Výsledky vyhledávání - Stochastic expansion from cell to cell algorithm

Assessment of spatiotemporal development of cell lineages in the mouse blastocyst using bespoke cell neighbourhood analysis approaches.

Autoři: de la Fuente, Roberto Forsyth, Jessica E.

Zdroj: Animal Science Papers & Reports. Sep2025, Vol. 43 Issue 3, p347-366. 20p.

Témata: Endoderm, Cell analysis, Cell differentiation, Fate mapping (Genetics), Spatio-temporal variation, Mammalian embryos

Modeling the effects of a Shock-and-Kill Treatment for HIV: Latency-Reversing Agents and Natural Killer Cells.

Autoři: Liu G Liu S Zhang C a další

Zdroj: Bulletin of mathematical biology [Bull Math Biol] 2025 Jul 25; Vol. 87 (9), pp. 116. Date of Electronic Publication: 2025 Jul 25.

Způsob vydávání: Journal Article

Informace o časopise: Publisher: Springer Country of Publication: United States NLM ID: 0401404 Publication Model: Electronic Cited Medium: Internet ISSN: 1522-9602 (Electronic) Linking ISSN: 00928240 NLM ISO Abbreviation: Bull Math Biol Subsets: MEDLINE

Výrazy ze slovníku MeSH: Killer Cells, Natural*/immunology , HIV Infections*/immunology , HIV Infections*/drug therapy , HIV Infections*/virology , HIV Infections*/therapy , HIV-1*/physiology , HIV-1*/drug effects , HIV-1*/immunology , Anti-HIV Agents*/therapeutic use , Anti-HIV Agents*/pharmacology , Models, Biological*, Virus Latency/drug effects ; Virus Latency/immunology ; Humans ; Mice ; Animals ; Mathematical Concepts ; Viral Load/drug effects ; Markov Chains ; Bayes Theorem ; Monte Carlo Method ; Algorithms

Phylogenetic Analysis, Morphological Characteristics, and Cellular Tropism of Vaccine‐Like Recombinant Strains of Lumpy Skin Disease Virus in China.

Autoři: Gong, Zuxin Li, Jinming Zou, Yanli a další

Zdroj: Transboundary & Emerging Diseases. 12/2/2025, Vol. 2025, p1-16. 16p.

Analysis of Singularly Perturbed Stochastic Chemical Reaction Networks Motivated by Applications to Epigenetic Cell Memory.

Autoři: Bruno, Simone Campos, Felipe A. Yi Fu a další

Zdroj: SIAM Journal on Applied Dynamical Systems. 2024, Vol. 23 Issue 4, p2695-2731. 37p.

Témata: *MARKOV processes, SINGULAR perturbations, GENE expression, CHEMICAL reactions, SET theory

Expansion and fluctuations-enhanced microscopy for nanoscale molecular profiling of cells and tissues.

Autoři: Kylies D Heil HS Vesga AG a další

Zdroj: Nature protocols [Nat Protoc] 2025 Jul 02. Date of Electronic Publication: 2025 Jul 02.

Způsob vydávání: Journal Article; Review

Informace o časopise: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101284307 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1750-2799 (Electronic) Linking ISSN: 17502799 NLM ISO Abbreviation: Nat Protoc Subsets: MEDLINE

The stochastic relativistic advection diffusion equation from the Metropolis algorithm

Autoři: Basar, Gokce Bhambure, Jay Singh, Rajeev a další

Témata: Nuclear Theory, Condensed Matter - Other Condensed Matter, High Energy Physics - Phenomenology, High Energy Physics - Theory, text

URL: http://arxiv.org/abs/2403.04185

Advances and applications in single-cell and spatial genomics.

Autoři: Wang J Ye F Chai H a další

Zdroj: Science China. Life sciences [Sci China Life Sci] 2025 May; Vol. 68 (5), pp. 1226-1282. Date of Electronic Publication: 2024 Dec 20.

Způsob vydávání: Journal Article; Review

Informace o časopise: Publisher: Science China Press, co-published with Springer Country of Publication: China NLM ID: 101529880 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1869-1889 (Electronic) Linking ISSN: 16747305 NLM ISO Abbreviation: Sci China Life Sci Subsets: MEDLINE

Výrazy ze slovníku MeSH: Single-Cell Analysis*/methods , Genomics*/methods, Humans ; Computational Biology/methods ; Animals

Reduction of a stochastic model of gene expression: Lagrangian dynamics gives access to basins of attraction as cell types and metastabilty.

Autoři: Ventre E Espinasse T Bréhier CE a další

Zdroj: Journal of mathematical biology [J Math Biol] 2021 Nov 05; Vol. 83 (5), pp. 59. Date of Electronic Publication: 2021 Nov 05.

Způsob vydávání: Journal Article; Research Support, Non-U.S. Gov't

Informace o časopise: Publisher: Springer Verlag Country of Publication: Germany NLM ID: 7502105 Publication Model: Electronic Cited Medium: Internet ISSN: 1432-1416 (Electronic) Linking ISSN: 03036812 NLM ISO Abbreviation: J Math Biol Subsets: MEDLINE

Výrazy ze slovníku MeSH: Biochemical Phenomena*, Gene Expression ; Gene Regulatory Networks ; Markov Chains ; Stochastic Processes

Inferring bacterial interspecific interactions from microcolony growth expansion.

Autoři: Miguel Trabajo, Tania Guex, Isaline Dubey, Manupriyam a další

Zdroj: MicroLife; 2024, Vol. 5, p1-18, 18p

Témata: PSEUDOMONAS putida, SUBSTRATES (Materials science), PHENOTYPIC plasticity, BIOMASS, SYNTROPHISM

Next‐Generation Vaccines for Co‐Circulating PEDV and TGEV: Integrating Nucleic Acid Platforms, Mucosal Delivery, and AI–Driven Antigen Design.

Autoři: Hu, Xiaojun Wang, Zhenshan Wang, Shen a další

Zdroj: Transboundary & Emerging Diseases. 12/4/2025, Vol. 2025, p1-26. 26p.

Combining Bulk and Single Cell RNA-Sequencing Data to Identify Hub Genes of Fibroblasts in Dilated Cardiomyopathy.

Autoři: Huang, Xiaoyan Zhao, Xiangrong Li, Yaping a další

Zdroj: Journal of Inflammation Research; Aug2024, Vol. 17, p5375-5388, 14p

Témata: COMMUNICATION network analysis, GENE expression, LABORATORY rats, TRANSCRIPTION factors, GENE regulatory networks

The Decade of Porcine Circovirus Type 2 (PCV2) in Thailand: Phylodynamic and Molecular Epidemiology.

Autoři: Sritrakul, Tepyuda Thanantong, Narut Boonsoongnern, Alongkot a další

Zdroj: Transboundary & Emerging Diseases. 12/6/2025, Vol. 2025, p1-16. 16p.

Pluvial flooding: High-resolution stochastic hazard mapping in urban areas by using fast-processing DEM-based algorithms

Autoři: Mediero Orduña, Luis Jesús Soriano Martín, Enrique Oria, Peio a další

Zdroj: Journal of Hydrology, ISSN 0022-1694, 2022-05-01, Vol. 608

Témata: Ingeniería Civil y de la Construcción, Hidrología, info:eu-repo/semantics/article, info:eu-repo/semantics/acceptedVersion

URL: https://oa.upm.es/85887/
https://www.sciencedirect.com/science/article/pii/S0022169422002244
https://www.sciencedirect.com/science/article/pii/S0022169422002244
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.jhydrol.2022.127649

Random walk on rectangles and parallelepipeds algorithm for solving transient anisotropic drift-diffusion-reaction problems.

Autoři: Sabelfeld, Karl K.¹ (AUTHOR) sabelfeld.karl@yahoo.de

Zdroj: Monte Carlo Methods & Applications. 2019, Vol. 25 Issue 2, p131-146. 16p.

Témata: *RANDOM walks, *ALGORITHMS, *TRANSPORT theory, *ELECTRIC potential, *ELECTRON transport, *RECTANGLES

A mixed-effects stochastic model reveals clonal dominance in gene therapy safety studies

Autoři: Del Core, Luca Pellin, Danilo Wit, Ernst C. a další

Zdroj: Del Core, L, Pellin, D, Wit, E C & Grzegorczyk, M A 2023, 'A mixed-effects stochastic model reveals clonal dominance in gene therapy safety studies', Bmc Bioinformatics, vol. 24, no. 1, 228.

Témata: Clonal dominance, E-M algorithm, Gene therapy, Mixed-effects models, Stochastic reaction networks, article

URL: https://research.rug.nl/en/publications/e255622f-b0f6-468a-ac3d-0fe768e736e7
https://doi.org/10.1186/s12859-023-05269-1
https://hdl.handle.net/11370/e255622f-b0f6-468a-ac3d-0fe768e736e7
https://pure.rug.nl/ws/files/717097816/s12859-023-05269-1.pdf
https://www.scopus.com/pages/publications/85160903869
info:eu-repo/semantics/altIdentifier/doi/10.1186/s12859-023-05269-1
info:eu-repo/semantics/altIdentifier/pmid/37268887
info:eu-repo/semantics/altIdentifier/hdl/https://hdl.handle.net/11370/e255622f-b0f6-468a-ac3d-0fe768e736e7
info:eu-repo/semantics/altIdentifier/pissn/1471-2105
info:eu-repo/semantics/altIdentifier/eissn/1471-2105

Optimizing and Personalising Azacitidine Combination Therapy for Treating Solid Tumours QPOP and CURATE.AI

Autoři: The N.1 Institute for Health (N.1) Cancer Science Institute of Singapore

Zdroj: Optimizing and Personalising Azacitidine Combination Therapy for Treating Solid Tumours Using the Quadratic Phenotypic Optimization Platform (QPOP) and an Artificial Intelligence-based Platform (CURATE.AI)
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A tri‐level approach for coordinated transmission and distribution system expansion planning considering deployment of energy hubs.

Autoři: Allahvirdizadeh, Yousef Shayanfar, Heidarali Moghaddam, Mohsen Parsa

Zdroj: IET Generation, Transmission & Distribution (Wiley-Blackwell). Oct2022, Vol. 16 Issue 19, p3966-4006. 41p.

Témata: *INDEPENDENT system operators, *MARGINAL pricing, RADIAL distribution function, PHOTOVOLTAIC cells, WIND turbines, NUMERICAL analysis

Effects of a Complex Feed Additive on Productivity and Blood Parameters of Laying Hens Using Stochastic Fractal-based Neural Network Model.

Autoři: Karpenko, Larisa Yu. Bakhta, Alesya A. Babich, Olga O. a další

Zdroj: Poultry Science Journal. Jun2025, Vol. 13 Issue 2, p245-258. 14p.

Biomedical knowledge graph construction of Sus scrofa and its application in anti-PRRSV traditional Chinese medicine discovery.

Autoři: Cui, Mingyang Hao, Zhigang Liu, Yanguang a další

Zdroj: Animal Diseases. 1/12/2024, Vol. 4 Issue 1, p1-15. 15p.

Témata: Knowledge graphs, Chinese medicine, Wild boar, Aujeszky's disease virus, Porcine reproductive & respiratory syndrome, Salvia miltiorrhiza

Computational Techniques for the Analysis of Large Scale Biological Systems

Autoři: Ahn, Tae-Hyuk

Thesis Advisors: Computer Science, Sandu, Adrian, Zhang, Liqing, Tu, Zhijian Jake, Baumann, William T., Shaffer, Clifford A.

Témata: Stochastic simulation algorithm (SSA), Parallel load balancing, Cell cycle, RNA-Sequencing, Stochastic differential equations (SDEs)

Popis souboru: application/pdf

Dostupnost: http://hdl.handle.net/10919/77162
http://scholar.lib.vt.edu/theses/available/etd-08172012-094352/