Search Results - https :// github

DeepPSA: A Geometric Deep Learning Model for PROTAC Synthetic Accessibility Prediction

Authors: Ran Zhang Shihang Wang Lin Wang et al.

Subject Terms: Biochemistry, Genetics, Molecular Biology, Biotechnology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, target proteins via, molecules remain underdeveloped, https :// bailab, generative artificial intelligence, garnered significant attention, demonstrate superior performance, based partitioned datasets, based model built, https :// github, exceptional generalization ability, drug design due, experimental synthetic data, protac synthetic accessibility, synthetic accessibility, github repository, web server, test set, targeting chimeras, protac synthesis, prediction accuracy, novel compounds, house dataset, essential tool, driven approach

Relation: https://figshare.com/articles/journal_contribution/DeepPSA_A_Geometric_Deep_Learning_Model_for_PROTAC_Synthetic_Accessibility_Prediction/29403711

Availability: https://doi.org/10.1021/acs.jcim.5c00366.s001
https://figshare.com/articles/journal_contribution/DeepPSA_A_Geometric_Deep_Learning_Model_for_PROTAC_Synthetic_Accessibility_Prediction/29403711

2Pipe starts with a question: matching you with the correct pipeline for MAG reconstruction.

Authors: Yepes-García, Jeferyd Falquet, Laurent

Source: MSystems; Feb2026, Vol. 11 Issue 2, p1-27, 27p

DynamiSpectra: A Python Software Package and Web Platform for Molecular Dynamics Data Analysis in Computational Biology

Authors: Iverson Conrado Bezerra Jéssika de Oliveira Viana Karen Cacilda Weber et al.

Subject Terms: Biophysics, Biochemistry, Cell Biology, Biotechnology, Hematology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, thereby promoting accessible, secondary structure probability, residue distance matrices, quality graphical outputs, packages often lack, ligand occupancy maps, https :// pypi, generate interactive plots, different temperatures illustrates, comparative tests performed, amyloid peptide simulations, online web server, principal component analysis, descriptive statistical analysis, based software package, web platform designed, https :// github, https :// dynamispectra, reproducible md analysis, reproducible analysis tools, python software package, web platform

Relation: https://figshare.com/articles/journal_contribution/DynamiSpectra_A_Python_Software_Package_and_Web_Platform_for_Molecular_Dynamics_Data_Analysis_in_Computational_Biology/29955680

Availability: https://doi.org/10.1021/acs.jcim.5c01270.s002
https://figshare.com/articles/journal_contribution/DynamiSpectra_A_Python_Software_Package_and_Web_Platform_for_Molecular_Dynamics_Data_Analysis_in_Computational_Biology/29955680

Effects of a Bacillus-based spore probiotic on the gut microbiota of weaned piglets.

Authors: Kolchyk, Olena Borovkov, Sergii Tarasov, Oleksandr et al.

Source: Jurnal Medik Veterinar. Apr2026, Vol. 9 Issue 1, p16-28. 13p.

Streptococcus suis in Water Buffalo Calves: First Report with Histological and Genomic Insights.

Authors: Paoletti, Massimiliano Rossi, Franca Del Matto, Ilaria et al.

Source: Veterinaria Italiana. 2025, Vol. 61 Issue 2, p1-11. 11p.

Bacterial biodiversity and metagenomic study of dadih, traditional fermented buffalo milk from Kampar district, Riau, Indonesia.

Authors: Rossi, Evy Pato, Usman Ayu, Dewi Fortuna et al.

Source: Journal of Advanced Veterinary & Animal Research. Sep2025, Vol. 12 Issue 3, p717-727. 11p.

Genomic Links between Listeria monocytogenes in Wild Animals and the Food Chain: Insights from Central and Southern Italy.

Authors: Chiaverini, Alexandra Guidi, Fabrizia Centorotola, Gabriella et al.

Source: Veterinaria Italiana. 2026, Vol. 62 Issue 1, p1-14. 14p.

Whole-genome selection signatures identified candidate genes associated with cashmere traits in Inner Mongolia cashmere goats.

Authors: Youjun Rong Xiaofang Ao Mingxuan Han et al.

Source: Animal Bioscience. Dec2025, Vol. 38 Issue 12, p2597-2611. 15p.

肿瘤基因诊断二代测序生物信息学分析平台本地化建设中国专家 共识 (2024年版). (Chinese)

Alternate Title: Chinese expert consensus on the localization of bioinformatics analysis for tumor genetic diagnosis using next⁃generation sequencing (2024 edition). (English)

Source: Chinese Journal of Oncology Prevention & Treatment; Dec2024, Vol. 16 Issue 6, p638-649, 12p

Metagenomics reveals potential interactions between Patescibacteriota and their phages in groundwater ecosystems.

Authors: Hu, Bingxin An, Liyun Wu, Mengdi et al.

Source: MSystems; Feb2026, Vol. 11 Issue 2, p1-16, 16p

Profiling of Dominant Bacteria in Traditional Buffalo Milk Cheese "Dangke" Based on 16S rRNA Sequencing.

Authors: Mutmainna, A. Arief, I. I. Budiman, C. et al.

Source: Tropical Animal Science Journal. Sep2025, Vol. 48 Issue 5, p450-461. 12p.

Metagenomic analysis of fecal microbiomes reveals genetic potential for diverse hydrogen management strategies in marsupials.

Authors: Bowerman, Kate L. Lu, Yang McRae, Harley et al.

Source: MSystems; Feb2026, Vol. 11 Issue 2, p1-16, 16p

Dextran sodium sulfate-induced colitis alters the proportion and composition of replicating gut bacteria.

Authors: Beauchemin, Eve T. Hunter, Claire Maurice, Corinne F.

Source: MSphere; Jan2025, Vol. 10 Issue 1, p1-25, 25p

Growth Curve Patterns in Broilers and KU-Phuphan and Pradu Hang Dam Chickens Using Nonlinear Models.

Authors: Plaengkaew, S. Khumpeerawat, P. Sukprasert, C. et al.

Source: Tropical Animal Science Journal. Mar2026, Vol. 49 Issue 2, p99-106. 8p.

Virtual Colon: spatiotemporal modeling of metabolic interactions in a computational colonic environment.

Authors: Marinos, Georgios Zimmermann, Johannes Taubenheim, Jan et al.

Source: MSystems; Jan2026, Vol. 11 Issue 1, p1-17, 17p

CORE GUT MICROBIOTA IN RABBIT: OPPORTUNITIES TO STRENGTHEN THE INTESTINAL BARRIER.

Authors: Combes, Sylvie Cauquil, Laurent Rumeau, Mathilde et al.

Source: World Rabbit Science. Apr-Jun2025, Vol. 33 Issue 2, p103-125. 23p.

Microbial community of civet excreta fed by robusta cherry coffee in Indonesian civet coffee production.

Authors: Winarsih, Sri Hasanah, Uswatun Nuraida, Lilis et al.

Source: Journal of Advanced Veterinary & Animal Research. Jun2025, Vol. 12 Issue 2, p565-581. 17p.

What we (don’t) know about parrot welfare: Finding welfare indicators through a systematic literature review.

Authors: Piseddu, Andrea van Zeeland, Yvonne R. A. Rault, Jean-Loup

Source: Animal Welfare. 2024, Vol. 33, p1-14. 14p.

Subjects: Animal welfare, Parrots, Body weight, Point set theory, Social interaction

The vaginal microbiome of pregnant people living with HIV on antiretroviral therapy in the Democratic Republic of Congo: a pilot study and global meta-analysis.

Authors: Ndlovu, Kimberley S. Pavan, Ricardo R. Corry, Jacqueline et al.

Source: MSphere; Feb2026, Vol. 11 Issue 2, p1-22, 22p

Characterizing ceftriaxone tolerance in Neisseria gonorrhoeae across in vitro and in vivo models.

Authors: Kanesaka, Izumo Bari, Anurag Kumar Abdellati, Saïd et al.

Source: MSystems; Feb2026, Vol. 11 Issue 2, p1-17, 17p