Search Results - computing algorithms and (((bioinformatics OR information) OR bioinformatika) OR informatika)

Differentiable Visual Computing: Challenges and Opportunities

Authors: Li, Tzu-Mao Pattanaik, Sumanta N

Source: IEEE Computer Graphics and Applications. 42(2)

Subject Terms: Information and Computing Sciences, Machine Learning, Bioengineering, Algorithms, Learning, Neural Networks, Computer, Artificial Intelligence and Image Processing, Electrical and Electronic Engineering, Software Engineering, Computer vision and multimedia computation, Graphics, augmented reality and games, Human-centred computing

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Access URL: https://escholarship.org/uc/item/84p8t2nt
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A Theoretical Justification for Asymmetric Actor-Critic Algorithms

Authors: Lambrechts, Gaspard Ernst, Damien Mahajan, Aditya

Source: Proceedings of Machine Learning Research (2025-07); International Conference on Machine Learning, Vancouver, Canada [CA], July 15th, 2025

Subject Terms: Asymmetric Learning, Privileged Information, Finite-Time Bound, Convergence Analysis, Natural Actor Critic, Aliasing, Partially Observable Environment, Privileged Critic, Asymmetric Actor-Critic, Agent-State Policy, Engineering, computing & technology, Computer science, Ingénierie, informatique & technologie, Sciences informatiques

Relation: urn:issn:2640-3498

Access URL: https://orbi.uliege.be/handle/2268/326874

A GA-P algorithm to automatically formulate extended Boolean queries for a fuzzy information retrieval system

Authors: Cordón García, Oscar De Moya Anegón, Félix Zarco Fernández, Carmen

Source: Mathware & soft computing; 2000: Vol.: 7 Núm.: 2-3

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Relation: https://www.raco.cat/index.php/Mathware/article/view/84808/109805

Access URL: https://www.raco.cat/index.php/Mathware/article/view/84808

Sequential and parallel algorithms for sequence analysis problems in bioinformatics

Authors: Liu, Xuan

Subject Terms: 572.8, Sequence analysis, approximate string matching problem, exact string matching problem, shortest common superstring problem, closest string problem, heuristic algorithm, genetic algorithm, simulated annealing algorithm, parallel algorithms

Access URL: https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.506205

Real-Time Krylov Theory for Quantum Computing Algorithms

Authors: Shen, Yizhi Klymko, Katherine Sud, James et al.

Source: Quantum. 7

Subject Terms: 51 Physical Sciences (for-2020), 49 Mathematical sciences (for-2020), 51 Physical sciences (for-2020)

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Access URL: https://escholarship.org/uc/item/6w32c0d0
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Derivation and Analysis of Distributed Computing Algorithms in Biological Systems

Authors: Chandrasekhar, Arjun

Subject Terms: Bioinformatics, Computer science, Ecology, Algorithms in Nature, Ant Biology, Distributed Computing, Neuroscience, Optimization

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Analysis on predict model of railway passenger travel factors judgment with soft-computing methods

Authors: Yan, Xi Li, Jing

Source: Journal of Industrial Engineering and Management; 2014: Vol.: 7 Núm.: 1

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Relation: https://www.raco.cat/index.php/JIEM/article/view/275657/363625

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Extracting insect information from entomological museum collections to identify potential insect pests and beneficials using deep learning methods

Authors: Noël, Grégoire Delcommune, Nicolas Black, Gautier et al.

Source: BrIAS Agri 2025 (2025-02-06); BrIAS Conference on Smart Agriculture, Brussels, Belgium [BE], 06-07/02/2025

Subject Terms: Engineering, computing & technology, Ingénierie, informatique & technologie

Access URL: https://orbi.uliege.be/handle/2268/328073

Solving chemical master equation for large biological networks: Novel state-space expansion algorithm based on artificial intelligence and Bayesian standards: A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy at Lincoln University

Contributors: Kosarwal, Rahul

Availability: http://api.digitalnz.org/records/52621183/source

Degree: Doctoral

Improvement to the cooperative rules methodology by using the ant colony system algorithm

Authors: Alcalá Fernández, Rafael Casillas Barranquero, Jorge Cordón García, Oscar et al.

Source: Mathware & soft computing; 2001: Vol.: 8 Núm.: 3

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Relation: https://www.raco.cat/index.php/Mathware/article/view/84842/109839

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Subspace methods for electronic structure simulations on quantum computers

Authors: Motta, Mario Kirby, William Liepuoniute, Ieva et al.

Source: Electronic Structure. 6(1)

Subject Terms: Engineering, Information and Computing Sciences, Applied Computing, Electronics, Sensors and Digital Hardware, Physical Sciences, Atomic, Molecular and Optical Physics

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Access URL: https://escholarship.org/uc/item/2x71n4j0
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FluxRETAP: a REaction TArget Prioritization genome-scale modeling technique for selecting genetic targets

Authors: Czajka, Jeffrey J Kim, Joonhoon Tang, Yinjie J et al.

Source: Bioinformatics. 41(9)

Subject Terms: 31 Biological Sciences (for-2020), 3106 Industrial Biotechnology (for-2020), Genetics (rcdc), Biotechnology (rcdc), Bioengineering (rcdc), Escherichia coli (mesh), Metabolic Engineering (mesh), Software (mesh), Synthetic Biology (mesh), Pseudomonas putida (mesh), Machine Learning (mesh), Genome, Bacterial (mesh), Algorithms (mesh), Metabolic Networks and Pathways (mesh), Pseudomonas putida (mesh), Escherichia coli (mesh), Genome, Bacterial (mesh), Algorithms (mesh), Software (mesh), Metabolic Networks and Pathways (mesh), Synthetic Biology (mesh), Metabolic Engineering (mesh), Machine Learning (mesh), Escherichia coli (mesh), Metabolic Engineering (mesh), Software (mesh), Synthetic Biology (mesh), Pseudomonas putida (mesh), Machine Learning (mesh), Genome, Bacterial (mesh), Algorithms (mesh), Metabolic Networks and Pathways (mesh), 01 Mathematical Sciences (for), 06 Biological Sciences (for), 08 Information and Computing Sciences (for), Bioinformatics (science-metrix), 31 Biological sciences (for-2020), 46 Information and computing sciences (for-2020), 49 Mathematical sciences (for-2020)

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DNABERT-S: pioneering species differentiation with species-aware DNA embeddings

Authors: Zhou, Zhihan Wu, Weimin Ho, Harrison et al.

Source: Bioinformatics. 41(Supplement_1)

Subject Terms: 31 Biological Sciences (for-2020), 3102 Bioinformatics and Computational Biology (for-2020), 3105 Genetics (for-2020), 46 Information and Computing Sciences (for-2020), 4611 Machine Learning (for-2020), Human Genome (rcdc), Genetics (rcdc), Generic health relevance (hrcs-hc), 3 Good Health and Well Being (sdg), Sequence Analysis, DNA (mesh), DNA (mesh), Genomics (mesh), Algorithms (mesh), Species Specificity (mesh), Genome (mesh), 46 Information and Computing Sciences (for-2020), 31 Biological Sciences (for-2020), 3105 Genetics (for-2020), 4611 Machine Learning (for-2020), Human Genome (rcdc), Genetics (rcdc), Generic health relevance (hrcs-hc), 3 Good Health and Well Being (sdg), DNA (mesh), Sequence Analysis, DNA (mesh), Genomics (mesh), Species Specificity (mesh), Genome (mesh), Algorithms (mesh), Sequence Analysis, DNA (mesh), DNA (mesh), Genomics (mesh), Algorithms (mesh), Species Specificity (mesh), Genome (mesh), 01 Mathematical Sciences (for), 06 Biological Sciences (for), 08 Information and Computing Sciences (for), Bioinformatics (science-metrix), 31 Biological sciences (for-2020), 46 Information and computing sciences (for-2020), 49 Mathematical sciences (for-2020)

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SetBERT: the deep learning platform for contextualized embeddings and explainable predictions from high-throughput sequencing

Authors: Ludwig, David W Guptil, Christopher Alexander, Nicholas R et al.

Source: Bioinformatics. 41(7)

Subject Terms: 46 Information and Computing Sciences (for-2020), 31 Biological Sciences (for-2020), 3102 Bioinformatics and Computational Biology (for-2020), Bioengineering (rcdc), Networking and Information Technology R&D (NITRD) (rcdc), Human Genome (rcdc), Genetics (rcdc), Machine Learning and Artificial Intelligence (rcdc), 3 Good Health and Well Being (sdg), Deep Learning (mesh), High-Throughput Nucleotide Sequencing (mesh), Sequence Analysis, DNA (mesh), Microbiota (mesh), Software (mesh), Computational Biology (mesh), Algorithms (mesh), Sequence Analysis, DNA (mesh), Computational Biology (mesh), Algorithms (mesh), Software (mesh), High-Throughput Nucleotide Sequencing (mesh), Microbiota (mesh), Deep Learning (mesh), Deep Learning (mesh), High-Throughput Nucleotide Sequencing (mesh), Sequence Analysis, DNA (mesh), Microbiota (mesh), Software (mesh), Computational Biology (mesh), Algorithms (mesh), 01 Mathematical Sciences (for), 06 Biological Sciences (for), 08 Information and Computing Sciences (for), Bioinformatics (science-metrix), 31 Biological sciences (for-2020), 46 Information and computing sciences (for-2020), 49 Mathematical sciences (for-2020)

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Kingdom-wide CRISPR guide design with ALLEGRO

Authors: Mohseni, Amirsadra Nia, Reyhane Ghorbani Tafrishi, Aida et al.

Source: Nucleic Acids Research. 53(15)

Subject Terms: Biological Sciences, Bioinformatics and Computational Biology, Biotechnology, Genetics, Human Genome, Generic health relevance, RNA, Guide, CRISPR-Cas Systems, CRISPR-Cas Systems, Genome, Fungal, Gene Editing, Algorithms, Kluyveromyces, Saccharomyces cerevisiae, Clustered Regularly Interspaced Short Palindromic Repeats, Yarrowia, Rhodotorula, Gene Library, Saccharomycetales, Environmental Sciences, Information and Computing Sciences, Developmental Biology, Biological sciences, Chemical sciences, Environmental sciences

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TRFill: synergistic use of HiFi and Hi-C sequencing enables accurate assembly of tandem repeats for population-level analysis.

Authors: Wen, Huaming Yang, Jinbao Zhao, Xianjia et al.

Source: Genome biology. 26(1)

Subject Terms: Centromere, Telomere, Humans, Sequence Analysis, DNA, Tandem Repeat Sequences, Algorithms, Software, Solanum lycopersicum, Gap filling, Genome assembly, Reference-guided genome assembly, Segmental duplications, Tandem repeats, Environmental Sciences, Biological Sciences, Information and Computing Sciences, Bioinformatics

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Replacing non-biomedical concepts improves embedding of biomedical concepts

Authors: Niyonkuru, Enock Gomez, Mauricio Soto Casarighi, Elena et al.

Source: PLOS ONE. 20(5)

Subject Terms: Information and Computing Sciences, Biological Sciences, Bioinformatics and Computational Biology, Algorithms, Machine Learning, Semantics, Medical Informatics Computing, General Science & Technology

File Description: application/pdf

Access URL: https://escholarship.org/uc/item/43k9s6k4
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Challenges in Information, Communication and Computing Technology : Proceedings of the 2nd International Conference on Challenges in Information, Communication, and Computing Technology (ICCICCT 2024), April 26th & 27th, 2024, Namakkal, Tamil Nadu, India

Authors: V. Sharmila S. Kannadhasan A. Rajiv Kannan et al.

Resource Type: eBook.

Subjects: Telecommunication systems--Congresses, Artificial intelligence--Congresses

Categories: TECHNOLOGY & ENGINEERING / Electrical, COMPUTERS / General, COMPUTERS / Computer Engineering, TECHNOLOGY & ENGINEERING / Mechanical

Proceedings of the 2023 International Conference on Data Science, Advanced Algorithm and Intelligent Computing (DAI 2023)

Authors: Badrul Hisham Ahmad

Resource Type: eBook.

Subjects: Computational intelligence--Congresses, Soft computing--Congresses, Electronic data processing--Congresses, Data mining--Statistical methods--Congresses, Computer algorithms--Congresses

Categories: COMPUTERS / General, COMPUTERS / Artificial Intelligence / General, COMPUTERS / Database Administration & Management, COMPUTERS / Security / General

Systematic benchmarking of computational methods to identify spatially variable genes

Authors: Li, Zhijian M.Patel, Zain Song, Dongyuan et al.

Source: Genome Biology. 26(1)

Subject Terms: 31 Biological Sciences (for-2020), 3102 Bioinformatics and Computational Biology (for-2020), Human Genome (rcdc), Genetics (rcdc), Networking and Information Technology R&D (NITRD) (rcdc), Benchmarking (mesh), Computational Biology (mesh), Algorithms (mesh), Gene Expression Profiling (mesh), Humans (mesh), Transcriptome (mesh), Benchmarking, Spatially variable genes, Simulation, Spatial omics, Visium, MERFISH, Humans (mesh), Gene Expression Profiling (mesh), Computational Biology (mesh), Algorithms (mesh), Benchmarking (mesh), Transcriptome (mesh), Benchmarking, MERFISH, Simulation, Spatial omics, Spatially variable genes, Visium, Benchmarking (mesh), Computational Biology (mesh), Algorithms (mesh), Gene Expression Profiling (mesh), Humans (mesh), Transcriptome (mesh), 05 Environmental Sciences (for), 06 Biological Sciences (for), 08 Information and Computing Sciences (for), Bioinformatics (science-metrix)

Access URL: https://escholarship.org/uc/item/16x872z6