of classical force fields, despite well-known inaccuracies due to the mismatch with the excited state method. Here we present a multiscale strategy that overcomes this limitation by combining EMLE simulations based on electrostatically embedded ML potentials with the QM/MMPol polarizable embedding model to compute the excited states and spectral density of 3-methyl-indole, the chromophoric moiety of tryptophan that mediates a variety of important biological functions. Our protocol provides highly accurate results that faithfully reproduce their ab initio QM/MM counterparts, thus paving the way for accurate investigations on the interrelation between the timescales of biological motion and the photophysics of tryptophan and other biosystems. |
| Publikationsart: | Article Other literature type |
| Dateibeschreibung: | application/pdf |
| ISSN: | 1948-7185 |
| DOI: | 10.26434/chemrxiv-2024-kvhzf-v2 |
| DOI: | 10.1021/acs.jpclett.4c02949 |
| DOI: | 10.26434/chemrxiv-2024-kvhzf |
| Zugangs-URL: | https://hdl.handle.net/2445/218483 |
| Rights: | CC BY NC CC BY URL: http://creativecommons.org/licenses/by/4.0/This article is licensed under CC-BY 4.0 |
| Dokumentencode: | edsair.doi.dedup.....e68f00b51faa55314246d973fa54f876 |
| Datenbank: | OpenAIRE |
Nájsť tento článok vo Web of Science | Abstract: | Incorporation of environment and vibronic effects in simulations of optical spectra and excited state dynamics is commonly done combining molecular dynamics with excite state calculations, which allows to estimate the spectral density describing the frequency-dependent system-bath coupling strength. The need for efficient sampling, however, usually leads to the adoption of classical force fields, despite well-known inaccuracies due to the mismatch with the excited state method. Here we present a multiscale strategy that overcomes this limitation by combining EMLE simulations based on electrostatically embedded ML potentials with the QM/MMPol polarizable embedding model to compute the excited states and spectral density of 3-methyl-indole, the chromophoric moiety of tryptophan that mediates a variety of important biological functions. Our protocol provides highly accurate results that faithfully reproduce their ab initio QM/MM counterparts, thus paving the way for accurate investigations on the interrelation between the timescales of biological motion and the photophysics of tryptophan and other biosystems. |
|---|---|
| ISSN: | 19487185 |
| DOI: | 10.26434/chemrxiv-2024-kvhzf-v2 |