Search Results - friendly python program

Visual codon: a user-friendly Python program for viewing and optimizing gene GC content

Authors: Shiming Lin Fei Xu Bifang Huang et al.

Source: PeerJ, Vol 12, p e18755 (2024)

Subject Terms: Codon optimization, GC content, Python, Subcloning, Gene synthesis, Medicine, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://peerj.com/articles/18755.pdf; https://peerj.com/articles/18755/; https://doaj.org/toc/2167-8359

Access URL: https://doaj.org/article/57f7ebf0c38245d982d923afdddd9d77

PySTACHIO: Python Single-molecule TrAcking stoiCHiometry Intensity and simulatiOn, a flexible, extensible, beginner-friendly and optimized program for analysis of single-molecule microscopy

Authors: Shepherd, Jack W Higgins, Ed J Wollman, Adam J M et al.

Index Terms: Quantitative Biology - Biomolecules, Computer Science - Programming Languages, Physics - Biological Physics, text

URL: http://arxiv.org/abs/2103.10164

MYTHOS: A Python Interface for Surface Crystal Structure Prediction of Organic Semiconductors

Authors: Emilio Lorini Karsten Walzer Martin Pfeiffer et al.

Subject Terms: Biophysics, Medicine, Cell Biology, Biotechnology, Infectious Diseases, Computational Biology, Space Science, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, Information Systems not elsewhere classified, new computational approach, molecular dynamics simulations, friendly python program, experimental crystalline parameters, python interface, molecular mechanics, crystalline formation, thus allowing, sequential layer, relevant polymorphs, organic semiconductors, optimizing thin, layer analysis, induced polymorphs, good match, given molecule, flat surfaces, film systems, essential step

Relation: https://figshare.com/articles/journal_contribution/MYTHOS_A_Python_Interface_for_Surface_Crystal_Structure_Prediction_of_Organic_Semiconductors/29525576

Availability: https://doi.org/10.1021/acs.jcim.5c00669.s001
https://figshare.com/articles/journal_contribution/MYTHOS_A_Python_Interface_for_Surface_Crystal_Structure_Prediction_of_Organic_Semiconductors/29525576

Visual codon: a user-friendly Python program for viewing and optimizing gene GC content.

Authors: Lin, Shiming Xu, Fei Huang, Bifang et al.

Source: PeerJ; Dec2024, p1-11, 11p

Subject Terms: GRAPHICAL user interfaces, MOLECULAR cloning, POLYMERASE chain reaction, DNA polymerases, PROTEIN expression

A Python tool for predicting optimal solvent blends based on Hansen solubility parameters.

Authors: Albrecht, Florian Strube, Oliver I.

Source: Journal of Coatings Technology & Research; Jul2025, Vol. 22 Issue 4, p1263-1268, 6p

Subject Terms: SOLUBILITY, APPLICATION software, DISSOLUTION (Chemistry), MIXTURES, POLYMER blends, PYTHON programming language, SOLVENT analysis

A Python tool for predicting optimal solvent blends based on Hansen solubility parameters

Authors: Florian Albrecht Oliver I. Strube

Source: Journal of Coatings Technology and Research. 22:1263-1268

RE-NUM-OR: Python-based Renumbering and Reordering Software for Pedigree Files.

Authors: YAZGAN, KEMAL¹ kemalyazgan@gmail.comkyazgan@harran.edu.tr

Source: Czech Journal of Animal Science. 2018, Vol. 63 Issue 2, p70-77. 8p.

Subjects: Information storage & retrieval systems software, Computer files

A Python program for the implementation of the {\Gamma}-method for Monte Carlo simulations

Authors: De Palma, Barbara Erba, Marco Mantovani, Luca et al.

Index Terms: High Energy Physics - Lattice, Physics - Computational Physics, text

URL: http://arxiv.org/abs/1703.02766

Revolutionizing Molecular cloning: Introducing FastCloneAssist, a Streamlined Python tool for optimizing primer design in restriction & ligation-independent PCR cloning.

Authors: Singh, Pradip Kumar Donnenberg, Michael S.

Source: PLoS ONE; 3/13/2025, Vol. 20 Issue 3, p1-12, 12p

Subject Terms: MOLECULAR cloning, CHIMERIC proteins, MINIMAL design, GENE amplification, SCIENTIFIC discoveries, DNA primers

Utilizing Preprogrammed GIS-Functions through User Friendly Python Scripted Map Solutions

Authors: Nordin, Magnus Midtbø, Terje Le Brun, Hege

Contributors: Nordin, Magnus Midtbø, Terje Le Brun, Hege

Availability: https://hdl.handle.net/11250/3012207

Introduction to Scientific Programming with Python

Authors: Joakim Sundnes

Resource Type: eBook.

Subjects: Python (Computer program language)

Categories: MATHEMATICS / Applied, COMPUTERS / Computer Science, COMPUTERS / Programming / General, COMPUTERS / Languages / General, COMPUTERS / Software Development & Engineering / General

User guide for Social Determinants of Health Survey data in the All of Us Research Program.

Authors: Koleck, Theresa A Dreisbach, Caitlin Zhang, Chen et al.

Source: Journal of the American Medical Informatics Association. Dec2024, Vol. 31 Issue 12, p3032-3041. 10p.

Subject Terms: Social determinants of health, Health equity, Research personnel, Sociometry, Source code

Python framework for parallelism on a cluster

Authors: Pinto, Miguel Morato Roxo Ribeiro Duarte, Vítor RUN

Contributors: Pinto, Miguel Morato Roxo Ribeiro Duarte, Vítor RUN

Subject Terms: Distributed Parallel Programming, Python, Torc_py, Scoop, Dask, Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática

File Description: application/pdf

Availability: http://hdl.handle.net/10362/178006

A practical approach of partial striking technique in high-rise buildings.

Authors: Sahu, Arti Shanmugapriya, S.

Source: Engineering Construction & Architectural Management (09699988); 2025, Vol. 32 Issue 2, p987-1009, 23p

Subject Terms: BUILDING design & construction, NUMERICAL analysis, CONSTRUCTION projects, METROPOLITAN areas, CONSTRUCTION costs

Assistive Intelligence Sensing Device With Python Intergration.

Authors: S., Keerthana S., Jemimah Margrate L., Mariya Suvetha et al.

Source: Journal of Advanced Zoology. 2024, Vol. 45 Issue 4, p202-211. 10p.

PyRESP: A Program for Electrostatic Parameterizations of Additive and Induced Dipole Polarizable Force Fields.

Authors: Zhao, Shiji Wei, Haixin Cieplak, Piotr et al.

Source: Journal of chemical theory and computation; vol 18, iss 6, 3654-3670; 1549-9618

Index Terms: Models, Molecular, Static Electricity, Theoretical and Computational Chemistry, Biochemistry and Cell Biology, Computer Software, Chemical Physics, article

URL: https://escholarship.org/uc/item/2px3c3gf
https://escholarship.org/

GenoSee: a novel visualization tool for graphical genotypes.

Authors: Shumpei Hashimoto¹ hashimotoshumpeiq@g.eec.u-tokyo.ac.jp

Source: Breeding Science. 2024, Vol. 74 Issue 5, p454-461. 8p.

Subjects: Nucleotide sequencing, Data visualization, Genotypes, Customization

PySmash: Python package and individual executable program for representative substructure generation and application.

Authors: Yang, Zi-Yi Yang, Zhi-Jiang Zhao, Yue et al.

Source: Briefings in Bioinformatics. Sep2021, Vol. 22 Issue 5, p1-8. 8p.

Subject Terms: *DATA integrity, PYTHON programming language, QSAR models, CHEMICAL libraries, DOSAGE forms of drugs, MACHINE learning

dmscatter: A Fast Program for WIMP-Nucleus Scattering

Authors: Gorton, Oliver Johnson, Calvin Jiao, Changfeng et al.

Index Terms: Nuclear Theory, Astrophysics - Cosmology and Nongalactic Astrophysics, High Energy Physics - Phenomenology, Nuclear Experiment, text

URL: http://arxiv.org/abs/2209.09187

Microgrid Planner: An Open-Source Software Platform.

Authors: Reich, Daniel Frye, Leah

Source: INFORMS Journal on Computing. May/Jun2025, Vol. 37 Issue 3, p503-515. 13p.

Subject Terms: *MICROGRIDS, *OPEN source software, *APPLICATION program interfaces, PYTHON programming language, PLANNING techniques, ENERGY development