Search Results - burrows–wheeler transfer longest common prefix array multithreading parallel algorithms~

Enhancing Data Compression: Recent Innovations in LZ77 Algorithms.

Authors: Hong, Aaron Boucher, Christina

Source: Journal of Computational Biology; Aug2025, Vol. 32 Issue 8, p761-780, 20p

GPU-based similarity metrics computation and machine learning approaches for string similarity evaluation in large datasets.

Authors: Baloi, Aurel Belean, Bogdan Turcu, Flaviu et al.

Source: Soft Computing - A Fusion of Foundations, Methodologies & Applications; Feb2024, Vol. 28 Issue 4, p3465-3477, 13p

Subject Terms: MACHINE learning, PARALLEL processing, GRAPHICS processing units, ELECTRONIC data processing, DIGITAL technology, COMPUTATIONAL complexity

Space-efficient computation of parallel approximate string matching.

Authors: Sadiq, Muhammad Umair Yousaf, Muhammad Murtaza

Source: Journal of Supercomputing; May2023, Vol. 79 Issue 8, p9093-9126, 34p

Subject Terms: PATTERN matching, DYNAMIC programming, VECTOR spaces, DNA sequencing, INFORMATION retrieval, NATURAL languages

3D-Stacked Many-Core Architecture for Biological Sequence Analysis Problems.

Authors: Liu, Pei Hemani, Ahmed Paul, Kolin et al.

Source: International Journal of Parallel Programming; Dec2017, Vol. 45 Issue 6, p1420-1460, 41p

Subject Terms: SEQUENCE analysis, APPLICATION-specific integrated circuits, COMPUTATIONAL biology, COPROCESSORS, THREE-dimensional integrated circuits, BIOINFORMATICS

Performance comparison of sequential and parallel compression applications for DNA raw data.

Authors: Guerra, Aníbal Lotero, Jaime Isaza, Sebastián

Source: Journal of Supercomputing; Dec2016, Vol. 72 Issue 12, p4696-4717, 22p

Subject Terms: DATA compression, SCALABILITY, RUN time systems (Computer science), COMPUTER storage capacity, BIOINFORMATICS

Using GPUs for the Exact Alignment of Short-Read Genetic Sequences by Means of the Burrows-Wheeler Transform.

Authors: Salavert Torres, Jose Blanquer Espert, Ignacio Tomas Dominguez, Andres et al.

Source: IEEE/ACM Transactions on Computational Biology & Bioinformatics; Jul2012, Vol. 9 Issue 4, p1245-1256, 0p

Sublinear Computation Paradigm

Authors: Naoki Katoh Yuya Higashikawa Hiro Ito et al.

Resource Type: eBook.

Subjects: Computer algorithms--Mathematics, Big data

Categories: COMPUTERS / Computer Science, COMPUTERS / Programming / Algorithms

Shared-Memory Parallelism Can Be Simple, Fast, and Scalable

Authors: Julian Shun

Resource Type: eBook.

Categories: COMPUTERS / Computer Architecture, COMPUTERS / Programming / Parallel, COMPUTERS / Programming / Algorithms

Structured Parallel Programming : Patterns for Efficient Computation

Authors: Michael McCool James Reinders Arch Robison

Resource Type: eBook.

Subjects: Parallel programming (Computer science)

Categories: COMPUTERS / Software Development & Engineering / General, COMPUTERS / Distributed Systems / General

Programming Algorithms in Lisp : Writing Efficient Programs with Examples in ANSI Common Lisp

Authors: Vsevolod Domkin

Resource Type: eBook.

Subjects: LISP (Computer program language), Programming languages (Electronic computers), Algorithms, Computer science, Open source software

Categories: COMPUTERS / Languages / General, COMPUTERS / General, COMPUTERS / Programming / Algorithms, COMPUTERS / Programming / Open Source

Algorithms and Architectures for Parallel Processing : 17th International Conference, ICA3PP 2017, Helsinki, Finland, August 21-23, 2017, Proceedings

Authors: Shadi Ibrahim Kim-Kwang Raymond Choo Zheng Yan et al.

Resource Type: eBook.

Subjects: Algorithms, Software engineering, Computer networks, Application software

Categories: COMPUTERS / Programming / Algorithms, COMPUTERS / Business & Productivity Software / General, COMPUTERS / Networking / General, COMPUTERS / Software Development & Engineering / General

Euro-Par 2025: Parallel Processing

Authors: Wolfgang E. Nagel Diana Goehringer Pedro C. Diniz

Resource Type: eBook.

Subjects: Electronic data processing--Distributed processing--Congresses, Parallel processing (Electronic computers)--Congresses

Categories: COMPUTERS / Data Transmission Systems / Electronic Data Interchange

Parallel Processing and Applied Mathematics : 11th International Conference, PPAM 2015, Krakow, Poland, September 6-9, 2015. Revised Selected Papers, Part II

Authors: Roman Wyrzykowski Ewa Deelman Jack Dongarra et al.

Resource Type: eBook.

Subjects: Software engineering, Algorithms, Application software, Computer programming, Computer networks, Computer science—Mathematics

Categories: COMPUTERS / Software Development & Engineering / General, COMPUTERS / Business & Productivity Software / General, COMPUTERS / Computer Science, COMPUTERS / Networking / General, COMPUTERS / Programming / General, COMPUTERS / Programming / Algorithms, MATHEMATICS / Applied

Euro-Par 2016: Parallel Processing Workshops : Euro-Par 2016 International Workshops, Grenoble, France, August 24-26, 2016, Revised Selected Papers

Authors: Frédéric Desprez Pierre-François Dutot Christos Kaklamanis et al.

Resource Type: eBook.

Subjects: Electronic digital computers—Evaluation, Software engineering, Computer networks, Database management, Algorithms, Application software

Categories: COMPUTERS / Computer Architecture, COMPUTERS / Business & Productivity Software / General, COMPUTERS / Database Administration & Management, COMPUTERS / Networking / General, COMPUTERS / Software Development & Engineering / General, COMPUTERS / Programming / Algorithms

Algorithms For Dummies

Authors: John Paul Mueller Luca Massaron

Resource Type: eBook.

Subjects: Computer algorithms

Categories: COMPUTERS / Programming / Algorithms, COMPUTERS / Data Science / General, COMPUTERS / Programming / General

Euro-Par 2015: Parallel Processing : 21st International Conference on Parallel and Distributed Computing, Vienna, Austria, August 24-28, 2015, Proceedings

Authors: Jesper Larsson Träff Sascha Hunold Francesco Versaci

Resource Type: eBook.

Subjects: Compilers (Computer programs), Operating systems (Computers), Electronic digital computers—Evaluation, Computer engineering, Computer networks, Algorithms, Software engineering

Categories: COMPUTERS / Programming / Compilers, COMPUTERS / Computer Architecture, COMPUTERS / Operating Systems / General, COMPUTERS / Software Development & Engineering / General, COMPUTERS / Programming / Algorithms, COMPUTERS / Hardware / General

Introduction to Algorithms, Fourth Edition

Authors: Thomas H. Cormen Charles E. Leiserson Ronald L. Rivest et al.

Resource Type: eBook.

Subjects: Computer programming, Computer algorithms

Categories: COMPUTERS / Programming / Algorithms, COMPUTERS / Computer Science, COMPUTERS / Reference

Parallel Processing and Applied Mathematics : 10th International Conference, PPAM 2013, Warsaw, Poland, September 8-11, 2013, Revised Selected Papers, Part II

Authors: Roman Wyrzykowski Jack Dongarra Konrad Karczewski et al.

Resource Type: eBook.

Subjects: Computer science

Categories: COMPUTERS / General

Algorithms For Dummies

Authors: John Paul Mueller Luca Massaron

Resource Type: eBook.

Subjects: Computer algorithms

Categories: COMPUTERS / Programming / Algorithms

Algorithmen : Eine Einführung

Authors: Thomas H. Cormen Charles E. Leiserson Ronald Rivest et al.

Resource Type: eBook.

Categories: COMPUTERS / Programming / Algorithms, COMPUTERS / General, COMPUTERS / Information Technology, COMPUTERS / Programming / General