Decoding dissolved information: environmental DNA sequencing at global scale to monitor a changing ocean.
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| Názov: | Decoding dissolved information: environmental DNA sequencing at global scale to monitor a changing ocean. |
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| Autori: | Thompson LR; Northern Gulf Institute, Mississippi State University, 2 Research Blvd, Starkville, MS 39759, USA; Ocean Chemistry and Ecosystems Division, Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, 4301 Rickenbacker Cswy, Miami, FL 33149, USA. Electronic address: luke.thompson@noaa.gov., Thielen P; Johns Hopkins University Applied Physics Laboratory, 11100 Johns Hopkins Road, Laurel, MD 20723-6099, USA. |
| Zdroj: | Current opinion in biotechnology [Curr Opin Biotechnol] 2023 Jun; Vol. 81, pp. 102936. Date of Electronic Publication: 2023 Apr 14. |
| Spôsob vydávania: | Journal Article; Review; Research Support, Non-U.S. Gov't |
| Jazyk: | English |
| Informácie o časopise: | Publisher: Elsevier Country of Publication: England NLM ID: 9100492 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0429 (Electronic) Linking ISSN: 09581669 NLM ISO Abbreviation: Curr Opin Biotechnol Subsets: MEDLINE |
| Imprint Name(s): | Publication: London : Elsevier Original Publication: London : Current Biology, c1990- |
| Výrazy zo slovníka MeSH: | DNA, Environmental*/genetics, Biological Specimen Banks ; Biodiversity ; Sequence Analysis, DNA ; Oceans and Seas ; Environmental Monitoring ; DNA Barcoding, Taxonomic ; Ecosystem |
| Abstrakt: | The use of environmental DNA (eDNA) technology for environmental monitoring is rapidly expanding, with applications for fisheries, coral reefs, harmful algal blooms, invasive and endangered species, and biodiversity monitoring. By enabling detection of species over space and time, eDNA fulfills a fundamental need of environmental surveys. Traditional surveys are expensive, require significant capital expenditure, and can be destructive; eDNA offers promise for cheaper, less invasive, and higher-resolution (i.e. genetic) assessments of environments and stocks. However, challenges in quantification, detection limits, biobanking capacity, reference databases, and data management and integration remain significant hurdles to efficient eDNA monitoring at global and decadal scale. Here, we consider the current state of eDNA technology and its suitability for the problems for which it is being used. We explore the current best practices, the logistical and social challenges that prevent eDNA from widespread adoption and benefit, and the emerging technologies that may address those challenges. (Copyright © 2023 Elsevier Ltd. All rights reserved.) |
| Competing Interests: | Conflict of interest statement The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. |
| Substance Nomenclature: | 0 (DNA, Environmental) |
| Entry Date(s): | Date Created: 20230415 Date Completed: 20230531 Latest Revision: 20230602 |
| Update Code: | 20250114 |
| DOI: | 10.1016/j.copbio.2023.102936 |
| PMID: | 37060640 |
| Databáza: | MEDLINE |
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